Microtus oregoni (creeping vole): 121436398 Help Entry 121436398         CDS       T08307                                  Name (RefSeq) huntingtin-like isoform X1   KO K04533   huntingtin Organism morg  Microtus oregoni (creeping vole) Pathway morg05016   Huntington disease morg05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:morg00001]  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     121436398    05022 Pathways of neurodegeneration - multiple diseases     121436398  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:morg03019]     121436398    04131 Membrane trafficking [BR:morg04131]     121436398    03029 Mitochondrial biogenesis [BR:morg03029]     121436398 Messenger RNA biogenesis [BR:morg03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      121436398 Membrane trafficking [BR:morg04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     121436398 Mitochondrial biogenesis [BR:morg03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     121436398 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_EF3_N Motif Other DBs NCBI-GeneID:  121436398 NCBI-ProteinID:  XP_041492171 LinkDB All DBs Position Unknown AA seq 3120 aa AA seqDB search MATLEKLMKAFESLKSFQQQQQQQQQPPPPPPPPQPPQPPPQGQPPPHAPPPPPLPGPAE EPLHRPKKELSATKKDRVSHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESD VRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKC RPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKSS SPTVRRTAAGSAVSICQHSRRTQYFYNWLLNVLLGLLVPMEEEHSTLLILGVLLTLRCLV PLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQHQDHNVVTGALELLQQ LFRTPPPELLQALTTPGGLGQLTVVQEEARGRGRSGSIVELLAGGGSSCSPVLSRKQKGK VLLGEEEALEDDSESRSDVSSSAFAGTSVKSEIGGELATSSGVSTPGSVSHDIITEQPRS QHTLQADSVDLSSCDLTSAATDGDEEDILSHSSSQFSAVPSDPAMDLNDGTQASSPISDS SQTTTEGPDSAVTPSDSSEIVLDGADSQYLGMQIGQPQEEDEEEAAGVLSSEVSDVFRNS SLALQQAHLLERMGHNRQPSDSSIEKLISRDEVAEANDPESKACRIKGDIGQPNDDDSAP LVHCVRLLSASFLLTGEKKALVPDRDVRVSVKALALSCIGAAVALHPESFFSKLYKVPLD TMESAEEQYVSDILNYIDHGDPQVRGATAILCGTLIYSILSRSRLRVGDWLGNIKTLTGN TFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCVLSLCSSSYSDLGLQLLIDMLPLKNSS YWLVRTELLETLAEIDFRLVSFLEAKAESLHRGAHHYTGFLKLQERVLNNVVIYLLGDED PRVRHVAAASLTRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVSTI TRIYRGYSLLPSITDVTMENNLSRVVAAVSHGLITSTTRALTFGCCEALCLLSAAFPVCT WSLGWHCGVPPLSASDESRKSCTVGMASMILTLLSSAWFPLDLSAHQDALILAGNLLAAS APRSLRSSWASEEEANSASTRQEEVWPALGDRTLVPMVEQLFSHLLKVINICAHVLDDVT PGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASAPMSPKKGGEASAASRQSDTSGPVT ASKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQILEL ATLQDIGKCVEEVLGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGLASNPSKSQC RAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQKVSAQ LKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRV NYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKI IQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQ YHQVLEMFILVLQQCHKENEDKWKRLSRQVADIILPMLAKQQMHIDSHEALGVLNTLFEI LAPSSLRPVDMLLRSMFIIPSTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELS FSPYLISCSVISRLREGDGNSTLGECSEGRQTKNLPEETFSRFLLQLVGILLEDIVTKQL KVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTSDGCEGSFYTLENLNA RVRSMVPTHPALVLLWCQILLLINHTDHRWWAEVQQTPKRHSLSCTKSLNPQMSGEEEDS GSAAQLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLINLSHEPPVQDFI SAIHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLLGTP FRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEHLQNSGLAQRHQRLYSLLD RFRLSTVQDSLSPLPPVTSHPLDGDGHTSLETVIPDKDWYLQLVRSQCWTKSDSALLEGA ELVNRIPAEDMNDFMMSSEFNLSLLAPCLSLGMSEIATGQKSHLFEAARGVTLDRVTSVV QQLPAVHQVFQPFLPIEPTAYWSKLNDLLGDAASYQSLTTLARALAQYLVVVSKVPAHLH LPPDKEGDIVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQVPGLWGLLSSPEY VTHACSLIHCVRFILEAIAVQPGDQLLGSESRSDTPRAIRKEGEDSNIQNPSYITSACEM VAEMVESLQSVLALGHKRNSTLPSFLTAVLKNIVISLARLPLVNSYTRVPPLVWKLGWSP KPGGDFGTVFPEIPVEFLQEKEILKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVM EQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKVLDTR FGRKLSMIRGIVEQEIQEMVSQRENTATHHSHQAWDPVPSLLPATTGALISHDKLLLQIN SERELGNMSYKLGQVSIHSVWLGNNITPLREEEWDEEEEEEADVPAPTSPPVSPVNSRKH RAGVDIHSCSQFLLELYSRWILPSSTARKTPVILISEVVRSLLVVSDLFTERTQFEMMYL TLTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKTVAEPVSRLLESTLRSSHLPSQIGA LHGILYVLECDLLDDTAKQLIPVVSEYLLSNLKGIAHCVNIHSQQHVLVMCATAFYLMEN YPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQLSRLDTESLVKL SVDRVNVQSPHRAMAALGLMLTCMYTGKEKASPGRTSDPSPATPDSESVIVAMERVSVLF DRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQT LHSAGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFLVSASTSPWVSAILPHIISRMGK LEQVDVNLFCLVATDFYRHQIEEEFDHRAFQSVFEVVAAPGSPYHRLLACLRNVHKVTTC NT seq 9363 nt NT seq  +upstreamnt  +downstreamnt atggcaacccttgaaaagctgatgaaggctttcgagtcgctcaagtcgttccaacagcag caacagcagcagcagcagccgccgccaccaccgccgccgcctcagccccctcagccgcct cctcaggggcagccgccaccgcatgcaccgccgccaccgccgctgccgggtccggccgag gagccgctgcaccgaccaaagaaggaactctcagccaccaagaaggaccgtgtgagtcat tgtctaacaatatgtgaaaatattgtggcacagtctctcagaaattctccagaatttcag aaactcttgggcattgctatggagctgtttctgctgtgcagcgacgatgcggagtcagac gtcaggatggtagctgatgagtgcctcaacaaagtcatcaaagcgttgatggattctaat cttccaaggctacagctagaactctataaggaaattaaaaagaatggtgctcctcgaagt ttgcgtgcagccctgtggaggtttgctgagctggctcacctggttcgacctcaaaaatgc aggccttacctagtgaaccttcttccatgcctgacccgaacaagcaagagacctgaggaa tcagttcaggagaccttggctgcagctgttcccaaaattatggcttcttttggaaatttt gcaaatgacaatgaaattaaggttctgttgaaagctttcatagcaaatctgaagtcaagt tctcccactgtccgacggacagcagctggctcagcagtgagcatctgccagcactccagg aggacacagtacttctataattggctcctaaatgtgctcctaggtctgctggttcccatg gaggaagaacattccactctcctgatcctcggtgtcctgctcacattgaggtgtctagtg cccttgctccagcagcaggtcaaggacacaagtctaaaaggcagttttggagtgacacgg aaagaaatggaagtttctccttctgcagagcagcttgtccaggtttatgaactgactttg catcacacgcagcaccaagaccacaatgtggtgacaggggctctggagctcttgcagcag ctcttccgtactcctcctcctgagctgctgcaagcactgacaacaccaggtggtcttggg cagctcactgtggttcaagaggaggccaggggccgaggccgcagcgggagcattgtggaa cttttagctggagggggttcctcgtgcagccctgttctctcaagaaaacaaaaaggcaaa gtgctcttaggagaagaagaagccttggaagatgactcggagtccaggtcagatgtcagc agctcagcctttgcaggtacctctgtgaagagtgagattggtggagagcttgctacttct tcgggtgtctccactcctggttctgtaagtcatgacatcatcactgagcagccacggtcc cagcacacacttcaagcagactctgtggatttgtcgagctgtgacttgaccagtgctgct actgatggagatgaggaggacatcttgagccatagctccagccagttcagtgctgtccca tccgaccctgctatggacctgaatgatgggacccaggcctcctcacccatcagtgacagc tctcagaccaccactgaagggcctgattcagctgtgactccttcagacagttctgaaatt gtattagatggtgctgacagccagtatttaggcatgcagataggacagccacaggaagaa gatgaggaggaggctgcgggtgttctttccagtgaagtatcagatgttttcagaaactct tctctggcccttcaacaagcacacttattggagagaatgggtcataacagacaaccttct gacagcagtatagagaagcttatatccagagatgaagttgctgaagcgaatgacccagaa agcaaggcttgccgaatcaaaggtgacataggacagcctaatgatgatgattctgctcct ctggtccattgtgtccgcctgttatctgcttcctttttgttaactggggaaaagaaagca ctggttccagacagagatgtgagggtcagtgtgaaggccctggccctcagctgtattggt gcagccgtggcccttcatccagaatcattcttcagcaaactgtataaagtacctcttgac accatggaaagtgctgaggaacagtatgtctctgacatcttgaactacatcgatcatgga gacccacaggtccgaggagctactgccattctctgtggaaccctcatctactcaatactc agcaggtctcgactccgtgttggcgactggctgggcaacattaaaacactgacaggaaat acgttctctctggtggactgcattcctttgctgcagaaaactttgaaggatgagtcttct gttacttgcaagttggcttgtacagctgttaggcactgtgtcctgagtctttgcagtagc agctacagtgacttgggattacaactgctcattgatatgttgcctctgaagaacagctcc tactggttggtgaggactgaactgctggaaacccttgcagagattgacttcaggctggtg agttttttggaggcaaaagcagaaagtttacaccgaggggctcatcattatacagggttt ttaaaactacaagaacgagtgcttaataatgtggtcatttatttgcttggagatgaagac cccagggtgcgacacgttgctgcagcatcgctaacaaggcttgtcccaaagctgttctat aaatgtgaccaaggacaggctgatccagtagtggctgtagcaagagatcaaagcagtgtt tacctgaaactcctcatgcacgagacacagccaccatcacacttctctgtcagcaccata accagaatctataggggttatagtttactgccaagcataacagacgtcactatggaaaac aacctctcaagggttgttgctgcagtttctcatggactcattacatccaccacacgggcg ctcacatttggatgttgtgaagccttgtgtcttctttcagcagcctttccagtttgcact tggagcttaggttggcattgtggagtgcccccactgagtgcctctgatgagtccaggaag agctgcactgttgggatggcttcaatgattctcaccctgctttcatcagcttggttcccc ttggatctctcagcccatcaggatgccttgattttggctggaaacttgcttgcggccagt gcccccaggtctctgagaagttcatgggcctctgaagaagaagccaattcagcatctacc agacaggaggaagtttggcctgctctgggtgaccggacactggtgcccatggtagaacag cttttctcccacctgctgaaagtgatcaatatctgcgctcacgtcttggatgatgtgact cctggaccagcaatcaaggcagctttgccttctctaacaaaccccccttctctaagtcct attcgacggaaagggaaagagaaagaaccaggagaacaagcttctgctccaatgagtccc aagaaaggtggtgaggccagtgcagcctctcgacaatcagacacctcaggacctgtcaca gcaagtaaatcttcttcattggggagtttctaccatctcccttcctacctcaagctccat gacgtcctgaaagccactcatgccaactataaggtcaccttagatcttcagaacagcact gaaaagtttggggggttcctgcgctctgccttggacgtcctctctcagattctagaactg gcaacactgcaggacattggaaagtgtgttgaagaggtccttggatacctgaaatcctgc tttagtcgagaaccgatgatggcaactgtctgtgttcagcagctattgaagactctcttt gggacaaacttggcctcacagtttgatggcttggcttccaaccccagcaagtctcaatgc cgagcacagcgtcttggctcttccagtgtgaggccaggcttatatcactactgcttcatg gcaccatacacgcacttcacgcaggccttggctgatgccagcctgaggaacatggtgcag gcggagcaggagcatgatgcctcggggtggtttgatgtactccagaaagtatctgcccaa ctgaagacgaacctcacaagcgtcacaaagaaccgtgcagataagaatgctattcacaat cacattagattatttgagcctcttgttataaaagctctgaagcagtacaccaccacgaca tctgtacagttgcagaagcaggttttggatttgcttgcacaactggttcagctgcgggtc aattactgtctgctggattcggatcaggtgttcatcggttttgtgctgaagcagtttgag tacattgaagtgggccagttcagggaatcagaggcaattattccaaatatatttttcttc ctggttttactgtcttatgagcgctaccattcaaaacagatcattggaattcctaaaatc atccagctatgtgatggcatcatggccagtggaaggaaggctgttacacatgccatacct gctctgcagcccattgtccatgacctgtttgtgttaagaggaacaaacaaagctgatgca gggaaagagcttgaaacccagaaggaggtggtggtgtcgatgcttttaagactcatccag taccatcaggtgctggagatgtttatcctcgttctgcagcagtgccacaaagagaatgag gacaagtggaaacggctatctcggcaggttgcggacatcatcctgcccatgttagccaag cagcagatgcacattgattctcatgaagcccttggagtattaaataccttgtttgagatt ctggctccttcctcactacgtcccgtggatatgcttttgcggagtatgttcatcattcca agcacaatggcctctgtaagcaccgtgcagctgtggatatctggaatcctagccattctg agggttctcatttcccagtcaaccgaagatattgttctttctcgtattcaggaactctcc ttctctccatatttaatctcctgttcagtaattagcaggttaagagagggagacggtaat tcaacattaggagaatgcagtgaagggagacaaacaaagaatttgccagaagaaacattc tcaaggtttcttttacagttagttggaattcttttagaagacattgttacaaaacagctc aaagtggaaatgagtgaacagcagcatacattctactgtcaagagctaggcacactgctc atgtgtctcatccacatcttcaaatctggaatgtttcggagaatcacagcagctgccact agactcttcaccagtgatggctgtgaaggcagcttctatactctagagaacctcaatgca cgggttcgatccatggtgcccacgcacccagccctggtactgctctggtgtcagatcctg ctgctcatcaatcacactgaccaccgatggtgggcagaggtgcagcaaacacccaaaagg cacagtttgtcctgcacgaagtcacttaacccccagatgtctggtgaagaggaggattct ggctcagcagctcagcttggaatgtgcaatagagaaatagtgcgaagaggggcccttatt ctcttctgtgattatgtctgtcagaatctccatgactcagaacacttaacgtggctcatt gtaaatcacattcaagatctgatcaacttgtcccatgagccaccagtacaagactttatt agtgccattcatcgtaattctgcggctagtggccttttcatccaggcaattcagtctcgt tgtgaaaatctttcaactccaaccaccctgaagaaaacacttcagtgcttggaaggcatc catctcagccagtccggtgctgtgctcacgttgtatgtggacaggctcctgggtactccc ttccgtgcgctggctcgcatggtcgacactctggcctgtcgccgcgtagaaatgcttttg gcagcaaatttacagagcagcatggcccagttgccagtggaagaactgaacagaatccag gagcacctccagaatagtgggcttgcacaaagacaccaaaggctctactccctgctggac aggttccgactctctaccgtgcaagattcacttagccccttgcccccagttacttcccac ccactggatggggatgggcacacttctttggaaacagtgattccagacaaagactggtac cttcagcttgtaagatcccagtgttggaccaaatcagattctgcactgctggaaggtgca gagttggtgaatcgcatccctgctgaagacatgaatgacttcatgatgagctcggagttc aacctaagccttttggctccttgcttaagccttggcatgagtgagattgctactggccag aagagtcacctttttgaagcagcccggggggtgactctggaccgggtgaccagtgttgtt cagcagcttcctgctgtccatcaagtctttcagccttttctgcctatagagcccacagcc tactggagcaagttgaatgatctacttggtgatgctgcatcataccagtctctgaccaca cttgcccgtgccctggcacaatacctggtggtggtctccaaagtgcctgctcatttgcac cttccccctgacaaggagggagacatagtgaagtttgtggtaatgacacttgaggccctg tcatggcatttgatccatgagcaaatcccactgagtctggacctccaagccgggctagac tgctgctgcctggcactacaggtgcctggcctctgggggctgctgtcctccccagagtat gtgacccatgcctgctccctcatccactgcgtgcgattcatcctggaagccattgcagtg cagcctggggaccagcttctcggttcagaaagcaggtcagatactccaagggctatcaga aaggaaggagaagactcaaacatacaaaatcccagttatatcacttcggcctgcgagatg gtggcagagatggtggaatccctgcagtcagtgctggccttgggccacaaaaggaacagt actctgccttcattcctcacggcagtgcttaagaatattgtcatcagtctggcgcgtctc cccctggtcaacagctatacgcgtgtgccccctctggtatggaaacttgggtggtcaccc aaacctggaggggattttggcacagtgttccctgagatccctgtagaattcctccaggag aaggagatcctcaaggagttcatctatcgcatcaacaccctagggtggaccagtcgtacc cagttcgaagaaacttgggccaccctccttggtgtcttggtgacccagcccctagtgatg gaacaggaggagagcccaccagaggaagatacagaaaggacccagatccatgtcctggct gtgcaggccatcacctctctagtgctcagtgcaatgactgtgcctgtggctggcaatcca gctgtaagctgcttggagcaacagccccggaacaagcctctgaaggttctcgataccaga tttggaagaaaattgagcatgatcagagggattgtagaacaagagatccaagaaatggtt tcccagagagagaatactgccactcaccattctcaccaagcctgggatcctgtcccttcc ctgttgccagctactacaggtgccctcatcagccatgacaaactactactgcagatcaac tcagagcgggagctaggcaacatgagctacaagctgggccaggtatccatacactctgtg tggctagggaacaatatcacacccctgagagaggaggaatgggatgaagaggaagaggaa gaggctgatgttcctgcaccaacatcaccacctgtgtctccagtcaattccagaaaacac cgtgctggggttgatattcactcctgttcgcagtttctgcttgaattgtacagccgctgg atcctgccatccagtacagccagaaagacccctgtcatcctgatcagtgaagtggttcga tctcttctcgtggtgtcagacttattcactgaacgcacccagtttgaaatgatgtatcta acgctcacagaacttcggagagtgcacccttcagaagatgaaatcctcattcagtactta gtacctgccacttgtaaggcagctgctgtccttggtatggacaaaactgtggcagaacca gtcagccgcctactggagagcacactcaggagcagccacctccccagccagatcggagcc ctgcatggcatcctttatgtgttggagtgtgacctcttggatgacactgcaaagcagctc attccagttgttagtgaatatctgctgtccaacctcaaaggaatagcccactgcgtgaac attcacagccagcagcatgtgctggtgatgtgtgccactgcgttctatctgatggaaaac taccctctggatgtgggaccagaattttcagcatctgtaatacagatgtgtggagttatg ctgtctggaagtgaagagtccaccccctccatcatttaccactgtgccctccggggtctg gagcgtctcctgctgtctgagcagctctctcgcttagatacagagtctttggtcaagcta agcgtggacagagtcaatgtacaaagcccacatcgggccatggcagccctaggcctgatg ctcacctgcatgtacacaggaaaagaaaaagccagtccgggcagaacctctgaccccagc cctgctacgcctgatagtgagtctgtgatcgttgctatggagcgggtatctgttctcttt gataggatccgcaaggggtttccctgtgaagccagggtcgtggcaaggatcctgcctcag ttcctagacgacttcttcccacctcaagatgtcatgaacaaagtcattggagagtttctg tccaaccagcagccatacccacaattcatggccactgtcgtctacaaggtttttcagact ctgcacagtgctgggcagtcatccatggtcagggactgggtcatgctatccctgtccaac ttcacacaaagaactccagttgccatggccatgtggagcctctcctgcttccttgtcagc gcatctactagcccatgggtttcagcgatcctcccacacatcatcagcaggatgggcaaa ctggagcaggtggatgtgaaccttttctgcctggttgccacagacttctacagacaccag atagaggaggaattcgaccacagggctttccagtctgtgtttgaggtggtggcggcacca ggaagtccataccaccggctgcttgcttgtttgcgaaatgtccacaaggtcaccacctgc tga

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