Microtus oregoni (creeping vole): 121435227
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Entry
121435227 CDS
T08307
Symbol
Vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121435227 (Vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
morg01007
]
121435227 (Vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
morg03016
]
121435227 (Vars1)
Enzymes [BR:
morg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
121435227 (Vars1)
Amino acid related enzymes [BR:
morg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121435227 (Vars1)
Transfer RNA biogenesis [BR:
morg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121435227 (Vars1)
Prokaryotic type
121435227 (Vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Jag_N
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
121435227
NCBI-ProteinID:
XP_041490332
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGDGPGWGGPHPRICLQPPPSSRTPLPPPRLPAL
EQGPGGLWVWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELVPAACGATLPALG
LRSPGQDPQAALGALGKALSPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPAV
RRIWGNVTRWFNTCVRQPEFRAVLGEVVLYSGARSVPQQPGLEVTAPPKTAAQLKKEAKK
REKLEKFQQKQKAQQQPPPGEKKPKPEKKEKKDPGVITYDLPTQPGEKKDVSGTMPDSYS
PQYVEAAWYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQ
DCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGVNRHQLGREAFLQEVWKWKE
EKGDRIYHQLKKLGSSLDWDRACFTMDPKLSVAVTEAFVRLHEEGVIYRSTRLVNWSCTL
NSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETM
LGDVAVAVHPKDSRYQHLKGKSVIHPFLSRSLPVVFDDFVDMEFGTGAVKITPAHDQNDY
EVGQRHGLEAISIMDSKGALVNVPAPFLGLPRFEARKAVLAALKERGLFRGIKDNPMVVP
LCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCI
SRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAREKAAREFGVSVDKISLQ
QDEDVLDTWFSSGLFPFSILGWPNQSEDLNVFYPGTLLETGHDILFFWVARMVMLGLKLT
GRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPTEVEK
AKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFAL
RGLGKSFVPLQTSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYE
LCDVYLECLKPVLNGVDETAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPA
APASLCITPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRTRPDCFLEVADE
ATGALASAVSGYVQVLASAGVVAVLALGAPAPQGCAVAVASDRCSIHLQLQGLVDPAREL
GKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEAKLQQTEAELRKVDEAIALFQ
KML
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcaccccgacgccttccccagcctccgagccctcatc
gccgcccgctacggggaagccggcgacggccccgggtggggaggcccgcacccccgcatc
tgcctgcagcctcccccgagcagccggactccgctgccgccgcctcgcctgcccgccctg
gagcaggggcccggcgggctgtgggtgtggggcgccccggctgtggcgcagctgctgtgg
ccggcaggcctggggggtcccgggggcagccgggcggccgtcctcgtccagcagtgggtc
agctacgccgacaccgagctcgtgccggcggcctgcggggcgacgctgcccgcgctggga
ctccggagtccggggcaggatccccaggctgccctgggtgccctgggcaaggccttgagc
cccttggaggactggcttcggctgcacacctacctggccggggatgcgcccactctggca
gacttagctgccgtgacagccttactgctgcccttccgatacgttctggaccccgctgtc
cgccggatctggggtaatgtgactcgctggtttaacacttgtgtccggcaaccggaattc
cgggctgtgctaggagaagtggtcctgtactcgggggccaggtctgtccctcaacagcca
ggtcttgaagtcactgcacccccaaaaacagctgctcagctcaagaaagaagcaaagaaa
cgggagaagctagagaaattccagcagaagcagaaggcccagcagcagcccccaccaggg
gagaagaaaccaaaaccagagaagaaggagaaaaaggaccctggggtcattacctatgac
ctccctacccaacccggggaaaagaaagatgtaagtggcaccatgcctgactcctacagc
cctcagtatgtggaggctgcctggtacccttggtgggagcgtcagggcttcttcaagcca
gagtatgggcgtcctagcgtgtcagcaccaaatccccgaggggtcttcatgatgtgcatc
ccaccccccaacgtgacaggctctctgcacctgggccacgcgctcaccaatgccatccag
gactgcctgactcgatggcaccgtatgcgtggggagaccaccctgtggaacccgggctgt
gaccatgcaggcattgccacccaggtggtggtggaaaagaaactgtggagagagcggggt
gtgaaccggcaccagctgggccgtgaggcctttctccaggaggtctggaagtggaaggag
gagaagggtgacaggatttaccaccagttgaagaaacttggcagctccttggactgggat
cgagcctgtttcaccatggaccctaaactgtcagtagcggtgacagaggctttcgttagg
ctccatgaagaaggtgtcatctaccgtagcacccgcctggtcaactggtcctgcaccctc
aattctgccatttctgacattgaggtggataagaaggagctgacgggtcgcaccctgctc
tctgtgcctggctacaaggagaaggtggagtttggggtcctcgtgtcctttgcctacaag
gtccaaggctcagacagtgacgaggaagtggtggtggcaacaactcggattgagacaatg
ctgggagatgtggctgtggctgtgcaccccaaagactccaggtaccagcatctaaaggga
aagagtgtcattcatccgttcttgtcccggagcctccctgttgtctttgatgactttgtg
gacatggagtttggcacaggtgccgtgaagatcacccctgcccacgaccagaacgactat
gaggtcgggcagcggcatgggctggaggccatcagcatcatggactcaaagggggcgctt
gtcaatgtgccagcgcctttcttgggcctgcccaggtttgaggctaggaaggcagtgctg
gctgcactgaaggagcggggactgttccgtggcatcaaggacaaccccatggtggtgccg
ctttgcaaccgctccaaggatgtggtagaacctctactaaggccacagtggtacgtgcgc
tgtggggagatggctcaggccgccagtgcggctgtgacccggggcgacctccgtatcctg
cctgaggcccatcagcggacttggcattcttggatggacaacattcgagactggtgcatc
tctcggcagctgtggtggggccaccgaatccctgcctactttatcaccgtccacgaccca
gctgtaccccctggtgaggaccctgacggacggtactgggtgagcggacgcacggaagca
gaggccagagagaaggcagcacgcgagtttggcgtgtccgttgacaagatcagccttcag
caagatgaggatgtattggacacctggttctcttctggtctctttcccttttccatcctt
ggttggcccaatcagtcagaagaccttaatgtgttctaccctgggaccctgctggagacg
ggccatgacatcctcttcttctgggtggcccggatggtcatgctcggcctgaaactcaca
ggcagactgcccttcagagaggtctatctccacgcaatcgtgcgtgatgctcacggtagg
aagatgagcaagtctcttggcaatgtcatcgaccccctggatgtcatccatggagtttct
ttgcagggcctccatgaccaactattgaacagcaacctggaccccactgaggtggagaaa
gccaaagaaggacagaaggccgacttcccagcagggattcccgagtgtggtacagatgcc
ctgcgctttggactctgtgcctacacatcccaaggtcgagatatcaacctggatgtaaat
aggatcctggggtaccgccacttctgcaacaaactctggaatgccacaaagtttgccctg
cgtggcctggggaagagtttcgtgcccttgcagacctccaagcctgaagggcatgagagt
ttggtggaccgctggatccgcagccgactcactgaggccgtgaggctcagcaatgaaggt
ttccaggcctacgattttccggccatcaccaccgcccagtacagcttttggctctatgag
ctctgtgacgtctacttggaatgcctaaaacccgtactgaatggagtggatgagacagca
gcggaatgtgcccggcagaccctctatacctgcctggacgttggcctgcggctgctctca
cccttcatgcccttcgtcacggaggagctgttccagaggctgccccggcggacaccagca
gctcccgctagcctgtgtatcaccccctacccagagccctcagagtgctcctggaaggac
cctgaggccgaagctgctcttgagctggcgctgagcatcacccgagctgtgcgctccctg
cgtgccgactacaacctgacccggaccaggcctgactgtttcttggaagtagctgacgag
gccacaggcgccttggcatcggcggtgtcaggctatgtgcaggtgctggccagtgcgggt
gtggttgctgtcctggccctgggggctcctgcaccacagggctgtgctgtggctgtggca
tcagaccgctgctccatccacctgcagctgcagggcctagtggacccagcccgggagcta
ggcaagctgcaggccaagcgaagtgaggcccagcgccaggctcagcggctgcaggagcgc
cgtgctgcctctggctactcagccaaggtgccccttgaggtccaggaggcagacgaggcg
aagttgcaacagacagaggcagaactcaggaaggtggatgaggccattgctctgttccag
aagatgctgtga
DBGET
integrated database retrieval system
