Microtus oregoni (creeping vole): 121437119
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Entry
121437119 CDS
T08307
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04151
PI3K-Akt signaling pathway
morg04382
Cornified envelope formation
morg04510
Focal adhesion
morg04512
ECM-receptor interaction
morg04820
Cytoskeleton in muscle cells
morg04926
Relaxin signaling pathway
morg04933
AGE-RAGE signaling pathway in diabetic complications
morg04974
Protein digestion and absorption
morg05146
Amoebiasis
morg05165
Human papillomavirus infection
morg05200
Pathways in cancer
morg05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
121437119
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121437119
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121437119
09142 Cell motility
04820 Cytoskeleton in muscle cells
121437119
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
121437119
09154 Digestive system
04974 Protein digestion and absorption
121437119
09158 Development and regeneration
04382 Cornified envelope formation
121437119
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121437119
09162 Cancer: specific types
05222 Small cell lung cancer
121437119
09172 Infectious disease: viral
05165 Human papillomavirus infection
121437119
09174 Infectious disease: parasitic
05146 Amoebiasis
121437119
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
121437119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
morg04147
]
121437119
00536 Glycosaminoglycan binding proteins [BR:
morg00536
]
121437119
Exosome [BR:
morg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121437119
Glycosaminoglycan binding proteins [BR:
morg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121437119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121437119
NCBI-ProteinID:
XP_041492890
LinkDB
All DBs
Position
Unknown
AA seq
1569 aa
AA seq
DB search
MQVPEVCLAAGWLLLALCLWEQPAEAAACHGCSPGSKCECSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPAGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMTSLPGPKGDQGYPGPPG
IQGPPGPKGISGPSGPPGQPGLMGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQIGEQKRPIDVEFQKGDQGVPGDRGPPGPPGIPGPPGPPGGVKGEKGEPGEPGKRGKP
GKDGETGQPGIPGLPGDPGYPGEPGRNGEKGQKGDIGPPGPPGLVIPRPDTGVTVGEKGN
IGLPGLPGVKGERGFPGIQGPPGFPGPPGTAVMGPPGPPGYPGERGQKGDEGPPGICIPG
SPGLDGQPGIPGLPGPPGPPGPHLPSRDEICKEGPPGPPGSPGDKGLQGEQGAKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGVPGEKGEKGNAGMTGPKGLPGIPGLPGAPGF
PGSKGDPGDVLTLPGMKGDKGDLGSPGAPGLPGLPGTPGKDGLRGLPGPKGEPGGIAFKG
ERGPPGDPGLPGLPGNMGPMGPVGFGPPGPIGEKGIQGVAGNPGQPGLPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLLGPPGPKGFPGI
PGPPGAPGTPGRMGPDGPPGSPGFPGPKGEPGFGLPGPPGPPGFPGFKGTPGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGSNGQPGPIGPPGLPGIGIQGPPGLPGTPGPIGQPGLNG
IPGEKGDPGPPGFDVPGPPGDRGSPGPPGIPGLIGPPGSPGLPGKAGVPGFPGAKGEIGM
MGLPGPPGPLGIPGRSGAPGIKGDDGMQGQPGLPGPAGEKGGKGEPGLPGPPGPMDPDFL
GSKGEKGEPGLPGVPGLSGPKGYQGLPGDPGQPKLTGQPGSPGLPGPKGDPGLPGPPGLT
GPPGLKGNIGDMGFPGPQGVDGPPGPPGVPGQPGSPGLPGQKGSKGDPGVSGIGLPGLPG
PKGEPGQPGYPGNPGIKGSVGDIGLPGLPGSPGAKGQPGLPGFPGTPGLPGPKGMSGPPG
NPGLPGEPGPVGGGGPPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLLGIPGNPGLPGSKGEPGFQGFPGMPGPPGPPGSPGPALEGPKGTPGPQGPP
GRPGPPGFQGLPGSEGPRGPPGNGAIKGERGNPGPPGQPGLPGLKGDQGPPGLPGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPIGIPGSTGPDGEPGLTGPPGPPGLPGPSGQSIIIKGD
AGPPGVPGQPGLKGPPGFPGPPGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGM
RGLDGPPGPDGLQGPPGPPGTTSVAHGFLITRHSQTTDAPQCPQGTVHIYDGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKG
QSIQPFISR
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcctgaagtgtgcctggccgccggctggctcttgctggccctgtgtctgtgg
gagcagcccgcagaggctgcggcctgccacggatgttctcctggatcaaaatgtgagtgc
agtggtataaagggggaaaagggagaacgaggatttccaggtttggaaggccatccaggt
ctgccaggatttccaggtccagaaggacctccaggacctcggggacaaaagggtgatgat
ggaattcccgggccagcaggaccaaaaggaatcaggggtcctcctggacttccaggattt
ccggggacaccaggtcttccgggaatgccaggccatgatggagctccaggacctcaaggt
atccctggatgcaacggaacaaagggagagcgtggatttccaggcagtcctgggtttcct
ggcttacaaggtcctccaggacctcctgggatcccaggtatgaagggggaaccaggtagt
ataatcatgacatcactgccaggtccaaagggtgatcaaggatacccaggtcctcctgga
atacaaggtccacctggtcccaagggtatatcagggccaagtggtcctccaggacaacca
ggcttaatgggccctcctggtccaccaggcccaccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaaaggtgaacaaggtcttcagggcccaccgggtcca
cctggacagatcggtgaacagaaaagaccaattgatgtagaatttcagaaaggagatcag
ggagttcctggtgatagaggacctcctggacctccaggaatacctggtcctccaggtcct
ccaggtggtgtgaaaggtgaaaagggtgagccaggagagccaggcaaaagaggtaaacca
ggcaaagatggagagactggccaaccgggaatcccaggtttgcctggtgatcctggttac
cctggtgaaccaggaaggaatggtgaaaagggccaaaagggtgatattggcccacctgga
cctcctggactagtaattcctagacctgacactggtgtgaccgtgggagaaaaaggaaat
attgggttacctggtttgcctggagtaaaaggagagcgaggatttcctggaatacaaggg
ccacctggctttcctggacctccagggacagcagtcatgggtcctcctggtcctcctgga
tatcctggagaaagaggccaaaaaggtgatgaaggtccccctggaatttgtattcctgga
tctccaggacttgatggacagcctgggattcctggacttccagggcctcctggtcctccc
ggccctcatttgccatcccgtgatgagatatgtaaagaaggccctccaggccccccagga
tctccaggtgataaaggactccaaggagagcaaggagcaaaaggtgacaaaggtgacacc
tgcttcaactgtattgggactggcatttcagggcctccaggccaacccggtttgccaggt
ctcccaggtcctccaggatctcttggagtccctggagagaagggtgaaaaaggaaatgct
ggaatgactggtccaaaaggattaccaggaatacctggacttccaggtgctccaggcttt
ccaggatctaaaggtgaccctggcgacgtcctcactcttccgggaatgaaaggtgacaaa
ggagacttgggttcccctggagctccagggcttcctggtctacctgggactcctggaaag
gatggattgcgaggactccctggccccaaaggagagcctggtggaattgcttttaagggt
gaaagaggtcctcctggagacccaggtttgccaggtctcccaggaaatatgggacctatg
ggccctgttggctttggacccccaggccctataggtgaaaaaggcatacaaggtgtggca
ggaaatccaggtcagccaggattaccaggtcctaaaggggatccaggccagaccataacc
cagccagggaagcctggcctgccaggtaatccaggcagagatggtgaagtgggtcttcca
ggtgatcctggacttccaggccaaccaggtctgccaggaatacctggtagcaaaggagaa
ccaggtatccctgggattgggcttcttggacctccaggtcccaaaggtttcccaggaatt
ccgggacctccaggagcacctggaacacctggaagaatgggtccagatggcccacctggg
tcaccaggctttccaggaccaaagggagagccaggatttgggttacctgggccacctggg
ccaccaggattcccaggtttcaaaggaacacctggtccaaaaggtgatcgtggttttcca
ggacctccaggtcctccaggacgcactggcttggatgggctacctggaccaaaaggtgat
gttggatcaaatggacagcctggcccaatagggcctcctggactgccaggaattggtatt
cagggaccaccaggactaccaggaactccagggccaatcggccaacctggcttaaatgga
ataccaggagagaagggagatccaggacctccggggtttgatgttccaggaccaccagga
gacagaggtagtccagggccccctggaatccctggcctcataggacctccaggatcaccc
ggtctcccaggaaaagcaggtgttcctggatttccaggtgccaaaggagaaataggtatg
atgggacttccgggcccaccaggacctttgggaattcccggcagaagtggtgctcctggt
attaaaggtgatgatggcatgcaaggtcaaccaggtcttccgggccccgcaggagaaaaa
ggtggtaaaggagaacctggccttccaggtcctcctggaccaatggatccagatttcctg
ggttcaaaaggagagaagggtgagcctggcttaccaggtgttcctggactttcaggacca
aaaggctaccagggtttgcctggagacccagggcaacctaaactgactggacaacccgga
tcgccaggactaccaggtcccaagggtgaccctggtctccctggtccaccgggacttaca
gggcctcctggacttaaaggaaacattggtgacatgggatttcctggccctcaaggtgtg
gatgggccccctggacctcctggagttcctggacaaccaggctctccagggttacctggc
cagaaaggaagtaaaggagatccaggtgtttcaggcattggtcttcccggtcttcctggt
ccaaagggtgaacctggtcagcctggatatccaggaaacccaggtatcaaaggttctgtg
ggagatattggcctgcctggattaccaggaagccctggagcgaaagggcagccaggactg
cctggattcccaggaaccccagggcttcctggaccaaaaggtatgagtggtcctcctggt
aaccctggcctcccaggagagcctggtcctgtaggtggtggagggcctcctgggccacca
ggacctcctggtgaaaaaggcaagccaggtcaagatggcattcctggaccagcaggacag
aagggagaaccaggtcaaccaggctttggaatcccaggacctcctggactcccaggactt
tctggtcaaaagggtgatggaggattacttggcattccaggaaatcctggtcttccaggt
tcaaagggtgaaccaggctttcagggattccctggtatgccaggtcccccaggtcctcct
ggttctcctggtccggctttggaaggtccaaaaggaacccctgggcctcaaggccctcct
gggagaccaggtcctccaggtttccaaggtctaccaggttcagaaggcccccgtggtccc
cctggaaatggagctattaaaggagagaggggaaacccaggcccacctgggcaacccggc
ttacctggtttgaaaggagatcaaggaccaccaggactcccgggtaatcctggccggcca
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggaatg
aaagggcccattggaataccaggctcaactggccctgatggggaaccaggccttaccggg
cccccaggtcctcccgggttacctggtccttcaggacagagcattataatcaaaggagat
gctggtcctccaggggttcctggccaacctggattaaaaggtccaccaggatttccaggc
cctccaggcttaccaggtccaattggccctccaggagatccagggcgcaatgggctccca
ggctttgacggtgcaggagggcgcaaaggagacccaggtctgcctggacagccaggtatg
cgtggattggatggtcccccaggaccagatggattgcaaggacctccaggtccccctgga
accacctcagttgcccatggattcctcatcacacgccacagtcagacaacagatgcccca
caatgcccacagggaacagtgcatatctatgatggcttttctctcctgtatgtacaagga
aataaaagagcccacggtcaagacttgggaaccgctggcagctgccttcgtcgattcagt
accatgcctttcatgttctgcaacattaacaatgtttgtaactttgcttcaagaaatgac
tattcttactggctttccaccccagagcccatgccaatgagcatggaacccctgaagggt
cagagcatccagccattcattagtcggtaa
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integrated database retrieval system
