Marasmius oreades (fairy-ring mushroom): E1B28_012543
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Entry
E1B28_012543 CDS
T08156
Symbol
PRPF8
Name
(RefSeq) Pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_012543 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
more03041
]
E1B28_012543 (PRPF8)
Spliceosome [BR:
more03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
E1B28_012543 (PRPF8)
Complex C
U5 SnRNP specific factors
E1B28_012543 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
66081618
NCBI-ProteinID:
XP_043005033
UniProt:
A0A9P7UNC2
LinkDB
All DBs
Position
8:complement(1816928..1830735)
Genome browser
AA seq
2288 aa
AA seq
DB search
MSFPPPPPGFMPPPPPGMNQAPSNGISGSKLPPEVIAHKSMKWVQMQRKRYGEKRRGGYV
DMGKQDLPPEHVRKIIKDHGDMSNRKFRNDKRVHLGALKYVPHAVMKLLENIPYPWEQVR
EVPVLYHITGAITFVNEIPRVVEPVYHAQWSTMWLAMRREKRDRRHFKRMRFPPFDDEEP
PLDYGDNVLDVEPLEAIQLELDEEEDSAIIDWFYDPKPLIDTPHVNGSSYKYWSLSLPIM
ANLYRLGRTLLSDQPDKNASFLFDKKSFFTAKALNMAIPGGPKFEPLYRDMDNFDEDWNE
FNDINKVIIRQQIRTEYKVAFPHLYNSLPRSVKISPYHYAKNVYIRTDDPDLPAFYFDPL
INPISLRGYTPKNMPLVSHEDSIFGPNGADDDFFELPEEVDPFLRDKDIENDMTADGIAL
WWAPEPYSRRSGRMRRAQDIPLVKNWYLEHCPPNQPVKVRVSYQKLLKCYVLNELRTRPE
KAMTKKNLFRQLKATKFFQTTKLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNMNL
KPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQFRLGNVDAFQLADALQYIFAH
IGALTGMYRYKYKLMRQVRMTKDLKHLIYYRFNTGPVGKGPGNGFWAPGWRVWLFFMRGI
VPLLERWLGNLLARQFEGRNSKGIAKTVTKQRVESHYDLELRAAVMHDILDMMPESIKQN
KAKTILQHLSEAWRCWKANIPWKVPGMPTAIENIILRYIKSKADWWCSVAHYNRERIRRG
ATVDKAVVKKNLGRLTRLYLKAEQERQHAYLKDGPYISAEEAVAIYTATVHWLESRKFAP
IPFPPLSYKHDTKLLVLALEKLKEAYSVKGRLNQSQREELALIEQAYDNPHECLSRIKRL
LLTQRAFKESGIEFFDTYDKLIPCYDIEPIEKITDAYLDQFLFFEAEKRGLFPAWIKPAD
TEPPPLLVYKWCQGINNLTEIWETSEGECNVMMETVLSKVYEKIDLTLLNRLLRLILDHN
LADYITAKNNTVLTYKDMAHTNAFGLIRGLQFSAFVFQYYGLVLDLLILGLQRASEMAGP
PQMPNNFLQYRDSATETRHPIRLYSRYVDRLHILFRFNADEARDLIQRYLSANPDPTNNN
VIGYNNKRCWPRDCRMRLIKHDVNLGRAVFWNVKQSLPRSLTTIEWEDTFVSVYSKDNPQ
LLFSMCGFEVRILPKIRTMSGEQFSLKDAVWNLTNEQTKERTAQAFLRVSDEGVQQFNNR
IRQVLMSSGSTTFSKIVNKWNTALIGLMTYYREAVIHTNELLDSLVKAENKIQTRVKIGL
NSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVAVTHFRAGMSHEEDQ
LIPNLYRYLQPWEAEFLDSARVWSEYSMKRKEANAQNRRLTLEDLEDSWDRGIPRINTLF
QKDRHTLAYDRGWRVRTDWKQYQLLKHNPFWWTSQRHDGKLWQLNNYRVDVIAALGGVEG
ILEHTLFKGTYFPTWEGLFWEKASGFEESMRYKKLTNAQRSGLNQIPNRRFTLWWSPTIN
RANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEP
LQIETVQKETIHPRKSYKMNSSCADILLFSAYKWNISRPSLVTDVKDVLDGTTSNKFWID
VQLRWGDFDTHDIERYTRAKFLDYVSDSMSIYPSPTGVMIGMDLAYNLWSAYGNWFPGMK
PLIQQAMAKIMKANPACHVLRERIRKGLQLYSSEPTEPYLNSQNYSELFSNQIIWFVDDT
NVYRVTIHKTFEGNLTTKPINGAIFIFNPRSGQLFLKVIHTSVWAGQKRLGQLAKWKTAE
EVAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACMKMEKFG
DLILRATQPQMVLFSLYDDWLKSISSYTAFSRLILLLRGLHVNNEKGKIILHPDKNTITE
PHFVWPTLSDEEWIKVEVAMKDLILADFGKRNSVNIASLTVSEIRDIILGQEIAAPSVQR
QQMAELEKSSEAQAQVTAVQTQTTNVHGDTIQVVTTTNYEQQVFSSKSDWRVRAISATHL
PLRLQHIYVSNDDVKDDAASYTYVLPKNILRAFITAADLRTQVAAYLYGVSPPDNKQVKE
VKAIAWIPQRGSNNNVELPSQLPKEDFLLKDLEPLGWIKTQALEINHLSPTDVTTQAKIM
ADHPEWSSASICITASFTPGSVSLSAHSLTVPGFDWGRKNVDTSANPPVRPIFYSLSSLL
IHRPNSGL
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atgagctttccaccaccaccacctggctttatgcctccacctccccctggaatgaaccaa
gctccttcaaatggcatttcaggatcaaaattacccccagaagtcatcgcccacaagtcg
atgaaatgggtacagatgcagaggaagagatatggagagaaacgtaggggaggatatgta
gatatggggaagcaggacttacctcccgaacatgttcgtaaaatcattaaagaccacgga
gacatgagcaacagaaagtttcggaatgataaacgcgttcatttaggagctttgaaatac
gttcctcacgccgtcatgaaattactcgagaacattccttatccttgggagcaggtgcgc
gaagtaccggttttgtaccacattaccggtgctatcactttcgttaacgaaattccgcgt
gtcgttgagcccgtctatcatgcacaatggagtactatgtggctcgcaatgcgtcgagaa
aagcgtgatcgtcgtcacttcaaacggatgcgtttccctccattcgacgatgaggaacca
cctttggactacggtgacaatgtccttgatgtcgagccgctcgaagccattcagctggag
cttgacgaagaagaggactcggctattattgattggttttatgaccctaaacctcttatc
gacacacctcacgtcaatggttcctcatataaatactggtcactatctttaccgataatg
gccaacctttaccggctcggcagaactttactttctgaccaaccggataaaaatgccagt
tttctcttcgacaagaagtcgtttttcactgcaaaagctctgaacatggccataccaggt
ggtcccaagtttgagccactctatcgcgacatggacaatttcgacgaggattggaacgag
ttcaatgatatcaacaaggtcatcattcggcaacaaatcagaacggagtacaaggttgct
ttccctcatctgtacaactccctaccccgttccgttaaaatatctccttaccattacgcc
aaaaacgtgtatattcgtaccgatgaccccgacctccctgccttctacttcgaccctctc
atcaatcctatctcgcttcgtgggtacacccctaagaacatgcccctcgtttcacatgaa
gactcgatatttggaccaaatggcgccgatgatgacttttttgaattacccgaggaagta
gacccgttccttcgggacaaagacattgagaatgacatgaccgctgatggtatcgccttg
tggtgggcgccagagccttacagtcgtcgttctggaagaatgcggcgagctcaagatatt
ccgttggtcaagaattggtacctggagcattgcccacccaaccaaccggtcaaggtccgg
gtttcgtatcagaaacttttgaagtgctacgtcctaaacgaactcaggacacggccggag
aaggcgatgaccaagaagaacttgttccgtcaactcaaagcgacgaaattttttcaaacg
accaagttggactgggtggaagctgggttacaggtgtgcaggcaagggtataatatgttg
aatctgttgatccaccgaaaaaatttgaactaccttcacctggactacaacatgaacttg
aaaccggttaagactctgacgacgaaggaaaggaagaagtcgcgttttggcaacgctttc
catctttgccgtgaaatccttcggttgacgaaattagtggtcgatgcccatgttcagttc
cgtctaggaaatgtcgacgccttccaacttgcagacgctctccagtatatcttcgctcac
atcggtgcattgactggaatgtaccggtataagtacaagttgatgaggcaagtccgaatg
accaaggacttgaaacatttgatatactatcgcttcaatactggtccagtaggaaaggga
ccgggcaatggtttctgggcacccggttggcgtgtgtggttattctttatgagaggtatc
gttcctctattggagagatggcttggtaacctccttgctcgtcaattcgaaggccgaaac
agcaaaggaattgccaagactgtcacgaagcaacgagtggaatcacattatgacctcgag
ttgcgagcggctgtcatgcacgatattcttgatatgatgcctgaatcaattaaacagaat
aaggcgaagacgattttgcaacatctgtccgaagcctggcgatgttggaaggcgaatatt
ccgtggaaagtaccaggcatgccgactgcgatcgagaacatcatccttcgttatattaag
agcaaggcggattggtggtgttcagttgctcattataaccgagagcggattcgacgcggt
gcgactgtcgacaaagctgtcgtgaagaagaatctaggtcgtcttactcgactatacctc
aaagctgaacaagagcgccaacacgcttacctcaaggacggtccatacattagtgcagaa
gaagcggttgccatctataccgcaaccgttcattggctggagagtaggaaatttgctccc
attcctttcccgccattgtcctacaagcacgacacgaagcttctcgttttggctctcgaa
aaactcaaagaagcttactcagtcaagggtcgtctcaaccaatcacagcgagaagagctc
gcgctcattgaacaagcatacgataaccctcacgaatgtttatctcgaatcaagcgtctt
ttattgacgcaacgagcattcaaagaatctggaatcgagttcttcgatacatacgacaaa
cttatcccgtgttacgatatcgaaccaatcgaaaagattaccgacgcttatctcgaccag
ttcctcttcttcgaggccgaaaaacgtgggctcttccctgcctggatcaaaccagctgat
acagaacccccaccacttcttgtttacaaatggtgtcaaggtatcaataaccttacggag
atttgggagacaagcgaaggcgaatgcaatgtcatgatggagacagttttatcgaaggtg
tatgagaaaatcgatctcacactgctgaatcgtctattgcgtctcatactagatcacaat
ttggctgactacataacggccaagaacaatactgttcttacatataaagatatggcccat
acaaatgcattcgggttgattcgtggcttacaattctcggcgttcgtcttccagtactat
gggctggtattggatctgttgattctgggtcttcaacgagccagcgaaatggccggacct
cctcagatgcccaacaacttcttgcaataccgggattccgcgaccgaaactcgacacccc
atccgactgtactctcgttacgttgaccggttacacattcttttccgtttcaatgccgac
gaggctagggatctcatccagcgatatctctccgccaatcccgatcctaccaacaataat
gtcatcggatataacaacaaacgatgttggccacgcgactgtcgaatgagactcatcaaa
cacgacgtcaatttaggtcgtgctgtattttggaatgtgaagcagagtctcccgaggtct
ttgaccaccatcgaatgggaggacacgtttgtcagtgtttactctaaggataaccctcag
ctgctgttctcgatgtgtggattcgaagtccgtatccttcccaagatccggacaatgagt
ggagaacaattttccctcaaagatgctgtatggaatcttaccaacgagcagaccaaggaa
agaaccgcgcaagctttcttgcgtgtctcggatgagggtgtccaacaattcaacaacagg
atacgacaagtgttgatgagctctggttccacaacgttttccaagatcgtgaacaagtgg
aacacggccttgatcggtctgatgacctactatcgtgaagcagtcatccacacaaatgaa
cttctcgattcccttgtcaaggcagagaacaagattcagactcgtgtcaagatcggtttg
aacagtaagatgccgtcacgtttcccgccggttgttttttatacccccaaggagctgggc
ggcctcgggatgctttcaatgggccacgtcttgatacctcaaagtgacctccgatggtcc
aaacagaccgacgttgctgtgacacatttccgggctggaatgtctcacgaagaagatcag
ctcatccctaacctgtaccgctacttacaaccatgggaagccgagtttctggattccgcg
cgggtgtggtcggaatattccatgaagcgaaaagaagctaacgctcagaatcgacgactc
actcttgaagacctcgaggatagttgggatcgtggtattcctcgcatcaacactctattc
cagaaggatcgccacaccttggcctatgaccgcggttggagagtacggacagactggaaa
caatatcaactgttgaaacacaatcctttctggtggacatcacagcgtcacgatggcaaa
ctttggcagcttaacaattatcgtgtcgatgtgattgccgccttagggggtgtcgagggc
attttggaacacactctattcaagggtacatatttccctacttgggaaggtttgttctgg
gagaaagcctctggttttgaggagtcaatgaggtacaagaagctgaccaatgcccagcgt
tctggtctcaaccagatccctaatcgtcgcttcacgctttggtggagtcctacgattaat
cgtgccaatgtctatgtcggtttccaagtgcagcttgacttgactggaattttcatgcat
ggcaaaatccctacccttaaaatcagtttgattcagatcttccgtgctcacttatggcag
aaaattcacgagagtgtggttatggatttgtgtcaagtatttgatcaagaactcgaacca
ctacagatcgagaccgtgcagaaggaaacgattcatcctcgtaaaagttataagatgaac
tcttcttgtgccgacatcctgcttttctccgcctacaagtggaacatatcgaggccctct
ctggttactgacgtgaaggacgtcctcgacggtaccacaagtaacaagttttggattgac
gtccagttgaggtggggagattttgatacccacgacattgagcggtacactcgcgcgaag
ttcctggattatgtttctgattccatgagcatatacccttcgccgaccggtgttatgatt
ggtatggatttggcgtacaatttatggtcggcgtatgggaactggttccctggcatgaaa
cctctcatccaacaagcaatggccaaaatcatgaaagccaatcctgcgtgccacgtcctg
agagaacgtattcggaaaggtttacagctatactcgtcggaacccacagaaccgtacttg
aacagtcaaaattattcggagctcttttcgaaccagatcatatggttcgtggatgataca
aacgtctaccgtgtcacaatccacaagacctttgagggcaacttgaccaccaaacctatc
aatggtgctatcttcatattcaaccctcggtccgggcaactattcttgaaagtcatccac
accagtgtctgggctggtcaaaaacgtcttggacaacttgctaagtggaagaccgccgaa
gaagttgcagctctggtccggtccttaccggtagaagagcagcccaagcaagtaatcgtg
actcgtaagggaatgttggatcccttggaggtgcacctactcgatttcccgaacattgtt
atcaagggaagtgaacttcaactaccatttcaagcttgtatgaagatggaaaagttcggt
gatcttattctacgagctactcaaccgcaaatggtgttgttcagtctttacgatgattgg
ctcaagtctatctcgagttacacggccttctctcgccttatcctgcttctgcgtggtcta
catgtaaacaatgagaaggggaaaatcatactccacccagacaagaatacaatcactgaa
cctcacttcgtctggccgaccctcagcgatgaggagtggatcaaggtagaagtcgcaatg
aaagaccttatccttgcggatttcggcaagcgaaacagcgtcaacattgcttctttaacc
gtcagtgaaattcgtgatatcattcttggtcaagagatcgcggcaccgtcggtccagcgg
caacaaatggcagaactggagaagagctccgaagctcaagctcaagtcactgctgtgcaa
acgcaaacgacgaatgttcacggggacacaattcaagttgtgacgacaacgaattatgaa
caacaagtcttcagtagtaaatccgactggcgtgttcgtgcgatttccgccacacatctc
ccactccgccttcaacatatctatgtgtcgaatgacgatgtcaaggacgatgctgcctcc
tacacttacgttcttcccaagaacatcctacgtgctttcattacagcagcggatctgcga
actcaggttgccgcgtacctttatggagtctcgccccccgataataaacaggttaaggaa
gttaaggcaattgcatggatccctcagagaggaagcaataataacgtagaattgccctct
cagttgcccaaggaagacttcctactcaaagatcttgagcccctcgggtggattaagact
caggctctggagatcaaccatctgtccccaacggatgtaaccactcaggcgaagattatg
gcggatcacccggaatggagttcagcgtcgatctgcatcacagcatccttcacaccaggt
tccgtttcactgtcagctcattctcttaccgtccctggctttgactggggtagaaagaac
gttgatacttctgccaaccctccggtgcgccctatcttttactctctctcctcccttctg
atacatcgtcctaattcagggctttaa
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integrated database retrieval system
