Marasmius oreades (fairy-ring mushroom): E1B28_013413
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Entry
E1B28_013413 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_013413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_013413
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
E1B28_013413
mRNA degradation factors
3'-5' decay
Pan complex
E1B28_013413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
66082488
NCBI-ProteinID:
XP_043003918
LinkDB
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Position
9:complement(1577555..1580358)
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AA seq
617 aa
AA seq
DB search
MAYFTRPSSASAAVKIVKPNTPDESSSVQLSARKDSVQRQCRNVLIYGYCKFEDKGCVYY
HPMSEVPHQPTLTESPGTVSSISAQAVNAPVFIPKSSAINPMSSPSPSPPEYRTIQEQYG
YESGNGGVGETSIQTDAEFDDYPVHQDMSFYAASGQFLIREPLDYHLYTSTIPPSFVSSS
TGCHFVPPSSELRELLQARSEEVRGAPPVGQGLSEEIQGYHTLTPLNTTNSSDKRKLFNW
SFVVYRAIHRSDGIPYALLRVENFRLMQQAAFNSIEAWSKIRHPNIVSVHEAFTTRSFND
NSLVVAYSYYAQAETLYDAHMKPKLSYQGNYQGHPQQPPPLVAIPERVLWSYIIQIASAI
MRVHEAGMAVRTIDATKILLTGKNRIRISSCGVIDVLLYETPQDVHYLQQEDLSQFGRLV
FALACNNSNAAATTNFQKSLDHMSRMYSHDIKTAALFLISKSTPHKVKNISRLYEIIGSR
ITTELDDALEATDRLEHELTGELENARLFRLMCKFNFINERPEFALDPRWSETGDRYIVK
LFRDYVFHQVDEHGNPVTNLSHVLTCLNKLDAGSHEKIMLVARDEQSCLVVSYRDIKACM
ESAFHELARPSGSSVSR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcctacttcacaagacctagttctgcttcagcagctgtaaagattgttaaaccaaat
accccagacgaatcttcctctgttcaactatccgctcggaaagattccgttcaacgccaa
tgtagaaatgtattgatttatggttattgtaaattcgaagacaagggctgtgtatactac
catcctatgtcagaggtccctcaccaaccaacactgacagaatcgcccggcacagtctct
tctatctcagcacaagcggtcaatgcaccagtctttattcccaaatcatcggccattaat
cccatgtcatcaccttcgcccagtcctcctgaatatcgaacaatccaggagcaatatggg
tatgagtcgggaaacggtggagtaggggagacatccattcaaacggatgctgaatttgac
gactatcctgtacatcaagacatgtctttttacgctgcctccggtcaattccttatacgt
gaaccgctggattatcatctttatacttccactatcccaccttcctttgtttcctcttct
actggctgtcactttgtacctccatcatctgaactacgagaacttctccaagcccgtagt
gaagaagttcgcggtgcaccaccagttggccaagggctttccgaggagattcaaggatat
cacaccttgacacctctcaatactaccaattcatcagacaaaagaaagctgtttaactgg
tctttcgtggtctatcgagccatccataggtcggatggcataccctacgctctccttcgg
gttgaaaactttcgattaatgcaacaagccgctttcaattcaattgaagcttggtctaag
attcgacatcctaacattgtttccgttcacgaagcgttcacaacccggtccttcaatgat
aactcactcgtcgtcgcgtattcctattatgcacaggctgagactttgtatgatgcacat
atgaaacccaagttatcatatcaaggcaactatcaaggacatccgcaacagccacctccg
ttggtggccatccctgaacgcgtactgtggtcatacatcattcagattgcctccgcaatc
atgagggtacacgaagctggaatggccgtgagaacaatcgatgccactaagatattgtta
acaggaaagaatcgaatccgaatcagctcatgtggtgtgatagacgtcttgctgtatgaa
actcctcaggacgtccactatctgcaacaagaagatctgtcccaattcggccgcctggtt
tttgcgcttgcttgcaacaattccaacgccgctgctaccactaattttcaaaagagtctg
gaccacatgagtcgaatgtatagccacgatatcaaaaccgctgctctatttttgatcagc
aagagtacccctcacaaggtcaagaatatcagtcggttgtacgaaatcattgggagccgt
attaccacggaactcgatgatgcccttgaagctaccgatcgtttagaacacgagctcaca
ggagagctagaaaacgctcgattattcaggttgatgtgcaagttcaatttcatcaacgaa
cggcctgagttcgcactcgatccaaggtggtccgagactggggatcgatacattgtcaaa
ctattcagggactacgttttccaccaagtcgatgagcatggcaatccggtgacgaatcta
tctcacgttcttacctgtcttaacaagctcgatgctggaagccatgaaaaaattatgcta
gttgcacgcgatgaacaaagctgtctcgtcgtcagttatcgagatattaaggcttgtatg
gagtctgcgtttcacgaattggcccgtccttcaggttcttcggtctcgagatga
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