Microtus oregoni (creeping vole): 121435356
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Entry
121435356 CDS
T08307
Symbol
Ush1c
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
morg03037
]
121435356 (Ush1c)
Cilium and associated proteins [BR:
morg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121435356 (Ush1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
121435356
NCBI-ProteinID:
XP_041490597
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All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVTVLVGDLKLVINEPNRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG
GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPEEPL
KWQYVDQFVSESGGVRGGSGSPSNRTTKEKKVFISLVGSRGLGCSISSGPIQKPGIFISH
VKPGSLSAEVGLETGDQIVEVNGIDFSNMDHKEAVNVLKSSRSLTISVVAGAGRELFMTD
RERLEEARQRELQRQELLMQKRLAMESNKILQEQQEMERQRRKEIAQKAAEENERYRKEM
EEIVEEEEKFKKQWEEDWGSKEQLILPKTITAEVHPAPLRKPKSFGWFYRYDGKFPTIRK
KEKEKKKAKYDSLQDLRKNKKELEFEQKLYKEKEEMLEKEKQLKINRLAQEVSETEREDL
EESEKTQYWVERLCQTRLQQISSSENEIAEMTTGPPPPPPSVSPLAPPLRRFAGGLHLHT
TDLDDIPLDMFYYPPKTPSALPVMPHPPTVSPPSKVPAPPVLPSSGHMSASSSPWVQRTP
PPIPIPPPPSIPTQDLTPTRPLPSALEEALGNHPFRTGDPGHPADDWEANTHSGKPTSSP
TPERTFPHTPKTFCPSPQPPRGPGVSTISKPVMVHQEPNFIYRPAVKSEVLPQEMLKRMV
VYQTAFRQDFRKYEEGFDPYSMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKVV
VSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC
PPKEYDDELSSLPSSAAESPQLVPEQLEAHEAVCRHGFFLRLEPTDLLLKSGERSQPDSS
LEPGKLCTRSLNSA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaaggtggcccgggaattccgacacaaggtggatttcctcattgaaaatgat
gcagagaaggactatctctatgatgtgctgcggatgtaccaccagaccatggatgtgacc
gtgcttgtgggagacctgaagctggtcatcaatgaacccaaccgtctgcccctgtttgat
gccatccggcccctgatcccactgaagcaccaggtggagtatgaccagctgacaccccga
cgctccaggaagctgaaggaggtacgtctggaccgtctgcacccagaaggcctcggcctc
agcgtgcgtggaggcctggagtttggctgtggactcttcatctctcacctcatcaaaggt
gggcaggcagacagtgttgggctgcaggtaggggacgagatcgtccggatcaatggctac
tccatctcctcctgtacccacgaagaagtcatcaacctgatccgcaccaagaagaccgtg
tccatcaaagtgagacacattggcctgatccctgtgaagagctctcctgaggaacccctc
aaatggcagtatgtggatcagtttgtgtcggagtctgggggtgtgcgaggtggctcaggc
tctcccagcaaccggacaaccaaggagaagaaggtgttcatcagtctagtaggctcccgg
ggcctgggctgcagcatctccagtggccccatccagaagcctggcatcttcatcagccat
gtgaagcctggctccctgtctgcagaggtggggttggagacaggggaccagattgtggaa
gtcaatggcattgacttctccaacatggaccacaaggaggccgtgaatgtcctgaagagt
agccgcagcctgaccatctccgttgtagctggagctggccgggagctgttcatgacagac
cgggaacggctggaggaggcacggcaacgtgagctccaaaggcaggagctcctcatgcag
aagcggctggcaatggagtccaacaagatcctccaggagcagcaggagatggagcgccag
aggagaaaggaaatcgcccagaaggccgctgaggagaacgagagataccggaaggagatg
gaggagatcgtggaggaggaagagaagtttaagaagcagtgggaagaagactggggatca
aaggaacagctcatcctgcctaaaaccatcactgcagaggtgcacccggcgccccttcgc
aagcccaagtcctttgggtggttttaccgttacgatggcaaattcccaaccatccggaag
aaagaaaaagagaagaagaaagccaagtatgacagcctgcaggacttgcgaaagaataag
aaggagctggaatttgagcaaaagctctacaaagagaaggaagagatgctggagaaggag
aagcagctgaagatcaaccggctggcccaggaggtgtctgagactgagcgggaagacctt
gaggaatcggaaaagactcagtattgggtggagaggctctgtcagacccgcctccagcag
atttcctcttccgagaatgagattgctgagatgaccacagggcccccacctcccccacct
tctgtgtctcctctggccccacccttgagacgcttcgccggtgggctccacctccacacc
actgacctggatgacatccccctggacatgttctactatccccccaagactccctcggca
ttgcctgtgatgccccaccctccaaccgtcagcccaccctccaaggtccccgcccctccc
gtattgccttcatcaggccacatgagtgcctcgtcctcaccttgggtgcagcgcaccccg
cccccgattcccattcctccccctccatccattcccacgcaagacctcactcctacccgc
ccactgccctcagcccttgaagaggccctgggcaaccaccccttccgcactggggaccca
ggccatccagccgatgactgggaggcaaatacccacagtgggaaacccaccagctcccct
acccctgaacggaccttcccacataccccaaagacattttgcccaagcccacagcctcca
agaggccctggcgtgtccaccatctccaaacctgtcatggtccaccaggaacccaacttc
atctacaggccagctgtgaaatccgaggtcctgccgcaggagatgctgaagaggatggtg
gtgtatcagacagcattcagacaagatttcagaaaatatgaagaaggctttgacccctac
tccatgttctcaccagagcagattgcagggaaggacgtccgacttctgcgcatcaaaaag
gaggggtctttagacttggctctggaaggtggcgtggactcccccgtggggaaggtggtc
gtctctgctgtttatgaagggggagctgctgaacgacatggtggtgttgtgaaaggggac
gaaatcatggccatcaatggcaagattgtgacggactacaccctggctgaggctgaggct
gccctgcagaaggcctggaatcagggcggggactggatagaccttgtggttgccgtttgt
ccccccaaggagtacgatgatgagctctcttctcttccctcttctgcagccgaaagcccc
cagctggtcccagagcagcttgaagcccatgaggccgtgtgtagacacgggttcttcctg
cggctggagcccacggaccttcttttaaagtctggagagagaagccagccagactcctct
ctggagcctggcaagctctgcacccggtccctgaactcagcttga
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