Microtus oregoni (creeping vole): 121433285
Help
Entry
121433285 CDS
T08307
Symbol
Scn3a
Name
(RefSeq) sodium channel protein type 3 subunit alpha isoform X1
KO
K04836
voltage-gated sodium channel type III alpha
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
121433285 (Scn3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
morg04040
]
121433285 (Scn3a)
Ion channels [BR:
morg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121433285 (Scn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
121433285
NCBI-ProteinID:
XP_041487587
LinkDB
All DBs
Position
Unknown
AA seq
2000 aa
AA seq
DB search
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDIDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFETNTTSYFNGTMD
SNGTFVNVTVSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHMEGNHRTEGDRFPKSESEDSVKRRSFLFS
LDGNRLTGEKKLCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRPGERRNSNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLVGGP
SALTSPTGQLLPEGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIASILTNTMEELE
ESRQKCPPCWYRFANVFLIWDCCNAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAME
HYPMTDQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKINEDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVNN
KIRECFRKAFFRKPKVIEIHEGNKIDSCMSNNTGIEISKELNYLKDGNGTTSGVGTGSSV
EKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEESKEKLNATSSSE
GSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGKGKIWWNLRKTCY
SIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWV
AYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNMTTGNTLNVSEVNN
FSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPVYEE
NLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPSNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLSR
INLVFIVLFTGEFVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLF
RVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV
KKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDAIHPGSSVKGD
CGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKF
DPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRV
LGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNYRCYLLKQRL
KNISSKYDKETIKGRIDLPIKGDMVIDKLNGNSTPEKTDGSSSTTSPPSYDSVTKPDKEK
FEKDKPEKESKGKEVRENQK
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggcactgctggtacccccaggacctgagagcttccgccttttcacgcgagaa
tctcttgctgctatcgaaaagcgtgctgcagaagagaaagccaagaagcccaagaaagag
caagacattgacgatgagaacaaaccaaagccgaacagtgacttggaagctgggaagaac
cttccatttatctatggagacattcctccagagatggtgtcggagcctctggaggacctg
gacccctactacgtcagtaagaaaacttttgtggtgttgaataaagggaaggcgatcttt
cgattcagtgccacctccgccttgtacattttaactccgctaaaccccgttaggaaaatc
gctattaagattttggtccactctttgttcagcatgctcatcatgtgcacgattttgacc
aactgcgtgtttatgacattgagtaatcctccggactggacaaagaatgtagagtataca
ttcactgggatctatacctttgaatcccttataaagattttggcgagagggttctgctta
gaagatttcacattccttcgtgacccatggaactggctggatttcagtgtcatcgtcatg
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacgttcagagtt
ctccgggcattgaaaaccatttcagtcattccaggtttaaagaccatcgtgggggccctg
atccagtcggtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagtgtc
tttgcgctaatcgggctgcagctcttcatgggcaacttgagaaataaatgcttgcagtgg
cccccgagtgattctgcatttgaaaccaacactacttcctacttcaacggcacaatggac
tccaatgggacatttgtgaatgtaacagtgagcacgttcaactggaaggattacatcgca
gatgacagccacttttatgttttggatggacagaaagaccctctgctgtgtggaaatggc
tctgatgcaggacaatgtccagaagggtacatctgtgtgaaggctgggcgaaaccccaac
tatggctacacaagctttgacacattcagctgggccttcttatctctgtttcgactcatg
actcaggattactgggagaacctttaccagttgacattacgtgcagctgggaagacctac
atgatattttttgttctggtgattttcttgggctcattttatttggtgaacttgatcctg
gctgtggtggccatggcctatgaggagcagaatcaggccaccttggaggaggctgagcag
aaagaggcggagtttcagcagatgctggagcagctgaagaagcagcaggaggaggctcag
gcggtggctgcagcctcggcggcatccagagacttcagtgggataggagggttaggagaa
cttctggagagttcttcagaagcttccaagttaagctccaagagtgccaaggaatggagg
aaccggaggaaaaaaaggagacagagggagcacatggaggggaaccacagaaccgagggg
gacaggtttcccaagtcggaatccgaagatagcgtcaagcgaaggagcttcctgttctcc
ctggatgggaaccggttgacgggcgagaagaagctgtgctccccccaccagtctctcttg
agcatccgtggctccctgttttccccaagacgcaatagcaaaacgagcattttcagcttc
agaggtcgggcgaaggacgtggggtctgagaatgactttgccgatgacgagcacagcacc
tttgaagatagtgagagcaggagagactcactgtttgtgccgcacagacctggagagcga
cgcaacagtaacgttagtcaggccagtatgtcatccaggatggtgccagggcttccagca
aatgggaagatgcacagcactgtggattgcaatggtgtggtttccttggtgggtggacca
tcagctcttacgtcacctactggacaacttctgccagagggcaccaccactgaaacggaa
gtcaggaagagaaggctcagttcttaccagatttcaatggaaatgctggaagactcctct
ggaagacagagagccatgagcatagccagcatcctgaccaacaccatggaggaacttgaa
gaatctagacagaagtgtccgccatgctggtatagatttgccaatgtgtttttgatctgg
gactgctgcaatgcatggctaaaagtgaagcatcttgtgaatttaattgtgatggatcca
tttgttgatctcgccataacaatttgcattgtattaaataccctgtttatggccatggag
cattatcccatgactgaccagttcagcagtgtgttgactgtgggaaacctggtcttcact
gggatcttcacagccgagatggttctgaaaatcattgccatggacccctattactatttc
caagagggctggaatatttttgacggaattattgttagcctgagtttaatggagcttggc
ctggcaaatgtggaggggttgtccgtgcttcggtctttcagactgctccgagtcttcaag
ttggcaaaatcctggcccacactgaatatgctcatcaagatcatcggcaactcggtgggc
gccctgggcaacctgaccctggtgttggccatcattgtcttcatcttcgccgtggtcggc
atgcagctgtttggaaagagctacaaggagtgcgtctgcaagatcaacgaggattgcaca
ctcccacgctggcacatgaatgacttcttccactcctttctgatcgtgttccgggtgctg
tgtggcgagtggatagagaccatgtgggactgcatggaggtcgcgggccagaccatgtgc
cttattgtgttcatgttggtcatggtgattggcaaccttgtggttctgaacctctttctg
gccttactgttgagctcctttagctcagacaacctcgctgctactgatgatgataacgag
atgaacaacctccagattgcagtgggaaggatgcagaagggaattgattatgtgaacaat
aagatacgggagtgcttccgcaaagccttcttcaggaagcccaaagttatagaaatccat
gaaggcaacaaaatagacagctgcatgtccaataacaccggcatcgagataagcaaggag
cttaattacctcaaggatggtaatggaaccaccagtggagtaggtaccggaagcagtgtt
gagaaatatgtaatcgacgaaaatgactacatgtcattcataaacaacccaagtctcact
gtgaccgtgcccattgccgtgggagagtctgactttgaaaatttaaatacggaagagttc
agcagtgagtcggaactagaagaaagcaaggagaaattaaacgcaaccagctcttcggaa
ggaagcacagttgatgttgctccaccccgagaaggtgaacaggctgaaattgaacctgaa
gaagaccttaaaccggaagcttgctttactgaagggtgtattaaaaagtttcccttctgc
caagtaagtacagaagaaggcaaagggaagatctggtggaatctcaggaagacctgctat
agcattgtggagcataactggttcgagaccttcattgtcttcatgatcctcctcagcagc
ggtgctctggcctttgaagatatatacattgagcagcgaaagaccatcaagaccatgctg
gagtatgctgacaaggtcttcacttacatcttcatcctggagatgcttctcaagtgggtg
gcctatgggtttcaaacctatttcaccaatgcctggtgctggctggacttcctgattgtt
gatgtttctctggttagcctggtagccaatgctcttggttactccgaacttggtgccatc
aaatccctgcggacgctgagagcgctgaggcccctccgagccttatcccgctttgaaggc
atgagggtggttgtgaacgctcttgttggtgcaatcccctccatcatgaacgtgctactg
gtgtgtctcatcttctggctgatatttagtatcatgggtgtgaatctgtttgctggaaag
ttctatcactgtgttaacatgacaacaggcaacacgctgaacgtgagcgaagtcaacaat
ttcagtgattgccaagctcttggcaagcaagcccggtggaagaacgtgaaagtcaacttt
gacaacgtgggggcgggctacctggcgttgctgcaagtggccacattcaaaggctggatg
gatattatgtatgcagctgttgattcgcgggacgtcaaactccagcctgtatatgaagaa
aatctgtatatgtatttatactttgtcatcttcatcatctttgggtcgttcttcactctc
aatctgttcatcggtgtcatcatagacaacttcaaccagcaaaagaagaagtttggaggt
caggacatctttatgacggaagaacagaagaagtattacaatgcaatgaagaaactcggc
tccaaaaaaccacagaagcccatccctcggccttcgaacaaatttcaagggatggtcttt
gactttgtaaccaggcaagtctttgacatcagcatcatgatcctcatctgccttaacatg
gtcaccatgatggtggagactgacgaccagagcaaatacatgaccctggttttgtcccgc
atcaaccttgtattcatcgtcctattcactggggagtttgtgctaaagctcatctccctc
cgatactactacttcactatcggttggaacatctttgactttgtggtggtcattctctcg
atcgtaggcatgtttctggccgagctaatagagaagtactttgtatcccctaccctgttc
cgagtcatccgcctggccaggatcggccgaatcctacgcttgatcaaaggcgccaagggc
atccgcaccctgctctttgctctgatgatgtcccttcctgcgctgttcaacattggcctc
ctgcttttcctggtcatgttcatctacgccatctttgggatgtccaactttgcctacgtt
aaaaaggaagctgggattgacgacatgttcaacttcgagactttcggcaacagcatgatc
tgcctgttccaaatcaccacctcggcgggctgggatggactgctggcccccatcctcaac
agtgcgcctcccgactgtgaccctgatgctattcaccctggaagctcggtgaagggggac
tgtgggaacccatctgtggggatcttcttttttgtcagctacatcatcatatccttcctg
gtggtggtgaacatgtacatcgctgtcatcctggagaacttcagcgtcgccacagaagaa
agcgcagagcccctgagtgaggacgactttgagatgttctatgaggtctgggagaagttc
gaccccgatgccactcagttcatagagttctgcaagctctctgactttgcggctgccctg
gatcctccccttctcatcgcaaagccaaacaaagtccagctcattgccatggatctgccc
atggtgagcggagaccgcatccactgcctggacatcctatttgcttttacaaagcgtgtg
ttgggtgagagtggagagatggatgcccttcgaatccagatggaagatcggttcatggct
tccaacccctccaaagtctcctatgaaccgatcaccaccactctgaaacgcaaacaagag
gaagtatctgctgccattattcagcgcaactacagatgctatcttttaaagcaaaggtta
aaaaacatatcaagtaaatatgataaagagacaatcaaggggaggattgacctgcctata
aaaggagatatggtgattgacaaattaaatgggaattccactccagaaaagacagatgga
agttcctccaccacctctcctccttcctatgatagtgtgacaaagccagacaaggaaaag
tttgagaaagacaaaccagagaaagaaagcaaagggaaagaggtcagagaaaatcaaaag
taa
DBGET
integrated database retrieval system
