Microtus oregoni (creeping vole): 121434339
Help
Entry
121434339 CDS
T08307
Symbol
Cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121434339 (Cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121434339 (Cpsf2)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121434339 (Cpsf2)
U7-dependent histone pre-mRNA processing factors
121434339 (Cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
121434339
NCBI-ProteinID:
XP_041489128
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYVEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCVSATESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDGPSDSSAIAQQKAMKSLFGDDDKELGEETEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctatcatcaaattaactaccctctccggggtccaagaagagtctgctctttgc
tatcttctccaggttgatgagtttaggtttttgttggactgtggctgggatgaacacttc
tctatggacattattgattccctgagaaagcatgttcaccagattgatgcagtgctcctg
tctcaccccgacccactccaccttggcgccctcccattcgctgtggggaagctgggtctg
aactgcgccatctatgccaccattcctgtttacaaaatggggcagatgttcatgtatgat
ctctatcagtctcgccacaatacggaagattttaccctctttacattagatgatgtggat
gcagcctttgataaaatccagcagctaaaattctctcagattgtgaacttgaaaggcaaa
ggacatggtttgtctatcacacccctgccagctggccatatgataggaggaacaatatgg
aaaatagtcaaagatggagaagaggaaatcgtgtatgccgttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctctctacttatcaca
gattcatttaatgctacgtatgtgcagcctagaaggaaacagagagacgagcagctcctg
acaaatgtcctggaaactcttcggggtgatggaaacgtgctcatagcggtggacacggca
ggccgagttctggagcttgctcagcttcttgatcagatttggagaactaaagatgcaggg
ctgggtgtttattcactggcactcctgaataatgtcagttataacgtggtggagttttcc
aaatcacaggtagaatggatgagcgataaattaatgagatgttttgaagacaaaagaaat
aacccatttcagtttcgccatctctctctgtgccatggtctttctgacttggctcgagtt
ccaagccccaaagttgtacttgccagccagcctgaccttgagtgtggattctcaagggat
ctctttattcagtggtgtcaggacccgaaaaactcaatcattctaacttacagaacaact
cctgggactttagcacgtttcttaattgataatccttctgagaaagttacagaaatagag
ctgaggaaacgcgtgaagcttgaagggaaagaacttgaagaatatgtggaaaaagagaaa
ctaaagaaagaagctgctaagaaacttgagcaatcgaaagaggcagacatcgactccagc
gatgagagtgatgtggaggaagatatcgaccagccttcggctcataagacaaagcacgac
ctcatgatgaaaggggaaggcagtcgcaaaggcagcttcttcaaacaggccaaaaaatcc
taccctatgtttcctgccccagaagaaagaattaaatgggacgaatacggagagatcatc
aaaccagaagatttcttagtgccagaacttcaggctactgaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagatgagcccatggatcaggacctgtctgatgttcccacc
aagtgtgtttctgcaacagagtctattgagataaaagccagggttacttacatagactac
gaaggacgctctgacggagactccattaaaaagatcatcaatcagatgaaaccacggcag
ttgatcattgtccatggcccaccagaggccagtcaggatctggctgagtgctgccgtgca
tttggtgggaaagatattaaagtgtacatgccaaagctacacgaaacagttgatgccaca
agcgaaacgcatatctaccaggtcagattaaaggactcgcttgttagctcccttcagttt
tgtaaagccaaagatgccgagttagcttggatagatggcgtcttagacatgagagtttcc
aaagtggacacaggagttattctggaagaaggagagctcaaggatgatggagaagactcc
gaaatgcaggtggatggcccttcagattccagtgccatagcccagcagaaggccatgaag
agtctgttcggagatgatgacaaggagttgggtgaagagactgagatcatccccaccctg
gagcctttgccgcctcatgaggttcctggacatcagtccgtttttatgaatgagccaaga
ctatctgacttcaagcaagttcttttgcgggaggggattcaagccgaatttgtagggggt
gtacttgtctgcaacaatcaagtagcagtccgcagaacagaaactggacgcatcgggtta
gaaggctgcctttgtcaagacttttataggatacgagaccttttatatgaacagtatgcc
attgtgtaa
DBGET
integrated database retrieval system
