Microtus oregoni (creeping vole): 121432464
Help
Entry
121432464 CDS
T08307
Symbol
Cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121432464 (Cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121432464 (Cpsf3)
03019 Messenger RNA biogenesis [BR:
morg03019
]
121432464 (Cpsf3)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121432464 (Cpsf3)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121432464 (Cpsf3)
U7-dependent histone pre-mRNA processing factors
121432464 (Cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
121432464
NCBI-ProteinID:
XP_041486388
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVILEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHIYSKRLEVMLQDIFGEDCVSVKDDSVLSVTVDGKTANLNLETRVVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgattcctgcagaggagagcgaccagctgctgatccgaccccttggcgctggg
caagaagtgggaagatcatgcattattttggagttcaaagggagaaaaatcatgctggac
tgtgggatccaccctggcctggaaggaatggatgctcttccttacattgacctcatcgac
cccgctgagatcgacctcttgctaatcagtcacttccatttggatcactgtggggcgctg
ccctggttcctccagaaaacaagcttcaaaggacggacatttatgactcacgccacgaag
gctatttacagatggctcctctcagactacgtcaaagtcagcaacatatcagcagatgac
atgctgtacacggagacggacttagaagaaagtatggacaaaatcgaaaccatcaacttc
catgaagttaaggaggtcgcgggaatcaagttctggtgttaccatgctggccacgtcctg
ggagcggccatgtttatgatcgagattgcaggtgtgaagctgttgtatacaggcgatttt
tcaagacaagaagatagacatctcatggctgctgaaattcctaatattaagccagacatt
cttattattgaatctacctatgggacccacatccatgagaagcgcgaagagcgagaagca
agattctgcaacactgtgcatgacattgtcaacagagggggccgggggctcattcctgtc
tttgctctcggacgagctcaggagctgctactaattctagacgagtactggcagaaccac
ccagagctgcatgacattcccatttactacgcatcctctctcgccaagaagtgcatggcg
gtgtaccagacctacgtgaacgccatgaacgacaagatccggaagcagatcaacatcaac
aaccccttcgttttcaagcacatcagcaacctcaagagcatggatcactttgatgacatt
ggccccagtgttgtcatggcctcgccaggcatgattcaaaatggcttatccagagagctg
tttgagagctggtgtacagacaagaggaacggcgtcatcatcgcggggtactgcgtagaa
gggacacttgccaagcacatcatgtctgaacctgaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtcggttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctctgaagccacctcacgtgattctagtccatggggaa
cagaatgaaatggccaggctgaaagcagcgctgatccgggaatatgaagataacgatgag
gtccacatcgaggttcacaatccgcggaacacagaggctgtgaccctgaacttcagggga
gagaagctcgccaaggtcatgggctttttggcagacaagaaaccagaacagggacagcgt
gtctctggaattcttgttaaaagaaactttaattaccacatactttctccctgtgacctc
tccaattacactgacctggccatgagcactgtgaaacagacccaggccatcccatatact
gggccctttaatttgctgtattaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaagcctgccctgaaggtgttcaaaaatattactgtcatccaggagcca
ggcatggtgattctggagtggctggcgaacccctctaacgacatgtacgcggacacagtg
actaccgtgatactggaagttcagtcgaatccaaaaataaggaaaggtgccgtgcagaag
gtctctaagaagttagagatgcatatttacagcaagaggctggaagtcatgctccaggac
atatttggagaagactgtgtcagtgtgaaagatgactctgtcctcagcgtcacagtggac
gggaaaacagcaaatctgaacctggagacgcgggttgtagaatgtgaagaaggaagtgag
gatgacgagtccctccgagaaatggtggagctggccgcccagcggctgtacgaggccctg
acgcccgtgcactga
DBGET
integrated database retrieval system
