Microtus oregoni (creeping vole): 121436061
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Entry
121436061 CDS
T08307
Symbol
Helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121436061 (Helz)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
121436061 (Helz)
3'-5' decay
Other 3'-5' decay factors
121436061 (Helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
Bac_DnaA
AAA_7
Ada3
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
121436061
NCBI-ProteinID:
XP_041491601
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MEDRRAEKSCEEACESLKRQDYDMALQHCTEALLSLGQYSMADLAGPCPLEIERIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGEGAFRAVLCCMQLKGKLQLVSSILAKSLS
GESLNGMVTKDLTRLKTLLMETETATSSVLSGCHVEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMSSLSPEKVLSECIEGVEVEHSPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDASSKTIVDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKANYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQNQGTKEKVYEATIEEKTKDYIFLRISRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNDVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLIASAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENHSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNSSRQQQSSPKGKSLHHPQSD
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPSLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHPAAMAYNMNLLHTHGRGSPIPYGLGHHPPV
NIGQPQNQHVEKDQQEQSRNGKTDTSNPGPEINKIRTPEKKPTELKQVDLESNPQNRSPE
SRPSVVYSNTKFPRKDNLNPRHINLPLPAPHTQYAIPTRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPDQPNQVAPQPNQVAPQPNQVAPQPNQVVQQQSQAPPQAPQPPPQLSPAFQA
GPTNAFFNNAVAHRPQSPPAAEAVVPEQQPSPVLPDGHSPLRAITQPGPILASPLNNFVD
ENSPGLPIGEALDRVHGSVALETLRQQQARLQQWSEHHAYLSQGSIPYPHHPHSHLPHLP
QPPVRAEWKLASRVDDEVETTFSRFQDLLRELSHRDQGDTRELAEMPPPQSRLLQYRQVQ
TRSPPAVPSPPSSTDRSSHFSNCNDNSRDIEVANSLAFPQRLPPQLFSSPFSLTSEHLAP
PPLKYLAPEGAWNFANLQQNHLIGPGFPYGLPPLPPRPPQNPFIHIQNHQHAIGQEPFHP
LSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSAQPCAEEASAPQGSLAQGKELQDHS
RPPAFSFPAPESWANTTSSTPYQNIPCNGPSRTAQPRELIAPPKTVKPVEDQLKPDSAEV
SSSFNYTVLQHLGQFPPLMPNKQIAESANSSSQQSPAGSKPAMSYASALRAPPKPRPPPE
QAKKGSDPLSLFQELSLGSSPGSNGFYSYFK
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaagaagcgtgtgagtcactgaagaggcag
gactatgacatggccctccagcactgcacagaggccctgctttctcttggccagtactcc
atggcagacttggcagggccatgtcccttggagatagagcgcatcaaaatcgagagtctt
ctttacagaattgcctcattcttgcaactgaaaaactacgggcaagctgatgaagattgt
aggcatgtactgggggaaggactggccaaaggagagggtgccttccgggcagtgctgtgc
tgcatgcagctgaaagggaagctccagcttgtgtcctccatccttgccaagtcactgtca
ggagagtctctgaatgggatggtaacaaaagatttgacaagactgaagacgcttctcatg
gagacagagacagctacaagtagtgttctctctggatgtcatgtggaagacttagatgaa
gggtcttgtaacggttggcattttcggccgccacccaggggaatcacaagcagcgaggaa
tatactttgtgtaaaaggtttttagagcaaggaatttgtaggtatggtgcacagtgtact
tcagcacattcccaggaagaattagcagagtggcagaaaagatacgcctcacggttaata
aaattgaagcagcaaaatgagaataaacagctatcaggcagctacatggaaaccttgatt
gaaaagtggatgagctcactgtctcctgagaaagtgctcagcgagtgcatagagggagtt
gaggtggagcatagccctgacctgtcggtcaccgtcaacaccaaaaaatcccaccagaca
tggacctttgctctgacctgtaagcctgcaagaatgctgtatcgggtagcattgctttat
gatgctcatcgtcctcattttagtatcattgccatatctgccggagatagtactacccag
gtatcacaagaagtccccgaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggagccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgagtacctgatgcatgcaaagcagcaactggtg
accacagccaagcgctgggatgcttcctctaagactatcgtagatttcgaacctaatgaa
actactgatttggagaagagccttctgatcagataccaaattcctctttctgctgaccag
ctgtttacacagtccgttttagacaaatcattgaccaaggcaaactatcagtcacggttg
cacgacctgctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcagattttagcaagcttcatgctcactggagtttctgggggtgcaaag
tatgctcagaatggacaactttttggtcgttttaagcttactgaaaccctttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagctagtacagaaccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagattatatatttttaaggatatccagggaatgctgtgaagagcttaat
cttcggcctgactgtgacacacaggttgaacttcagtttcagttgaatcgactacccctc
tgtgaaatgcattatgcactagacagaattaaggacaatgatgttttgtttccagacatc
agtatgactcctaccataccttggagtcccaacagacagtgggatgagcaactagatcct
cgactaaatgcaaaacagaaggaagctgtcctggctatcaccactcctctctccatccag
ctgccgcctgttctcatcatcggaccctacgggacaggcaaaaccttcaccctggctcag
gcggtcaagcacatcttgcagcagcaggagaccagcaggattctcatttgcacccattct
aatagtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtgtatttccgaaaccgctgggtgaagactgtccacccg
gttgtgcatcagtactgtttgatcgcaagcgcacactccaccttccagatgccccagaag
gaagacatccttaaacatcgagtggtggtggtcacactgaatacttcccagtacctctgc
cagctggaccttgaacccgggttctttacgcacattctgttagatgaagctgcccaggcc
atggagtgtgagaccattatgcctctagccttagcaactaagaacacacggattgttttg
gctggtgatcatatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtttcattacttgatcgactctacgagcattatcctgccgagtttccatgtagg
atcctcctctgtgagaactaccgctcccatgaagctatcatcaactatacctctgagctt
ttctatgagggtaaactgatggccagtggaaagcagccagcacataaggacttctaccca
ctaacattttttacagcacgaggggaagatgtacaagaaaaaaatagcacagctttttat
aacaatgcagaggtatttgaagtcgtggaacgtgtagaggagctaagaaggaagtggcca
gtagcatgggggaagttagatgacggcagtattggtgtggtgactccatatgctgatcag
gtgtttaggatacgtgctgaacttcggaaaaagagactatctgatgtgaatgtagaaagg
gtgctaaatgttcaaggaaagcaattcagagttctgtttcttagcacagtgcgtacacgc
cacacttgcaagcataagcagacgccaattaaaaagaaagagcaacttctggaagactcc
actgaggacttagattatggttttttatctaactacaaacttctcaatactgccatcaca
agagcacagtccctggttgctgtggtgggagaccccattgctctgtgctctatcggaagg
tgtaggaagttttgggagcgatttattgccctgtgtcatgaaaatcatagtctacacggg
atcacatttgaacagatcaaggcccagctagaggctttagaactcaagaagacatatgta
ttgaatccactggctcctgaatttatccctcgggctttacgactgcagcactcaggaaac
agcagcagacagcagcagtcatcacccaagggaaaaagccttcatcatcctcagagcgac
catttccagaatgatggcattgttcaacccaatccttctgtacttattggcaatcctatt
agagcatatactcctccaccccctcttggacctcacccaagtttgggaaaatctccaagc
cccgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagtcatgtcggtgcctttgcctgtaccatggacaggataccagggtagg
tttgcagttgatcctcggattattacacacccagcagcgatggcctacaatatgaacctg
ttacatacgcatggacgtgggtcaccgatcccttatggccttggacatcacccacctgtc
aacatagggcagccgcagaatcagcatgtagagaaggatcaacaagagcaaagtcgaaac
ggtaaaactgatacaagtaaccctggacctgaaattaataagatccgaacaccagagaaa
aagcctacagagctcaaacaggttgatttggaatcaaatccacagaacagaagtcctgaa
tcccgtcccagcgttgtttattccaataccaaatttcctcgaaaagataatctcaaccca
agacacataaatcttcctcttcctgcaccacacacacagtatgcaatccctacccgccat
tttcatccacttcctcagctacccaggccaccatttcctattcctcagcagcataccttg
ttaaatcagcaacagaataatttgcctgaccaaccaaatcaggtggcaccccagccaaat
caggtggcaccccagccaaatcaggtggcaccccagccaaatcaggtggtccagcagcaa
agccaggcacctccacaggccccgcagccacctcctcaactctctcctgcatttcaggcg
gggcccaccaatgcatttttcaataatgcagttgctcaccgaccacagtctcctccagct
gcagaggctgtggttcccgagcagcagccatctcccgtgcttcctgacggtcacagtcca
ctgagagccattacacagcctggtcccatcctagcctcacctctgaacaactttgttgat
gagaactccccaggattgcctataggagaagctttggatcgagtacatggaagtgtagct
ctggagacactgaggcagcagcaggcgcggctacagcagtggagtgagcaccatgcctat
ctcagccagggcagcattccgtatccacaccatccccattctcacctcccgcatcttccc
cagccaccagtgagggcagagtggaaactggccagcagagttgacgatgaagtggagaca
acgttctcgaggtttcaggacttactcagagagctgtctcatcgtgatcaaggtgacact
cgagagctagctgaaatgccaccgcctcaatcaaggcttctgcaatacagacaagttcag
actagaagcccaccagcagtcccgtctcccccttccagcacagaccgcagtagccacttt
tctaactgtaacgacaacagcagagacattgaagtagccaacagcctagcattcccacaa
cgcctcccacctcagctcttcagctcccccttttcgctgacatctgaacaccttgctcca
cctcccctgaaatacctggctcctgaaggagcatggaattttgctaacttgcaacagaat
cacttaatagggccgggctttccctatggcctacctccattgcctcccaggccaccacag
aacccttttatacacatacagaaccatcaacacgctattggtcaagagccatttcaccca
ctgtcatctcgcacagtatcttcttcttcgctccccagcctagaagagtatgagcccaga
ggacctggtcggcccttgtaccaaagaagaatttcatctagctcagcccagccttgtgcg
gaagaggcaagtgctccccaaggcagtctggctcagggcaaagaactgcaggaccacagc
cgcccgcctgctttcagcttcccagcccctgagtcctgggctaacaccacctcgtctacc
ccctaccagaacattccgtgcaatggacccagcaggactgctcagcccagagagttgata
gcgccacccaagactgtcaaacccgttgaggatcagctgaagcctgacagtgcagaggtg
tccagttccttcaactacacggtgctgcagcacctcggccagttcccacccctcatgccc
aacaaacagatcgcagagtcggccaacagcagcagccagcagagcccggcagggagcaag
cccgccatgtcctatgccagtgctctgcgggccccgcccaagcccaggccaccacccgag
caggccaagaagggcagcgacccgctgtccctcttccaggagctcagcctgggcagcagc
ccgggcagcaacggcttctactcctacttcaagtga
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integrated database retrieval system
