Microtus oregoni (creeping vole): 121434317
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Entry
121434317 CDS
T08307
Symbol
Dicer1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
121434317 (Dicer1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
morg03036
]
121434317 (Dicer1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121434317 (Dicer1)
microRNA pathway
RISC loading complex
121434317 (Dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
121434317
NCBI-ProteinID:
XP_041489085
LinkDB
All DBs
Position
Unknown
AA seq
1916 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNVSVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCE
EHFSPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDD
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDSAEAD
VDAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSQ
QMLELITRLHQYIFSHILRLEKPALEFKPIGAESAYCVLPLNVVNGSSTLDIDFTFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISTCNSSLAENDNYCKHSTIIVPENAAHQGATR
TSLENHDQMSVNCRRLPAESPGKLQIEVSTDLTAINGLTYNKNLANGSYNLVNRDFCQGN
QLNYFKQEIPVQPTTSYSIQNLYNYENQPKPSNECTLLSNKYLDGNANTSTSDGSPAVST
MPAMMNAVNAFKDRMDSEQSPSVGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNADKWEKDEMTKDCLLANGKLGEDCEEEDLTWRAPKEEAEYEDDFLEY
DQEHIQFIDSMLMGSGAFVKKISLSPFTTSDSAYEWKMPKKSSLGSMPFSSDIEDFDYSS
WDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEA
LLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFSSQQKSLSGSCAAAA
ASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYRFKNKAYLLQA
FTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFA
SLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPK
AMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAK
FSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatactccaagaaaataccaggttgagctgctggaagcggctctggaccataacacc
attgtctgcttgaataccggctcagggaagacgttcatcgcggtcctgctcaccaaagag
ctggcccatcagatcaggggcgacctcaacccacatgcaaaaaggaccgtgttcctcgtc
aactctgcaaaccaggttgctcaacaagtctcagctgtcagaacccactcagatctcaag
gttggggagtattcaaacctagaagtcaatgcatcttggacaaaagagagatggagccaa
gagtttactaagcaccaggttctcattatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttgtcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
attctagaccacccctatcgagaaattatgaagctctgtgaaagttgtccatcatgccct
cgaattttgggactaacagcttcaattttaaatggaaaatgtgatccagaggaattagaa
gaaaagattcagaaactggagaagattcttaagagtaatgctgagactgcgactgacctt
gtggtcttagacagatacacttctcagccgtgtgagattgtggtagattgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgattgtaatgtatctgtacattcaaaggaaagagattctactctgatttccaaa
caaatactctcagattgccgtgcagtgttggttgttctgggaccctggtgtgcggacaaa
gtagccggcatgatggtaagagaactgcagaagtacatcaaacacgagcaagaggagctg
cacaggaagttcttactgtttacagacactttgctgaggaaaatacatgcactgtgtgaa
gagcacttctcacctgcctcacttgacctgaagtatgtgactcctaaagtaatgaaactg
cttgagatcctgcgcaaatacaagccctatgagcgacagcagtttgaaagtgttgagtgg
tacaataataggaatcaggataattatgtgtcctggagtgattctgaggatgatgatgat
gatgaagaaattgaagaaaaggaaaagccagagacaaatttcccttctccatttaccaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgtcctgaacagattg
ataaaggaagctggcaaacaagatccagaactggcttatatcagtagcaactttataact
ggacatggcattgggaagaaccagcctcgcagcaaacagatggaagcagagttcagaaag
caagaggaggtacttcggaaatttcgagctcacgagactaacctgctcattgcaacaagt
gtcgtagaagagggtgtggatattcccaaatgcaacttggtggttcgttttgatttgccc
acggagtatcgatcatatgttcagtctaaaggacgagcacgagccccgatctctaactat
gtgatgttagcagatacagacaagataaagagcttcgaagaagaccttaagacctacaaa
gctatagaaaagatcttaagaaacaagtgttcaaagtcagtggatagtgctgaggctgac
gttgatgccgttgtagatgatgatgatgtgttcccaccatatgtattgaggcctgatgac
gggggtccacgagtcacgattaacactgccattggacacgtcaacagatattgtgctcga
ttaccaagtgatccgtttacacatctagctcccaaatgtagaacccgagagttacctgat
ggtacattttattcaactctttatcttccgattaactcacctcttcgagcctccattgtt
ggtccaccaatgggctgtgtacggttggctgaaagagtggtagctctcatttgctgtgaa
aaactgcacaagattggtgaactggatgaacatttgatgcctgttgggaaagagactgtt
aaatatgaagaagagcttgacttacatgatgaagaggagaccagtgttccaggaagacca
ggatccacaaagcgaaggcagtgctaccctaaagcaattccagagtgtttgagggagagt
taccccaaacctgatcagccttgttacctgtatgtgatagggatggtcttaactaccccc
ctccctgatgaactcaacttcaggagacggaaactctaccccccagaggacactacaaga
tgctttggaatcctgaccgccaaacccatacctcagattcctcactttcctgtgtataca
cgctctggagaggtcaccatatccattgagctgaagaagtctggtttcacattgtctcaa
caaatgcttgagctgattacaagactccatcagtatatattctcacatattcttcgcctg
gaaaaacccgccctagagtttaaacctataggcgctgagtcagcatactgtgttctacct
cttaatgttgttaatggctctagcactctggacattgactttacattcatggaggatatt
gagaagtctgaagctcgtataggcattcccagcaccaagtactcaaaagaaacaccgttt
gtttttaagttagaagattaccaagatgcagttatcattccaagataccgcaattttgat
cagcctcatcgattttacgtagctgatgtgtacactgatcttaccccactcagtaaattt
ccttcccctgaatatgaaacttttgcagaatattataaaacaaagtacaaccttgacctg
accaatctcaaccagccactgctggatgtcgaccacacatcttccagacttaaccttttg
acacctcggcatttgaatcagaaggggaaagcacttcctctaagcagtgctgaaaagagg
aaagccaaatgggaaagtctgcagaacaaacagatactagttccagaactctgtgctata
catccaattccagcatcactgtggagaaaagcagtttgtctccccagcattctttatcgc
cttcactgccttttgactgcagaggagctaagagctcagacagccagcgatgctggtgtg
ggagtaagatcacttcctgcagattttagataccctaacttagacttcgggtggaaaaaa
tctattgatagcaagtctttcatctcaacctgtaactcctcgttggctgaaaatgataat
tactgtaagcacagcacaattatagtccctgaaaatgctgcacatcaaggtgctactaga
acctccttagaaaaccatgaccaaatgtctgtgaactgcagaaggctacctgctgagtca
cctgggaagctccagattgaagtttcaacggatcttacagcaattaatggtcttacttac
aacaaaaatcttgccaatggcagttataatttagttaacagagacttttgccaaggaaat
cagctgaattacttcaagcaggaaatacctgtacaaccaactacctcatattccattcag
aatttatacaattatgagaaccagcccaagcccagcaatgaatgtactctactgagtaat
aaataccttgatggaaacgctaacacatctacctcagatggaagccccgcggtgtccacg
atgcctgccatgatgaatgctgttaatgcattcaaggacaggatggactctgagcagagc
ccttctgttgggtactcctcaaggactcttggtcccaatcctggactgattcttcaggct
ttgacactgtcaaatgctagcgatgggtttaacctggagcggcttgagatgcttggcgac
tcctttttaaagcatgctatcaccacatatctcttttgcacttaccctgatgctcatgag
ggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaacctgtatcgccttggc
aagaagaaggggctgcccagccgcatggtagtgtcgatatttgatcctcctgtgaattgg
cttcctcctggttatgtggtaaatcaagacaaaagtaacgcagataaatgggaaaaggat
gaaatgacaaaagactgtttgctggctaatggcaaactaggtgaggactgtgaggaggag
gaccttacgtggagggctcccaaggaggaggctgaatatgaagacgacttcctggagtat
gatcaggagcacatacagtttatagacagcatgttaatggggtcaggagcctttgtgaag
aaaatttctctttctccttttacaacctctgattctgcttatgaatggaaaatgcccaaa
aagtcctccttaggcagtatgccgttttcctcagacattgaggattttgactacagctcc
tgggatgcaatgtgctatctggatcctagcaaagccgttgaagaggatgactttgtggta
ggtttctggaatccatcagaagaaaactgtggcgttgacacagggaagcagtccatttct
tacgacttgcacacggagcagtgcattgctgacaaaagcatagcagattgtgtggaggcc
ctgctgggctgttatttaaccagctgtggcgagagggctgctcagcttttcctctgttcg
ctgggactgaaggtactcccagtcatcaaaaggaccagccgggaaaaggccctgtaccct
gctcaggagaacttcagcagccaacaaaagagcctttcagggagctgtgctgccgctgca
gccagcccacgttcctctgcagggaaagacttggagtacggctgcctgaagatcccacca
aggtgtatgtttgaccatccagatgcagagaaaaccctgaaccacctgatttctgggttt
gaaaattttgagaagaaaatcaactacagattcaagaataaggcttaccttctgcaggct
tttacacatgcctcctaccactacaacactatcactgattgttaccagcgcttagaattc
ctgggagatgcgattttggactacctcataaccaagcacctttatgaagacccacggcag
cattccccaggggtcctgactgacctgcgctctgccctggtcaacaacaccatctttgct
tcattggctgtgaagtatgactaccacaagtactttaaagctgtctctcccgagctcttc
catgtcattgacgactttgtgcagtttcaacttgagaagaacgagatgcaagggatggac
tctgagcttaggagatccgaggaggatgaggagaaagaagaagatatcgaagtccccaag
gccatgggggacatttttgagtctctcgctggtgccatttatatggacagtgggatgtct
ctggaggttgtctggcaggtgtactacccaatgatgcggccgctaatagaaaaattttct
gcaaacgtgccccgttctccagtgagagaattgcttgagatggaaccagaaaccgccaag
tttagcccagcggagagaacttacgatgggaaggtcagagtcaccgtggaagtggtgggg
aaggggaaatttaaaggtgtcggccggagttataggatcgcaaagtctgctgcagcaaga
agagccctccgcagcctcaaagctaaccagcctcaggttcctaacagctga
DBGET
integrated database retrieval system
