KEGG   Microtus oregoni (creeping vole): 121434253
Entry
121434253         CDS       T08307                                 
Symbol
Tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121434253 (Tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:morg03400]
    121434253 (Tdp1)
DNA repair and recombination proteins [BR:morg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121434253 (Tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 121434253
NCBI-ProteinID: XP_041488976
LinkDB
Position
Unknown
AA seq 617 aa
MSAISKLQRSIMTQESSYGRWTISSSDESEDEKPRPDKPSTSSVHRQGAVQGPVYTCSEA
RKVAHKRKLSPVKFSNADSTLPPKRQKSEATEGLGWCLSSSDDEQQLETQHDQPKDMVVQ
EKKRSSSPNMPTAQQVVHHSPPASHGPQRADDEYETSGEGQDIWDMLDTRNPFQFYLTRV
SGIKAKYNSKALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDK
REAKADLEAQAKPYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQ
KTQGIWLSPLYPRVDPAKHTSGESSTHFKADLISYLRAYNLPPLQEWIDAIQEHDLSETN
VYLVGSTPGRFQGSHKDNWGHFRLRKVLRAHAPSVPKDECWPIVGQFSSIGSLGPDESKW
LCSEFKESLLALREDGGTPGKSAAPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQN
WLHSYFHKWSAETSGRSNAMPHIKTYMRPSSDFSKLAWFLVTSANLSKAAWGALEKNGTQ
LMIRSYELGVLFLPAAFGLDTFNVKQKFFSSSCEPMTSFPVPYDLPPELYGSKDRPWIWN
IPYVKAPDTHGNMWVPS
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgtcggcaatctccaaacttcaacgaagtataatgacccaggaaagcagctatgggagg
tggacaatatccagtagtgatgaaagtgaggatgaaaagcccagacctgacaagccgtca
acatcgtctgtccataggcagggagcggtgcaggggcctgtgtacacctgctcagaggcc
cgcaaggttgcacacaagagaaagctttcacctgtgaagttcagcaatgcggactcaaca
ttgccccccaaaaggcagaagagtgaggccacagaaggtctcggctggtgtctgtccagt
agcgatgacgagcagcagctagagacacagcacgaccagcctaaggacatggtggtccaa
gagaaaaaacgttcctcctcgcccaacatgcctaccgcccagcaagttgtccatcacagc
cctcctgccagccatggtccccagagggcagatgatgagtacgagacctcaggggaaggc
caggacatctgggacatgctggatacaaggaaccccttccaattttacctcaccagagtc
tcagggattaaggcaaagtacaactccaaagccctccacatcaaggatattttatcccct
ctgtttggaacacttgtctcttcagctcagtttaactactgctttgacgtggactggctc
ataaagcagtacccaccagaattcaggaagaaaccgatcctgcttgtgcacggagataag
agagaagccaaggcagacttggaagcccaggcaaagccctatgcaaacatttccctctgc
caggcaaagttggatattgcatttggaacacaccacacgaaaatgatgctcttgctctac
gaagaaggcctccgagttgtcattcatacctccaacctcatccgggaagactggcaccag
aaaacccaaggaatatggttgagccctttgtacccacgagttgacccggcaaagcacaca
tccggagagtcaagcacccactttaaagctgacctcatcagttatttgagggcgtacaat
cttccccctctccaggagtggatagacgccatccaggagcacgatctctctgaaaccaat
gtttaccttgtcggttcaacccctggacgctttcaaggaagtcacaaagataactgggga
cattttaggcttaggaaggttctgcgagcgcatgccccatctgtacccaaagacgagtgc
tggcccatcgtgggtcagttttcaagcattggttctctggggcctgatgagtccaagtgg
ctgtgctcagagtttaaagagagcttgctggcactgagagaagatggcggaactccaggg
aaaagtgcagctcctcttcatctgatctatccttctgtggaaaacgtgcggaccagctta
gaaggatatcctgctgggggctcccttccctatagcatccagacagctgaaaaacagaat
tggctgcattcctactttcacaagtggtcagcagagacatctggccggagcaacgccatg
ccacatattaagacatacatgaggccttcatcagacttcagtaaactggcttggtttctt
gttacaagcgcgaatctgtccaaagccgcctggggagcactggagaagaatggcacccag
ctgatgatccgttcctatgagctcggcgtcctcttccttccggcggcatttggcctggac
accttcaatgtgaagcagaaattcttctccagcagctgtgagccaatgacctcctttcct
gtgccctatgacctgcccccggagctctatgggagtaaagatcggccgtggatttggaac
attccctatgtcaaagcacccgatacacatggcaacatgtgggtgccttcttga

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