Microtus oregoni (creeping vole): 121438582
Help
Entry
121438582 CDS
T08307
Symbol
Chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121438582 (Chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
morg03036
]
121438582 (Chd8)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121438582 (Chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121438582
NCBI-ProteinID:
XP_041494770
LinkDB
All DBs
Position
Unknown
AA seq
2584 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGGVDVGN
SSASDLVPQPEDTAPPELPKESTAPAPESLTLHDYTTQPASQEQPAQPVLQTSVPASGLL
QVSKSQEILSQGNPFMGVSATAVSPSNTGGQPSQSAPKIVILKAPPNSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLATKVPGSQAAVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGAAGPPLKPAVTLTSTPTQGESKRITLVLQQPQTGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPQPPPAAQPLTLSSVQQAQIMGPGQSPGQRLSVPLKMVLQPQAGSSQGASSGLSVVK
VLSASEVAALSTPANCAPHPGGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKNKTSGASKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKPEPIIPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KSFIWDLISPAENGKTKELQNHSVFDVSPFPGLSIPVPRGRKGKKVKSQNTFDIHKADWI
RKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWF
PVVDQLEVPTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEH
RVLDNFSDLVEGIDFDKDCEDPEYKPLQGPPKDPEDEGDPLMMMDEEISVIDGEEAQVTQ
QPGHLFWPPGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARR
EKQQRWTRREQTDFYRVVSTFGVEYDPDNMQFHWDRFRTFARLDKKTDESLTKYFHGFVA
MCRQVCRLPPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLAL
CQPPGLELPKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGA
SAASLSRCSTPLLHQQCPSRTASPSPLRPDAPVEKSPEETAVQVPSLESLTLKLENEVVA
RSRLAPQDYEMRVASSDTTPLPRSIPPVKLEDEEDSDSELDLSKLSPSSSSSSSSSSSSS
TDESEDEKEEKLTADRSRPKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRASE
WPKDRVLINRIDLVCQAVLSGKWPSIRRSQEMTTGGILGPGNHLLDSPSLTPGEYGDSPV
PTPRSSSAASMVEEEASAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHRLMAN
GVMGDGHPLFHKKKGSRKKLVELEVECMEEPNHLDLNLETRIPVINKVDGTLLVGEEAPR
RAELEMWLQGHPEFAVDPRFLAYVEERRKQKWQRCKKNNKTDLNCLGMEPIQPANSRNGK
KGHYAETAFNRVLPGPIAPENSKKRVRRTRPDLSKMMALMQGGSAGSLSLHNTFQHSSGN
LQSVSSLGPSSTTSATLPFMPFVMGGAAASPHVDSSTMLHHHHPHPHPHHHHPGLRTTGY
PSSPATATSGTALRLPTLQHEDDEEEEEEDDDLSQGYESSERDFSLIDDPMMPANSDSSD
DADD
NT seq
7755 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggatttgtttgatgacccgaatttatttggcctggactccctg
actgatgacagctttaatcaggtcactcaagaccccattgaagaagcacttggactgcca
agctctctggactccttggatcagatgaaccaagatggcggaggtgttgatgtgggaaat
tcatcagcaagtgacctggttccccaaccagaggatacagctcctcctgaacttcccaaa
gaatccacagctccagctccagaatccttaaccttgcatgattataccactcagcccgcc
agccaagaacagccagcccaacctgtcttgcagacgtcagtgccagcatcaggacttttg
caggtctccaagagccaagagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctctcccagtaatactggagggcaaccatctcagtcagcccctaagattgtt
atccttaaagccccaccaaactcctcagtcacgggtgcccatgtggcacaaattcaggcc
caaggtatcaccagtacggctcagcccctagtggctggcacagccaatggtggaaaagtc
acctttaccaaagtgctaactggtacaccccttcgaccaggtgtctccattgtctctggt
aatacagtgttggccaccaaggtccctgggagccaggctgctgttcagcgcattgtccag
ccaagccgaccagtaaagcagctagtcctccagccagttaagggttcagctcctgctgga
aaccctggggctgcaggacccccactgaagcctgcagtcacactgacttctacacctacc
cagggtgaatcgaaacgcatcaccttggtcctccagcagccacagaccggaggtccccaa
ggacatcggcatgttgtgttagggagtctaccaggcaagatagtgttacagggcaaccag
ctggcagccttgactcaagccaagaatgcccaggggcagcctgccaaagtcgtaactatt
cagctgcaggtacagcagccacagcagaaaatccagattgtaccccagcctccttcttca
cagccacaaccacagccgccacccgcagcccagcctctgacactttcctctgtgcagcag
gctcagataatgggaccaggacaaagcccaggacagaggctttcagtgccactcaaaatg
gtgctgcagccacaggctggctcttctcagggagcctcttctggcctctctgtggtgaaa
gttctaagtgccagtgaagtggcagccctgtccacaccagcaaactgtgctcctcatcct
ggggggaagactggaatggaggaaaaccgcaggctggagcaccagaaaaagcaagagaaa
gcaaatcggattgtagcagaggccattgctagggcccgggctcggggcgagcagaacata
cctcgagtcctgaacgaggatgagctgcctagcgtccggccagaggaggaaggtgaaaag
aaacgcaggaagaagagcagcggagaaaggctgaaggaggaaaagccaaagaagaacaaa
acctctggtgcctccaaaacgaagggcaagagtaagctgaataccatcactccagtcgtg
ggcaagaagagaaaacgtaacacgtcttctgacaactctgatgtggaagtcatgcctgca
cagtcaccccgggaggatgaagagagcagcatccagaagagacgttcaaaccgccaagtt
aaacgaaaaaaatatacagaggacttggatataaagataacagatgatgaagaagaggag
gaggtcgatgtaactggtccaataaaacccgagcccatcatcccagaaccagtgcaggaa
cctgatggagagactctgccttccatgcagttctttgtggagaatcccagtgaagaagat
gctgctattgtggacaaagtgctttccatgcgagttgtgaagaaagagcttccttctgga
cagtacactgaggccgaggagttttttgtcaagtataagaactactcctacctgcactgt
gagtgggcaactatctcccagctggagaaggataagaggatccatcagaaactaaagcgg
ttcaaaacaaaaatggctcagatgagacacttctttcatgaggatgaagaacccttcaat
ccagactacgtagaggttgataggatactggacgagtctcacagtgttgacaaggataat
ggtgagcctgtcatctactacctggtgaagtggtgctctctgccctacgaggacagtaca
tgggagctaaaagaggatgttgatgagggcaagattcgagaatttaagcggatccagtca
aggcacccagaactcaaaagagtgaatcgtccacaggcaagtgcctggaagaaattggag
ctgtcacatgaatataaaaacaggaaccaactgagggaatatcagttagaaggagtcaat
tggctcctcttcaactggtataacaggcagaactgcatcctcgctgatgaaatgggatta
ggcaaaaccattcagtcgattgccttcctgcaggaggtatataatgtaggcatccacggt
ccctttttggtcattgctcccttgtccaccattactaactgggagcgagaattcaacacg
tggacggagatgaacacgattgtgtaccatggcagcctggcaagcaggcagatgattcag
cagtatgaaatgtactgtaaggattctcggggtcgcctcatcccaggtgcatataagttt
gatgccttgatcaccacttttgagatgattttgtcagactgtcctgagcttcgtgaaatt
gagtggcgctgtgttatcatcgatgaagcccacagactgaagaaccgtaattgcaagcta
ctcgatagtctgaagcatatggacctggagcataaagtgttactcacaggaacaccactg
cagaacactgtagaggaactcttcagcctgctccatttcttggagccttcacagttccct
tcagaatcagagttccttaaggattttggagatctcaagacagaggagcaggttcaaaaa
ctacaggccattctcaagccaatgatgctgagaagactcaaagaggatgtggaaaaaaat
ttggctcccaaacaggaaactatcattgaagtagagcttaccaacatccagaagaagtac
taccgagccattttagagaagaatttctccttcctttccaaaggagcaggtcacaccaac
atgcctaacctgctgaacacgatgatggagttacgcaagtgctgtaaccacccgtacctc
atcaatggtgcagaagaaaaaatcctgatggagtttcgggaagcttgccatattatacct
caagatttccacttgcaggccatggttcggtcagctggcaagttggttcttattgacaag
ttacttccaaagcttaaagctgggggccataaagttctgatcttttcccagatggtacgc
tgtctagatatcctagaggattatctaatccagaggaggtacttatatgaacgaattgat
gggcgagttagaggcaaccttcgacaggctgctattgaccgctttagcaagcctgattca
gaccgctttgtctttttgctgtgcacccgtgctggtggacttggtattaatcttacagct
gctgatacttgtattatctttgattcagactggaatccacagaatgacctgcaggcccag
gcacggtgtcatcgaattggacagagcaaagctgtgaaggtttaccgactcatcactcgt
aattcctacgagagagagatgtttgataaagctagcctcaagttgggattggataaggct
gtgctccagtccatgagtggtcgggatggcaacatcactggaattcaacagttctccaaa
aaagagattgaagatctcttaaggaaaggcgcatatgccgccataatggaggaagatgat
gagggttctaagttttgtgaggaggacatagaccagatcttactaaggcggaccacaacc
atcactattgagtctgaagggaaagggtccacctttgctaaggcaagctttgttgcttct
gaaaataggacagatatttccctggatgatccaaacttttggcaaaaatgggcgaaaaag
gcagacctagacatggatctgctgaatagcaagaataacttggtgattgacacgcctcga
gtgcggaaacagactcgacacttcagcactctgaaagatgatgacctggttgagttttct
gatttggaaagtgaggatgatgagcggccgcgttcccgaagacatgaccggcatcacacc
tacgggcgcactgactgctttcgtgtggaaaagcatctcctggtatatggttggggacgt
tggcgagatattttgtctcatggacgctttaagcgacgcatgactgaaagagatgtggag
acaatatgccgtgccatccttgtgtactgtcttctgcactaccgtggggatgagaacatc
aaaagcttcatttgggacttgattagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcagtctttgatgtctcccctttcccaggtctgtctatccctgtgccacgtggg
cgtaaggggaaaaaagtaaagtcacaaaatacttttgacattcataaggcagactggatc
cggaaatataaccctgatactctgttccaagatgagagttataagaagcacttgaaacat
cagtgtaacaaggtactgttgagagtaaggatgctgtactatctgaggcaagaagttatt
ggagaccaagcagagaaggtgttggggggtgccatcgcaagtgagattgacatatggttc
ccagtagtggatcagctggaagttccaacaacgtggtgggacagtgaagctgataagtcc
ctgctcattggcgtctttaagcatggctatgagaaatataacaccatgagggcagacccg
gccttgtgcttcctggaaaaggctggcaggccagatgacaaagctattgcagcggaacat
agagtgctagataatttctctgacctggtggaagggattgactttgataaggattgtgaa
gatcctgaatataagccactgcagggtcccccaaaggacccagaggatgagggtgatccc
ttgatgatgatggatgaggagatctcagtcattgatggagaagaagcccaggtgactcaa
cagccagggcatttattctggcctccgggctctgccctaacagccaggctccgccgccta
gtcacagcctatcagcgcagctacaagagagaacagatgaagatagaggcggcagagcgt
ggggaccggagacgccgacgttgtgaagcagcctttaaactcaaagaaattgcaaggcgg
gaaaagcaacaacggtggacaaggcgtgagcaaactgatttctatcgagtagtgtctacc
tttggtgtagagtacgaccctgacaacatgcagtttcactgggatcgcttccgcactttt
gctcgactggacaagaaaacagatgaaagccttaccaagtacttccatggctttgtggcc
atgtgtcgacaagtgtgccgccttcctccagctgctggcgatgaacccccagaccctaat
ctgttcattgagcccattactgaagagagagcctcgcggaccctctaccgtattgaattg
cttcggcgcttacgggaacaagttttatgccacccccttttagaagatcggctggcattg
tgtcagcctccaggtcttgaattgcccaaatggtgggaacctgtccgtcatgatggggag
cttctacgaggggcagcccgccacggagtgagccaaacagactgcaacatcatgcaggac
ccagacttctctttcctggctgccaggatgaattatatgcagaaccatcaggcaggagcg
tcagctgcgtccctgtcgcgatgctctactccactgctgcaccagcagtgtccctcacgc
actgcctcaccatcacccctgcgcccagacgctcctgtggaaaagtcacctgaggagact
gctgtccaggtccccagtctggagagtctgactttaaagctagaaaatgaggtggtggct
aggagccgactcgccccacaagactatgaaatgcgtgtagcctcttcggatacaacccct
ttgccccgaagtattccaccagtcaaactggaggatgaggaggattcagactctgagctg
gacttgagcaagttgtcaccgtcgtcctcttcttcatcctcatccagctccagctccagc
actgacgagagtgaggacgaaaaggaagagaagttaactgctgaccggtcccgtccgaag
ctctatgatgaagagagccttctgtccctcactatgtcccaagatggatttccaaatgaa
gatggagaacagatgacccctgagctgctgctgctgcaggaaagacaaagagcctctgaa
tggcccaaggatcgtgttctgataaaccgcattgacctcgtctgccaggctgtactctca
ggaaaatggccttctatccgccggagtcaggaaatgacaacaggaggaattttggggcca
ggcaatcatttattagacagcccctctttgaccccaggagaatatggggactcgccggtc
cccaccccacgaagtagtagtgcggcttccatggtagaggaggaagcatctgcagtcacc
acagcggcagcccagtttaccaaacttcgccgaggcatggatgagaaggagtttacggtt
cagatcaaagatgaagaagggctgaagctaacattccagaaacacagactgatggctaac
ggtgtgatgggagacggacacccactgttccataagaagaaggggagcaggaaaaagctg
gtggagctggaggtggagtgcatggaggagcctaatcacctcgatctgaacttggagacc
cggatccctgtcatcaataaggtggatggtactttgctggtgggtgaggaggcccctcgc
cgggcggaactggagatgtggttacagggtcatccagagtttgctgttgatccccgattt
ctagcgtatgtggaggaacgcagaaaacagaagtggcagagatgtaaaaaaaataataag
acagacttgaactgtttgggaatggaaccaatacagcctgccaactctagaaatgggaag
aagggacactatgcagaaactgcattcaaccgggttttgccagggcctattgcaccagag
aacagcaagaagcgtgtccgtaggacaagaccagacctttctaagatgatggccctgatg
cagggtggaagcgctgggtccctgtctctgcataacacctttcagcacagcagtggtaac
ctacagtctgtgtcgtctctcggtcccagcagcaccacttctgcaactctgccgtttatg
ccgtttgtgatgggtggtgcagcagcgtcccctcatgtagactccagcaccatgcttcat
caccaccatccccacccccacccccaccatcaccatccaggcttgagaaccactggctac
ccttcttcaccagctaccgccacctctggtactgccttgcggttaccaacactgcaacat
gaggacgatgaggaagaggaggaagaggatgatgatttatctcagggctatgagagctca
gaaagggacttctcactcatcgatgatcctatgatgccagccaactcagactccagtgat
gatgctgatgactga
DBGET
integrated database retrieval system
