Microtus oregoni (creeping vole): 121433833
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Entry
121433833 CDS
T08307
Symbol
Prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121433833 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121433833 (Prpf4)
Spliceosome [BR:
morg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121433833 (Prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
121433833
NCBI-ProteinID:
XP_041488415
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MASSRASSTATKAKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
DSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctctcgagcctcctccacggcaaccaaagctaaagcacctgatgatttagtt
gctcctgttgtgaagaaaccacacatctattacggaagcttggaagagaaagagagggaa
cgtctggccaaaggagaatctgggattttggggaaagaaggactcaaagcaggcattgaa
gccgggaatattaatataacctctggggaagtgtttgaaattgaggagcacatcagtgag
cggcaggcagaagtcttggcagagtttgaaagaagaaagagagcgcggcaaatcaatgtc
tccacagatgactcagaggtcaaggcttgccttcgagccttgggagaacctatcacactt
tttggagagggccctgctgaacgaagagaaaggttaagaaatatcctctcagtggttgga
actgatgccttaaaaaagactaaaaaagatgatgagaaatctaagaaatcaaaagaagag
tatcaacaaacctggtaccatgaaggaccaaatagcctaaaggtggccagactgtggatt
gctaattattcactccccagagcaatgaaacgcttggaagaggcccgtctccataaggag
attcctgagacaaccagaacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagtcagattggagatgatcggccaatctcctactgccactttagtccc
gattctaaaatgctagccacagcttgttggagtgggctctgcaagctctggtctgtgcct
gactgcagcctccttcacactcttcgaggccataacacaaatgtaggagcaattgtattc
caccctaaatctactgtctcattggaccaaaaggatgtcaacttggcctcttgtgctgct
gatggttctgtgaagctctggagtctggacagcgatgagccagtggcagatattgaaggc
catacggtgcgtgtggctcgggtaatgtggcatccgtcagggcgtttcctgggcacgacc
tgttatgaccgttcatggcgcttgtgggatttagaagctcaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgagtttgggacctgcgcacaggacggtgcattatg
ttcctagaaggccaccttaaagaaatctatggaataaatttctcccccaatggctaccac
attgcaactggcagcggtgacaacacctgcaaagtatgggatcttcgacagcgacgttgt
gtctacaccatccctgcccatcagaatttagtgactggtgtcaagtttgaaccaatccat
ggagacttcctgctcactggtgcctatgataacacagccaaaatctggacccatccaggt
tggtccccgttgaagactttggctggtcatgagggcaaagtaatgggcctcgacatttct
tctgatgggcaactcatagccacttgctcgtatgacaggaccttcaaactctggatggca
gagtag
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