Microtus oregoni (creeping vole): 121432788
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Entry
121432788 CDS
T08307
Symbol
Msh6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg01524
Platinum drug resistance
morg03430
Mismatch repair
morg05200
Pathways in cancer
morg05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121432788 (Msh6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121432788 (Msh6)
09162 Cancer: specific types
05210 Colorectal cancer
121432788 (Msh6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
121432788 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
morg03400
]
121432788 (Msh6)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121432788 (Msh6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Arb1
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
121432788
NCBI-ProteinID:
XP_041486854
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFSKSPALGDTKKAAAGALREGGAAAAVSGASASRGRDAAWSETGSEPRPA
AVSASSPEAKNLNGGPRSSAVPAVPDSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTF
IRKKGKSVRVHVQFFDDSPTRGWVNKRMLKPYTGSKSKEAQKGGHFYSSKSEILRAMQRA
DEALNKDKIKRLELAVCDEPSEPEEDETEVQHAAYVSDKSEDDNQSEGEELQPKVQGPRR
SSRQVKKRRIVSDSESDIGGSDVEFKPDTKQEGSSDEMSSGVGDSDSEDLGTLAKGAPKR
KRAMAGQGAFRRKSSRKETPSATKQATRISSETKSTLSAFSAPQNSESQTHISGGGDNNS
GPTIWYHETLEWLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQN
FDLVIFYKVGKFYELYHMDAVIGVSELGLVFMKGNWAHSGFHEIAFGRFSDSLVQKGYKV
ARVEQTETPEMMEARCRKTAHVSKFDRVVRREVCRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFMGQFSDDRHCSRFRTLVAHYPPVQILFEKGN
LSTETKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEEGYFTGKLNEDSGVALPGVLK
SMTSGSDSIGLTPGENSELALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSKMVTTV
RPGAVFTKANQRMVLDAVTLNNLEVFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCA
PLCNPCAISDRLDAVEDLMALPDKITEITDLLKKLPDLERLLSKIHNIGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGLMEDVADDFKSKTLKQVVTLQTKSPEG
CFPDLNTELNRWDTAFDHERARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRS
RLGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDMSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGGDGPMCRPEIL
LPREHRHPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEENGKAYCVLVTGPNMGGK
STLIRQAGLLAVMAQMGCYVPAEVCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASI
LRHATVHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKNV
SVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKA
REFEKMNQSLRLFREVCLASEKPTLDAEAVHRLLALIKEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaagcaccctgtacagcttcttttccaagtccccggcgcttggcgacacc
aagaaggccgcggccggggccttacgcgaaggaggcgccgccgccgccgtctccggggcc
tccgcttcccgcggcagggatgcggcctggagcgagactggatctgagccccggcccgcg
gcggtgtccgcctcgtcgcccgaggcaaagaacctcaacgggggaccgcggagctcggcc
gtgccggcggttcccgacagttcttgtgacttttcaccaggcgatttggtttgggctaag
atggaaggttatccctggtggccttgcctggtttataatcatccctttgatggaacattc
atccggaagaaagggaaatcggttcgtgttcatgtccagttttttgatgacagtccaaca
aggggctgggttaacaaaaggatgttaaagccatatacaggttcaaaatccaaggaagcc
caaaagggaggtcatttctacagttcaaagtctgaaatcctgagggcaatgcaacgcgca
gatgaagccttaaataaagacaagataaagaggcttgagttggcagtgtgtgatgagcct
tcagagccagaagaggacgagacagaggtgcagcatgcagcttatgtatctgataagagt
gaagacgataaccaaagtgaaggtgaagaactgcagcctaaggtgcaggggcctaggcga
agcagtcggcaagtgaaaaagcgaaggatcgtatcagattctgagagtgacattggtggc
tctgatgtagaattcaagccagacactaagcaagaaggaagcagcgacgaaatgagcagt
ggagttggagacagtgatagtgaggacctggggacccttgccaaaggtgctccaaagcgg
aagagagcaatggctggtcagggtgcatttagaaggaaaagttcaaggaaggaaacaccc
tcagccaccaaacaagcgactcgaatttcatcagaaaccaagagtaccttgagtgctttc
tctgcccctcagaattctgaatcccaaacccatattagcggaggaggtgacaacaatagt
gggcccactatttggtatcatgaaactttagaatggcttaagccagaaaagagaagagat
gagcacaggagacgccctgatcaccctgattttaattcttccacactgtatgtgcctgaa
gatttccttaattcttgtactccagggatgaggaagtggtgggagattaagtctcagaac
tttgatcttgttattttttataaggtggggaagttttacgaattgtatcacatggatgcc
gttattggagtcagtgagctgggactagtattcatgaagggcaactgggcccattctggt
tttcatgaaattgcatttggccggttttcagattccttggtgcagaagggctataaagta
gcacgagtggagcagactgagactccagaaatgatggaagcacgatgccggaagacggca
cacgtgtctaagtttgacagagtggtgagaagggaggtttgcaggattatcaccaagggc
acacagacgtacagtgtgctggaaggtgatccctctgagaactacagtaagtaccttctg
agccttaaagagaaagaggaagattcctctgggcacactcgtgtatatggtgtgtgcttc
gttgacacttcactgggcaagtttttcatgggtcagttttcagatgatcgccattgttcc
agatttaggactcttgtggcacactatcctccagtacaaattttgtttgagaaaggaaat
ctctcaacagaaactaaaacagttctgaaaggttcattgtcctcttgtcttcaggaaggt
ctgataccaggttcccaattttgggatgccaccaagactctgagaacactccttgaagaa
ggatattttactgggaagttaaatgaagacagtggtgtagcactgcctggggtacttaaa
agtatgacctcagggtcagattctattggcctgacaccaggagagaatagtgaattggcc
ctctctgctctaggtggttgtgttttctacctcaaaaaatgcttgattgatcaggagctt
ctatcaatggctaattttgaagaatattttcccttggattctaaaatggtcaccacagta
agacccggtgctgtctttactaaagccaatcagcgaatggtgctagatgcagtgacatta
aacaacttggaggttttcctgaatgggacaaatggttctactgaagggactttgctagag
aggcttgatacttgtcatactccctttggcaagcggctcctaaaacaatggctttgtgcc
cccctctgtaacccttgcgctataagtgaccgcttagatgctgtggaagacctgatggct
ttgcctgacaaaatcactgaaattacagacctcctaaagaagctaccagatcttgagagg
ctactgagtaagatccataatattggatctcccctaaaaagccagaaccacccagacagc
agggctataatgtatgaagaaaccacatacagcaaaaaaaagatcattgattttctttct
gctctagaaggattcaaagtaatgtgtaagattatagggcttatggaggatgttgctgat
gattttaagtctaaaacccttaagcaggttgtcactctacagacaaaaagtcctgaaggc
tgctttcctgatctgaacacagagctgaaccgatgggatactgcttttgaccacgagagg
gctcgaaagactggactcattactccaaaggcaggatttgactctgattatgaccaagca
cttgctgacataagagagaatgaacagagtctcctggagtacttagataaacagcgcagt
cggcttggatgcaggaccatagtctactggggaattggtaggaaccgttaccagttggag
attccagagaattttactacccgcaacctaccagaagaatatgaattgaaatctactaaa
aagggctgtaaacgatactggaccaaaacgattgagaagaagttagctaatcttataaat
gctgaagaacgtagggacatgtctttgaaggactgcatgaggcggctgttctataacttt
gataaaaattacaaggactggcagtctgctgtagagtgcattgcagtattggatgtctta
ctgtgcttggctaactatagtcaaggaggagatggtcccatgtgtcgcccagaaattcta
ttaccgagagaacacagacaccccttcttagagcttaaagggtcacggcatccctgcatt
accaagactttttttggagatgattttattcctaatgacatcctgataggctgtgaagaa
gaagaagaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaaa
tctacactcataagacaggctggtctattggctgtaatggcccagatgggttgttatgta
cctgctgaagtgtgtcggctcacaccagtagatagagtgtttactagacttggtgcctca
gataggataatgtcaggtgaaagtacattttttgttgaactgagtgaaactgccagcata
cttaggcacgcaacagtacattctttggtgcttgtggatgagttaggaagaggtactgca
acttttgatgggacagcaatagccaatgcagttgttaaagaacttgctgaaaccataaag
tgtcgaacattgttttctacacactatcattcattagtagaagactattctaaaaacgtt
tctgtgcgcctaggacacatggcttgcatggtagaaaatgaatgtgaggatcccagccag
gagactattaccttcctctataaattcattaagggagcctgtcccaagagctacggcttt
aatgcagcaaggcttgctaatcttccggaggaggttattcaaaagggacacagaaaagca
agagaatttgagaagatgaatcagtcattacgactatttcgggaagtttgtctggctagt
gaaaagccgactttagatgctgaagctgtccataggttgctggctttgattaaggaattg
tag
DBGET
integrated database retrieval system
