Microtus oregoni (creeping vole): 121437118
Help
Entry
121437118 CDS
T08307
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04151
PI3K-Akt signaling pathway
morg04382
Cornified envelope formation
morg04510
Focal adhesion
morg04512
ECM-receptor interaction
morg04820
Cytoskeleton in muscle cells
morg04926
Relaxin signaling pathway
morg04933
AGE-RAGE signaling pathway in diabetic complications
morg04974
Protein digestion and absorption
morg05146
Amoebiasis
morg05165
Human papillomavirus infection
morg05200
Pathways in cancer
morg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121437118
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121437118
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121437118
09142 Cell motility
04820 Cytoskeleton in muscle cells
121437118
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121437118
09154 Digestive system
04974 Protein digestion and absorption
121437118
09158 Development and regeneration
04382 Cornified envelope formation
121437118
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121437118
09162 Cancer: specific types
05222 Small cell lung cancer
121437118
09172 Infectious disease: viral
05165 Human papillomavirus infection
121437118
09174 Infectious disease: parasitic
05146 Amoebiasis
121437118
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121437118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
morg04147
]
121437118
00536 Glycosaminoglycan binding proteins [BR:
morg00536
]
121437118
Exosome [BR:
morg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121437118
Glycosaminoglycan binding proteins [BR:
morg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121437118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121437118
NCBI-ProteinID:
XP_041492889
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MFKDEQQVKYKEKKCNPSTTILTAIEQPERALFKVEKWYKEVITTFGNRAGRPGPIGTQG
PAGPQGFAGPTGLSGLKGERGSPGPLGPYGSKGDKGPMGIPGFVGINGIPGHPGQPGPRG
PPGLDGCNGTQGTVGFPGPDGYPGILGLPGLPGLKGSKGEPAPFQDSIIGMKGDPGLPGL
DGFAGPSGYPGSPGDAGPIGPPGLQGPPGPAGLPGPDGNMGLGFQGEKGVKGDVGLPGPA
GPPPSTGELEFMGFPKGKKGSKGEPGPQGFPGMSGPPGFLESGSVGEKGEKGILGLPGPR
GPMGSEGEQGHPGRQGKKGTSGFPGINGFPGIKGEKGGVGLRGPDIFTDPDGTVISGYPG
DPGVPGLPGPRGDEGIQGQYGPSGTPGLPSLTGLPGALGPRGFPGLKGDQGNPGRTTFGD
AGLPGRVGLPGLPGLPGPSGPPGRTFETAPLPNIESGFPGLRGEQGPKGHQGLKGIKGDS
GFCACEGGTPNIGPNGEPGLPGAQGLIGLPGIKGARGDPGSRGASGPAGAPGLFGSRGHT
GLKGKKGEPTISRGPKRPGDKGDAGPQGTPGMAGAPGKDGIPGLPGLPGIQGDSGSGFQG
EKGSPGLPGKKGLDGPTGPPGIGLPGLPGPRGLPGDKGIDGLPGQPGLRGAQGVTLPCII
PGSYGPSGFPGAPGFPGSKGARGLPGIPGKPGTHGSKGGPGSPGLIHLPGLPGFPGPHGE
KGLPGFPGLPGKDGLPGKAGSPGLPGSKGATGDIFGAENGASGEQGLQGLPGDKGFPGDS
GLSGPMGLTGKSGMQGPKGERGNPGTSGPPGEPGLSGSSDAFGVKGTSGLQGAPGLPGIS
GKPGKKGQRGDIGQPGSTGKRGLPGIKGLPGSQGSAGFLGSPGLPGVTGLPGIPGQKGEK
GPSGPAGFPGLPGLPGIPGADGLKGSSGSFGKVGQPGQAGTPGEKGDRGDPGSVGATSPR
PPMLNLWFKGEKGSRGSAGSIGFPGPRGEKGESGIPGLPGPPGAPGQSSIIKGLSGRQGA
PGSVGRSGLPGLKGSLGITGFPGLPGKSGSQGRTGTSGPLGATGIPGLKGDQGQTLGISG
SPGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDDGKVGIAGDPGLPGSPGLQGISGMKG
DPGLPGSPGHLGSIGHPGPSGLIGPKGFSGPPGLHGLNGLPGTKGTHGTPGASITGVPGP
AGLPGPKGEKGIPGIIIGDPGKQGSRGKKGDRGFPGLQGPAGPPGAPGISLPSVIAGQPG
DPGRPGLDGERGRPGLPGPPGPPGPSSDQGDTGEAGFPGIPGLQGLKGKQGLPGFSGLSG
DLGLKGMKGEPGLMGTPGKVGPPGDPGFPGMKGKAGPRGFPGPQGVPGHTPISEAIQAPP
GLLGLPGIDGIPGLTGDPGPQGSVGPQGSKGLPGIPGKDGPSGLPGSPGILGDPGLPGLQ
GPPGFEGAPGQQGPFGRPGMPGHSVQVGYTLVKHSQSEQVPLCPIGMSRLWVGYSLLFVE
GQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARCNDKSYWLSTTAPIPMMPVGQS
QIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLV
SPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTAVEERRQFWEEPVSETLKTGQLHT
RVSRCQVCMKHL
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagatgaacagcaggtaaaatacaaggagaagaaatgcaatccctccactact
atcctaacagccatagagcagcctgagagagcattgttcaaggtggagaagtggtacaaa
gaagtcatcactacgtttggaaacagagctggacgccctggaccaattggaactcaaggt
ccagcaggtcctcaaggatttgctggtcctactggtttatcagggttgaaaggagaaaga
ggctcgccgggccctctgggaccatatggatcaaaaggagacaagggtcccatgggaatt
cctggctttgttggcatcaatgggattccgggtcaccctggacaaccaggtcccagaggt
ccacctggactagatggctgtaatggaactcaaggaactgttggatttccaggccctgat
ggctaccctgggattttaggactaccggggctgcctggtctcaaaggttcaaaaggagaa
cccgctccttttcaagacagcatcataggaatgaagggggatcctgggctgcctggactg
gatggatttgctggtccatcaggataccctggatctcctggagatgcaggacccatagga
ccaccaggcttacaaggtcccccaggccctgctggacttcctggtccagacggaaatatg
gggttaggtttccaaggagaaaaaggagtcaagggggatgtcggcctccctggccctgca
ggaccacctccatctactggggaactagaattcatgggtttccccaaagggaagaaaggc
tccaagggtgaaccagggcctcaggggttcccaggcatgagtggccctccagggttcctg
gagtctggatctgttggagagaaaggagaaaagggaatccttggtttgccaggacctagg
ggtcccatgggttccgaaggagaacaaggacatccggggagacagggaaagaaggggact
tctggttttccagggattaacgggttcccaggaattaagggtgaaaagggtggcgttggt
ctgcgaggcccagacattttcaccgatccagatggcactgtgatctcaggttatcctgga
gaccctggtgtgccaggcctcccaggccctagaggagatgaaggcatccaaggccaatat
ggcccttctggcacccctggcctcccatcgttaacaggtcttccaggtgccctagggcct
cggggatttccaggcctgaaaggagaccaaggaaacccagggcgcaccacctttggagat
gctggtctgcctggtagagttggtttgccaggtttaccaggcttaccaggcccatcaggc
ccacctggtcgcacatttgagactgcacccttgcctaacatagagtctgggttcccgggt
ctccgaggagaacaaggtccaaaaggacatcagggcctcaaaggaataaaaggagactct
gggttttgtgcttgtgaaggtgggacgcccaacattggaccaaatggggaaccaggcctg
cctggggcacaaggtctcatcggcctcccgggtattaaaggggctagaggagatccaggc
tctcggggtgcatctggcccagctggggctccagggttatttggatctagaggacacaca
ggcctcaaaggaaagaaaggagaaccaaccatcagtagaggaccaaaacggccaggagac
aaaggtgacgctggtcctcaggggactccaggtatggcaggagctccaggcaaggatgga
ataccaggtttaccgggcctcccaggcattcagggagacagtggatctggcttccaaggt
gaaaaggggtcaccaggacttcctggtaaaaagggccttgatggtccaactggaccacca
ggaattgggctgccggggcttccggggccccgtggacttcctggagataaaggaatagat
gggttaccagggcaaccgggcctccgtggagctcaaggggtaaccttgccttgtattatt
cctgggtcatacggtccatcgggatttcctggagctcctggattcccaggctctaaagga
gctcggggcctccctggaattccaggcaagcctggcactcatggaagtaaaggagggccc
ggaagtccggggttaattcatcttccaggattgccaggatttcctggacctcatggggag
aagggattgcctgggtttcctgggcttcctggaaaagatggcctgcctgggaaggctggc
agtccaggtttaccaggttccaagggagccactggtgatatctttggtgctgaaaatggt
gcttccggggagcaaggactacagggattgccaggggacaaaggatttcctggagactct
ggcctttcagggcccatgggtttgactgggaagtctggtatgcaaggccccaaaggtgag
aggggcaaccctggaacatcaggaccaccgggagagccaggactctcagggtctagtgat
gcatttggtgtcaagggcacatctggactccaaggagcaccaggccttcctggcatctca
gggaagcctggaaagaagggccaaagaggagacataggtcaacctgggtcaaccggaaaa
cgaggtctacccgggatcaaaggccttcctggttctcaagggtcagctggtttcctggga
agcccgggtttgccaggagtcactgggttgccaggcatcccaggccaaaagggtgaaaag
gggccctctgggccagcaggatttcctggcttacctggccttcccggtatccctggggct
gatggattaaagggatcttccggttcatttggaaaggtgggacaacctggacaggctggt
actccaggtgaaaaaggagacagaggggatccagggtcagttggcgcaaccagtccaaga
cctccaatgctgaacctttggttcaaaggagaaaaaggctctcgaggttctgctggatca
attggatttcctgggcccagaggtgaaaaaggagagtctggcatcccagggttaccaggt
ccacctggagctcctggccagtctagtatcatcaaaggactcagtgggaggcaaggtgcc
cccggatctgtgggaagaagcggcttacctggcctgaaggggtccctggggatcacaggt
ttcccaggattgccaggaaaaagtggttcacagggtcgcactggaacttctggcccactg
ggagcaactggtatcccaggtttaaaaggagatcaaggccaaacacttggcatttctgga
agccccggacccaagggacagcctggtgaattaggttttaaaggtgttaaaggaaaagat
gggctagttggtgacagaggttacccaggaaacaaaggcgatgatggaaaagttggtatt
gctggagatcctggccttcctgggtctccaggacttcaagggatttcgggtatgaaagga
gacccaggcctcccaggttcccctggccatctggggtcaattggccaccctggaccctct
ggcttaataggacctaaaggattctctggacctcctggtttacatggactgaatggactt
ccaggtaccaagggtacccatggcactccaggagccagcatcaccggtgttcctggacct
gctggcctgcctggtcccaaaggggaaaagggaataccaggaatcatcatcggagatcca
ggaaaacaaggttcaaggggaaaaaaaggtgaccgaggtttcccaggtctccaaggtcct
gctggtccccctggagccccaggcatctccttgccctcagtcatagcaggacagcctggt
gaccccgggcggccaggcctagatggagaacgaggccgcccaggccttccaggacctcca
ggtccccctggcccatcctcagaccaaggtgacactggagaggctggcttccctggaatt
ccaggccttcaagggctcaagggaaaacaaggacttccaggtttctctggcctctctgga
gacctagggctgaaaggcatgaaaggagagcctggcctcatggggactcctggcaaggtt
gggccaccaggagacccaggatttcctgggatgaaggggaaggcagggccaagaggcttt
ccaggcccccagggtgtgccaggacacacaccaatttccgaagctattcaggctcctcca
ggacttttgggtcttccaggcattgatggtatccctggcctcacaggagaccctgggcct
caaggctctgtgggtccacaaggttctaaaggtctacctggcattcctggcaaggatgga
cccagtgggcttccaggctcacctggaatcctaggtgatcctggtctccctggactacaa
ggacctccgggatttgaaggtgctccagggcagcagggtccctttgggagacctggaatg
ccagggcacagtgtgcaagtgggctacacactggtcaaacacagtcagtcagaacaggtg
ccgctatgccccatagggatgagccggctgtgggtgggttacagcttactgttcgtggag
gggcaggagaaagcccataaccaggacctggggtttgctggctcctgcctgccccgattc
agcaccatgccattcatctattgcaacatcaatgaagtgtgccactatgccagatgcaat
gataagtcctactggctctccacgactgcccccattcccatgatgcctgtgggtcagagc
cagattccccagtacatcagccgctgctctgtttgtgaggcaccctcgcaagccattgct
gtgcacagccaagacatcaccatcccacagtgccctttgggctggcgcagcctctggatc
ggttactccttcctcatgcacactgctgccggggctgagggcggaggccagtccctcgtc
tcccctggctcctgccttgaggacttccgggccactcctttcattgagtgcagcggtgcc
cgtggcacctgccactactttgccaacaagtatagtttctggctaaccgcagtggaggag
agacggcagttctgggaagagcctgtttcggaaacactgaaaaccgggcagctccacacc
agggtgagccgctgccaggtgtgcatgaaacacctgtag
DBGET
integrated database retrieval system
