Microtus oregoni (creeping vole): 121435704
Help
Entry
121435704 CDS
T08307
Symbol
Smarcb1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03082
ATP-dependent chromatin remodeling
morg03250
Viral life cycle - HIV-1
morg04714
Thermogenesis
morg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121435704 (Smarcb1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121435704 (Smarcb1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121435704 (Smarcb1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121435704 (Smarcb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
morg01009
]
121435704 (Smarcb1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121435704 (Smarcb1)
03036 Chromosome and associated proteins [BR:
morg03036
]
121435704 (Smarcb1)
Protein phosphatases and associated proteins [BR:
morg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121435704 (Smarcb1)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121435704 (Smarcb1)
SWI/SNF complex
121435704 (Smarcb1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121435704 (Smarcb1)
PBAF complex
121435704 (Smarcb1)
SWI/SNF complex
121435704 (Smarcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
121435704
NCBI-ProteinID:
XP_041491101
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgttgagcaagaccttcgggcagaagcccgtcaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactgtggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tacaccaccctcgccaccagcgtgacgctgctgaaagcctcagaggtggaagagattctg
gatggcaacgatgagaagtacaaggctgtgtccatcagcacggagccccccacctacctc
agggaacagaaggccaagaggaacagccagtgggtacccaccctgcccaacagctcccac
catctggacgctgtgccatgttccaccaccatcaataggaaccgcatgggtcgggacaag
aagagaaccttccccttgtgctttgatgaccatgatccagctgtgatccatgagaatgca
tctcagcctgaggtgctagtgcccatccggttggacatggagatcgatgggcagaagcta
cgtgatgcctttacctggaacatgaatgagaagctaatgacccctgagatgttttcagaa
atcctctgtgatgacctggatttgaacccgctgacttttgtgccagctatcgcctccgcc
attaggcagcagattgagtcctaccccacagacagcatcctggaggaccaatctgaccag
cgtgtcatcatcaagctgaacatccatgtgggaaacatctccctggtggatcagtttgaa
tgggacatgtcagagaaggagaactccccggagaagtttgccctgaagctgtgttcggag
ctgggtttgggcggggagtttgtcaccaccattgcatacagcatccgcggacagctgagc
tggcaccagaagacctacgcctttagtgagaacccacttcccacagtcgagattgccatc
agaaatactggagatgctgaccagtggtgccccctactggagacattgacagatgcagag
atggagaagaagatccgggatcaagaccggaacacaaggcgaatgaggcgtctcgccaac
actgccccagcctggtga
DBGET
integrated database retrieval system
