Microtus oregoni (creeping vole): 121438341
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Entry
121438341 CDS
T08307
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
morg04515
]
121438341 (Dscaml1)
Cell adhesion molecules [BR:
morg04515
]
Immunoglobulin superfamily
DSCAM family
121438341 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Receptor_2B4
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
SseB
Motif
Other DBs
NCBI-GeneID:
121438341
NCBI-ProteinID:
XP_041494572
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MWLVTFLLLLDSLHKARPEDVGTSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRIK
AVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHG
GLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTG
HAVELPCAASGYPIPAIRWLKDGRPLPADSRWAKRITGLTISDLRTEDSGTYICEVTNTF
GSAEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEA
ISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDG
GVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLSDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKA
MFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA
TKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPA
VKWTKDSEDSAIPMSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSF
KLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNL
QGWNNGGCPITTIVLEYRPKGTWAWQGVRANSSTEVFLTELREATWYELRMRACNSAGCG
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFVVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYTKSEAFFRKADGREPC
PVVPPREASMRNLPRAYHTQARHLTLDPASKPLGLPHPGAPAATSTATLPQRTLAMPAPP
AGTAPPAPGPTPSEPPPAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTPGVGRSQK
QGTGAYSKSYTLV
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaactttcctcctgctcctggactctttacacaaagcccgccccgaggat
gttggcaccagcctctactttgtaaatgactccctgcagcaggtaaccttctccagctct
gtgggtgtggtggtgccctgcccggccgcgggctcccccagcgcggctcttcgatggtac
ctggccacgggggacgacatctacgatgtaccgcatatccggcacgtgcatgccaacggg
actctgcagctctaccccttctccccctccgccttcaatagctttatacacgacaacgac
tatttctgcaccgcggagaatgcagccggcaagatccggagccctaacattcgcatcaaa
gcagttttcagggaaccctacaccgtccgggtggaggatcaaaggtcaatgcgtggcaac
gtggccgtctttaagtgcctcatcccctcttcagtgcaggaatatgttagtgttgtgtcc
tgggagaaagacacagtctccatcactccagaaaacaggtttttcatcacctcacacggt
gggctctacatctcagacgtgcagaaggaagatgctctctccacctaccgctgcattact
aagcacaaatacagtggggagactcgtcagagcaacggggctcggctctctgtgacagac
cctgcagagtccatacccaccatcctggatggattccactcccaggaagtatggaccggc
cacgcagtggaactaccctgtgctgcctctggctaccccatccctgccatccgctggctc
aaagatggccggcccctccctgctgacagccgctgggctaagcgtatcacagggctgacc
atcagtgacctgcgtactgaggacagtggcacctacatctgtgaggtcaccaacaccttt
gggtcggcagaggccaatggcatcctcacagtcatcgacccccttcatgtgaccctgaca
ccaaagaagctgaagacgggcatcggtagcacggtcatcttgtcctgcgccctcacaggc
tccccagagttcaccatccgctggtaccgcaacactgaactggtgctgccgggggaggcc
atctccatccgcgggctcagcaacgaaactctgcttatctcctcggctcagaagagccac
tcgggagcctaccagtgctttgccactcgcaaggcccagacagctcaggactttgccatc
attgtgctagaagacggcacgccccgcatcgtctcatccttcagcgagaaggtggtcaac
cccggggagcagttctcactgatgtgtgctgccaagggcgccccgccccccacggtcacc
tgggccctggacgacgagcccatcgtgcgggatggaagccaccgcaccaaccagtacacc
atgtccgacggcactaccatcagccacatgaacgtcacgggcccccagatccgggatggg
ggcgtgtaccggtgcacagcgcggaactcggtgggcagtgctgaatatcaggcgcgaata
aacgtaagaggaccccccagcatcagggccatgaggaacatcaccgccgtcgctgggcgg
gacacactcatcaactgcagggtcatcggctacccctactactccatcaaatggtacaag
gacgccctactgctgccggataaccaccgccaggtggtgtttgagaacgggactctcaag
ctgagcgacgtgcagaaaggcatggatgagggcgagtacctgtgcagtgttctcatccag
ccgcagctttccatcagccagagcgtccacgttgccgtcaaagtgccccctctgatccaa
cccttcgagttcccgcctgcctccatcggccagctgctctatatcccctgtgtggtgtcc
tcgggggacatgcccatccgcatcacctggagaaaggacggacaggtgatcatctcgggc
tcaggcgtgaccatcgaaagcaaggaattcatgagctccctgcagatctccagcgtctcc
ctcaagcacaatggcaactacacttgcatcgccagcaatgcagcggccaccgtgagccgg
gagcgtcagctcatcgtgcgtgtgccccctcgatttgtggtgcagcccaacaaccaggat
ggcatctatggcaaagctggggtgctcaactgctcagtagatggctacccaccaccgaag
gtcatgtggaagcatgccaaagggagtgggaacccccagcaataccacccagtgcccctc
actggccgcatccagatcctgcccaacagctccctgctgatacgccatgtcctagaagag
gacattggctactacctctgccaggccagcaacggtgtgggcaccgacatcagcaaggcc
atgttcctcaccgtcaagatcccagccatgatcacctcccaccccaacaccaccatcgcc
atcaagggtcatgccaaggagctgaactgcaccgcgcggggcgagcggcccatcattatc
cgctgggagaagggggacacggtcatcgacccagaccgagtcatgcggtatgccattgcc
accaaggacaatggtgatgaagtggtctccacacttaagctcaagccagctgaccgtggg
gactccgtgttcttcagctgccatgctatcaactcatatggggaggaccggggcttgatc
cagctcactgtgcaagagccccctgatcccccagagctggagattcgagaggtaaaagcc
cggagcatgaacctgcgctggactcagagatttgacggaaacagcatcatcaccggcttc
gatattgaatacaagaataaatcagattcctgggattttaagcagtccacacgcaacatt
tccccaaccattaaccaggccaacatcgtggacttgcacccagcatctgtgtacagcata
cgcatgtactccttcaacaagattggccgcagcgagccgagcaaggagcttaccatcagc
acggaagaggctgctcctgacggtcccccgatggatgtcaccctgcaaccagtgacttca
cagagcatccaagtgacctggaaggcacccaagaaggagctgcagaatggagtcatccgg
ggataccagattgggtaccgggaaaacagccctggcagcaatgggcagtacagcatcgtg
gagatgaaggccaccggggacagtgaggtctacaccctggataacctcaagaagtttgct
caatatggcgtggtggtgcaggccttcaaccgggcaggcacagggccctcatccagtgag
atcaatgccaccaccttggaggatgtgcccagccaacccccagagaatgtccgagccctg
tccatcacttctgacgtggctgtcatctcttggtcggagcccccacgaagcaccctcaac
ggtgtcctcaaaggctatagggtcatcttctggtcgctctatgttgatggggagtggggt
gagatgcagaacgtcaccaccacaagggagcgagtggagctgcggggcatggagaagttc
accaactacagcgtccaggtgctagcctacacgcaggccggggacggtgtgcgcagcagc
gtgctctatatccagaccaaggaagatgttccaggtccccctgctggcatcaaagctgtc
ccttcatcagctagcagtgtggtcgtttcctggctgcctccaaccaagcccaatggggtg
atccgcaagtacaccatcttctgttccagccccgggtctggccaaccggctcccagcgag
tacgagacgagtccagaacagctcttctacaggatcgcccacctgaaccggggacagcag
tacctgctgtgggtggccgcggtcacctctgcaggcagggggaacagcagcgagaaggtc
accattgagcctgctggcaaggccccagcaaagatcatctcattcggaggcactgtaaca
acaccctggatgaaagatgtccggctgccttgcaattctgtgggagacccagccccagct
gtgaagtggaccaaggacagtgaagactcggcaatccccatgtccttggatggacaccgg
ctcatccacacaaatggcacgctgctgcttcgtgctgtgaaggctgaggactcgggttat
tacacctgcacggccaccaacactggtggctttgataccatcatcgtcaacctgctggtg
caagttcccccagaccagccccgcctcactgtctccaaaacctctgcctcttccatcact
ctgacctggattccaggggacaatggaggcagctctatcagaggcttcgtgctgcagtac
tcagtggataacagtgaggagtggaaggatgtgttcatcagctccagcgagcgctccttc
aagctggacagccttaagtgcggcacgtggtacaaggtgaagctggcagccaagaacagt
gtaggctctgggcgcatcagcgagatcatcgaggccaagactcacgggcgggaaccctcc
ttcagcaaagaccaacacctcttcacccacatcaactccacacacgctcggcttaacctg
cagggctggaacaatggaggctgccccattacgaccattgtcctggagtaccggcccaag
gggacctgggcctggcagggcgtccgggccaatagctccacagaggtgtttctgacagag
cttcgagaggccacgtggtacgagctccgcatgagggcttgcaacagcgctggctgtggc
aacgagaccgcccagtttgccaccctggactacgatggcagcaccatcccacccatcaag
tctgctcaaggtgaaggggatgatgtgaagaagctgttcaccatcggctgccctgtcatc
ctggccaccctaggggtggccctgctctttgttgtacggaagaagaggaaggagaaacgg
ctgaagaggctccgagatgcaaagagtttggcagaaatgctgataagcaagaacaatcga
agctttgacacccctgtgaaagggccaccccagggtccacggctccacattgacatcccc
agggtccagctgctcattgaggacaaggagggcatcaagcagctgggagatgacaaggcc
accatccccgtaaccgacgctgagttcagccaagcggtcaatccacagagcttctgtact
ggtgtctctctgcaccacccagccctcatccagagcacaggacccctcatcgacatgtca
gacatccggccaggaaccaacccagtgtccaggaagaacgtgaaatcagcccacagcaca
cggaaccggtactcaagccagtggaccttgaccaagtgccaggcctccacccctgcccga
accctcacttctgactggcgcactgtgggttcccagcacggcgtgactgtcaccgagagt
gacagctacagtgccagtctgtcccaagacacagacaaaggacggaacagcatggtgtcc
actgagagcgcatcctccacctacgaggagctggcccgggcctacgagcacgccaagctg
gaggaacagctgcaacatgccaagtttgaaatcacggaatgcttcatctcagacagctcc
tctgaccagatgaccacaggcaccaacgagaacgccgacagtatgacatccatgagcaca
ccctcagaacctggcatctgccgcttcaccgcctctccacccaagccgcaggatgctgac
cggggcaagaatgtggctgtgcccatccctcaccgagccaacaagagtgactactgcaac
ctgccgctgtacaccaagtcagaggccttcttccgaaaggcagacgggcgggagccctgc
cctgtggtcccaccccgagaggcctccatgaggaatctgcctcgagcctaccacacccag
gcccggcacctcactctggaccctgccagcaagcccttgggcctcccccatccaggggcc
cctgctgccacctctacggccaccttacctcagaggactctggctatgccggcaccccca
gctggcacggcacccccagcacctggtcctacccccagtgagcctcctcctgcccctagt
gctgcccctccagcccccagcactgaacctccaagggccggaggcccacacaccaaaatg
gggggttccagggactcgctacttgaaatgagcaccccaggggtagggcgatctcagaaa
caggggactggagcctactccaaatcctacaccctggtgtag
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integrated database retrieval system
