KEGG   Marasmius oreades (fairy-ring mushroom): E1B28_013545
Entry
E1B28_013545      CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K10740  replication factor A3
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03030  DNA replication
more03420  Nucleotide excision repair
more03430  Mismatch repair
more03440  Homologous recombination
more03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E1B28_013545
   03420 Nucleotide excision repair
    E1B28_013545
   03430 Mismatch repair
    E1B28_013545
   03440 Homologous recombination
    E1B28_013545
   03460 Fanconi anemia pathway
    E1B28_013545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:more03032]
    E1B28_013545
   03400 DNA repair and recombination proteins [BR:more03400]
    E1B28_013545
DNA replication proteins [BR:more03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    E1B28_013545
DNA repair and recombination proteins [BR:more03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     E1B28_013545
   MMR (mismatch excision repair)
     E1B28_013545
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     E1B28_013545
SSDB
Motif
Pfam: Rep_fac-A_3 Cas9_b_hairpin DUF7636
Other DBs
NCBI-GeneID: 66082620
NCBI-ProteinID: XP_043004063
UniProt: A0A9P7RQE4
LinkDB
Position
9:2054524..2055223
AA seq 113 aa
MEEQQSSPRVNSALLGKYTGRRVRLTGKVLNVNQAAKRALILASDGGEVSVQFHAENPGL
DTTFVEIVGTVVDVTTIRQLIAIKMSDNLDLTVVDRAVKMAQEARFAELFTLP
NT seq 342 nt   +upstreamnt  +downstreamnt
atggaagaacaacaatcatccccgcgcgtcaactctgctttgctcggaaaatacaccgga
agaagagtgagattgacgggcaaagtgctgaacgttaaccaagccgccaaacgcgcccta
attctggccagtgatggaggagaagtcagtgttcaattccatgcggagaaccccggacta
gacacgacctttgttgaaatcgtagggactgttgttgatgtaaccacaatacgacaacta
attgcaatcaagatgtctgataacctggatctcactgttgtggatagagccgtgaaaatg
gcccaagaagcaagatttgcagagttgttcacactaccatga

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