Microtus oregoni (creeping vole): 121438934
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Entry
121438934 CDS
T08307
Symbol
Sdc1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04512
ECM-receptor interaction
morg04514
Cell adhesion molecule (CAM) interaction
morg04820
Cytoskeleton in muscle cells
morg05144
Malaria
morg05205
Proteoglycans in cancer
morg05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121438934 (Sdc1)
04514 Cell adhesion molecule (CAM) interaction
121438934 (Sdc1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121438934 (Sdc1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
121438934 (Sdc1)
09174 Infectious disease: parasitic
05144 Malaria
121438934 (Sdc1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
121438934 (Sdc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
morg04131
]
121438934 (Sdc1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
morg04090
]
121438934 (Sdc1)
00535 Proteoglycans [BR:
morg00535
]
121438934 (Sdc1)
Membrane trafficking [BR:
morg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121438934 (Sdc1)
CD molecules [BR:
morg04090
]
Proteins
121438934 (Sdc1)
Proteoglycans [BR:
morg00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
121438934 (Sdc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
Romo1
Motif
Other DBs
NCBI-GeneID:
121438934
NCBI-ProteinID:
XP_041495376
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MRRAALWLWLCALALRLQPVLPQIVAVNVPPEDQDGSGDDSDNFSGSGAGALPDVTLPRQ
TSPSLKDVWLLTATPAAPEPTSRIAEAAFTSILSTVEKPEEGEPVLEAVDTGLTAQDKEM
EVTTKPRETTQLPITQRVSTVRATTVQAVTSHPHRDVQPGLHETLVPTAPGQPDHQPPSA
TEGGTSVVKEVVEDGATNQLPTGEGSGEQDFTFETSGENTAVAAIEPDQRNQQPVDEGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVAFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPTKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctctggctctgcgcgttggcgctgcgcctgcagcctgtc
ctcccgcaaatcgtggctgtaaacgtacctcctgaagatcaggatggctctggggacgac
tctgacaacttctctggctcgggcgcaggtgctttgccagacgtcactttgccgcggcag
acttctcccagtttgaaggatgtgtggctcctgacagccacacccgcagcaccagagccc
accagcaggattgccgaggctgccttcacctccatcctgtcaactgtagagaagcctgag
gagggagagccagtgcttgaggcagtggacactggcctcaccgctcaggacaaggaaatg
gaggtcaccaccaagcccagggagaccacacaactcccaatcacccaacgggtctcaaca
gtcagagccaccacagtccaggctgtcacatctcatccccacagagatgtgcaacctggc
ctccatgagaccttggttcccacagcacctggccagcctgaccaccaacctccaagtgcg
acagaaggaggtacttctgtcgtcaaagaagttgtcgaggatggagctaccaatcaactt
cctacaggggagggctctggcgagcaggacttcacctttgaaacatctggggagaacaca
gctgtggcggccatagagcctgaccaacggaatcagcagccagtggatgaaggagccaca
ggtgcctctcagggccttttggacaggaaggaagtgctgggaggtgtcatcgccggaggc
ttggtggggctcatctttgccgtgtgcctggtggctttcatgctgtaccggatgaagaag
aaggacgaaggcagctactccttggaggaacccaaacaagccaatggcggcgcctaccag
aaacccaccaaacaggaagagttctacgcctga
DBGET
integrated database retrieval system