Microtus oregoni (creeping vole): 121433534
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Entry
121433534 CDS
T08307
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121433534 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121433534 (Bard1)
04121 Ubiquitin system [BR:
morg04121
]
121433534 (Bard1)
03036 Chromosome and associated proteins [BR:
morg03036
]
121433534 (Bard1)
03400 DNA repair and recombination proteins [BR:
morg03400
]
121433534 (Bard1)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121433534 (Bard1)
Ubiquitin system [BR:
morg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121433534 (Bard1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121433534 (Bard1)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121433534 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT_2
BRCT
zf-RING_5
zf-C3HC4
ANK_LRRK2
zf-C3HC4_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
121433534
NCBI-ProteinID:
XP_041487935
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MPRRPPTVRSGNKPSPALAMEPADDGPWAYSRAALARLERLLRCSRCANILKEPVCLGGC
EHIFCSVCISDCVGSGCPVCYTPAWILDLRINRQLDSMIQLYSKLRNLLHDDKRSDPKDN
TSRADLFGNAERKKNSIKMWFSPRRKKVRYVVSKESMTTQPGKAEGGRTQGASIYDFFST
SPPEVVSKRAKAASRTFAKKQQKKSSAEINQEGNLRPETDDSQFDSKEELKEKVVSCSRT
PVVESPQVHREIDLLASGSAAESECSGGLTQVSLPLAEHIVSPDTVSNEETPEKKVCVKD
LRSREHYENHKGCSRPPSTVSKNCGSNVLSPSGDVIKPAVLAENMLLVDCSSAPSDQFQV
DVTLRRHSNVSDDSLSLSPGVPPPLLNNSTHRQMMPSPSTVKLSPSIMAGKRNHRGETLL
HIASIKGDIPSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKIVELLLQHNALVNTTGY
QNDTPLHDAAKNGHIDIVKVLLSCGASKNAVNIFGERPVDYTDDENIKSLLLPPEKNESF
STSQCSVVTAGQRRNGPLVLIGSGLSSQQQKMLSKLETVLKAKKCAEFDSTVTHVIVPDD
EAQSTLKCMLGILNGCWILTFEWVKACLHSKLREQEEKYEVPGGPQRSRLNREQLLPKLF
DGCYFFLGGNFKHHPKGDLLKLIAAAGGKVLSRKPKPDSDVTQTINTVAYHANPDSDQRF
CTQYIVYEDLFNCRPERVRQGKVWMAPSTWLISCVMAFELLPLDS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaggccgccgaccgtccgctcggggaacaagccttctcccgcgctcgccatg
gagccggctgacgacgggccctgggcctacagccgcgcggcgctcgcccgcctggagagg
ctgctgcgctgctcccgctgcgctaatattctgaaggaacccgtgtgcttaggaggatgt
gagcacattttctgtagtgtttgtataagtgactgtgttggatcaggatgtccagtatgt
tacaccccagcctggatcctagacctcaggataaacagacaattggacagcatgatccag
ctttatagtaagcttcgaaatttgctacatgatgataaacgttcagatcccaaagacaac
acatctagggcagatttatttggtaatgcagaaaggaagaagaattcaattaaaatgtgg
ttcagtcctcgaaggaagaaggttaggtacgtggtgagtaaagagtcaatgacaactcag
cctggaaaggcagagggtggcagaacccaaggagcctccatatatgattttttctctaca
agtccccctgaagttgtttctaagagggccaaagcagcttctagaacatttgcaaaaaag
cagcagaagaaatcttcagctgagattaaccaggaggggaatttaaggccagaaacagac
gatagtcagtttgattccaaagaggaactgaaggagaaggttgtctcctgtagccgaaca
ccagttgtggaaagtccacaggtacatcgtgaaatagacttattagccagtggttctgct
gcagagtctgaatgttcgggaggattgactcaagtctccttaccattggctgagcatatc
gtgtctccagacactgtaagcaatgaagagacgcctgagaagaaggtctgtgtaaaagat
cttcgttcaagagagcattatgaaaatcacaaaggctgcagcaggcctcccagtactgtt
tctaagaattgtgggagcaacgttctgagtcccagtggagatgtcattaaaccagcagtg
cttgcagaaaatatgctgttggttgactgttcttcggcgccttcagaccaatttcaagtt
gatgtcacactcaggagacacagtaacgtatcagatgactccctcagcctttcaccgggt
gtacccccacctctgctgaataattcaactcacagacaaatgatgccaagcccctccaca
gtgaagctgtcacccagtattatggccgggaagagaaatcacagaggagagactttgctt
catattgcttctattaagggtgatataccttctgttgaatacctcttgcaaaatggaaat
gacccaaatgttaaagaccatgctggatggacaccattgcatgaagcctgcagtcatggt
cacctgaagatagtggaattgctgctccagcataatgctttggtgaacaccacaggttat
caaaatgacaccccactccacgatgcggccaagaatgggcacatagatatagtcaaggtg
ttattgtcctgtggtgcctccaagaatgctgttaacatatttggtgaacggcccgtggat
tatacagacgatgaaaatataaaatcattattgctgccaccagagaagaatgaatcattc
tctactagccagtgctcagtcgtgactgctggacagcgaaggaatgggccattggtgctg
ataggcagtggactttcttcacagcagcagaaaatgctcagcaaactcgagacagttctt
aaggctaaaaaatgtgctgagtttgacagtacagtaactcatgtcattgttcctgatgac
gaagctcaaagtactttgaagtgtatgcttgggattctcaatggatgctggattctgacg
tttgaatgggtgaaggcttgtctgcacagtaaactacgtgaacaggaggaaaagtacgaa
gttcctggaggtccacagaggagcaggctcaacagagagcagctgttgccaaagctgttt
gatggatgctacttctttttggggggaaacttcaagcatcatccaaaaggcgacctcctt
aagctcattgctgcagcaggagggaaggtgctcagtagaaagcccaagccagacagtgat
gtgacacagaccatcaacacagtggcataccatgccaaccctgattctgaccagcgcttc
tgcacacagtacatcgtctatgaagatttgtttaattgtcgcccagaaagggttcggcag
ggcaaagtctggatggctccttccacctggcttatcagctgtgtaatggcctttgaattg
cttcctcttgacagctga
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integrated database retrieval system
