Microtus oregoni (creeping vole): 121439940
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Entry
121439940 CDS
T08307
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
121439940 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
morg03036
]
121439940 (Smarcad1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121439940 (Smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
HHH_3
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
121439940
NCBI-ProteinID:
XP_041496502
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEAAPQTSQPAPSSPISLSAEEENAEGEVSRANTPDSDIT
EKTEDSSVPEPPDNESKASLSCFQSQRGIQYIDLSSDSEDVAPNCSSTIQEKKFNKDTVI
IVSEPSEDEESHDLPSVTQRNDVAELEDLSELEDLKDAKLQTLKELFPQRNDNDLLKLIE
STSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEAYEEDELNDDQSLKKPRVERGEESNES
AEASSSWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDAQCAS
QSEVTNGKEVAKNQNYSKNTTKTKMKQKISMKPQNGFNKKRKKNVFNPKKAGEDSEYDSG
SDAGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIAELTLIPQCSQKKAQKIIELRPFNS
WEALFTKMSKINGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGW
NIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEG
NKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTT
YNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNN
LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRV
KEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMAN
HPLLHRQYYTPEKLREMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHILCKQYRHINNY
QLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGK
TQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRC
HRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEADEGSMPADIATLLKTS
MGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggaataagattgaggaagct
cccgaagcagcccctcagacctcccagcccgctccttcatcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaaacaccccagactcagatataact
gaaaaaacagaagattctagtgttccagaacctccagacaatgaaagtaaagcaagttta
tcgtgtttccaaagtcaaagaggaatacagtatattgatttatcttctgatagtgaagat
gttgctccaaattgttccagtacaattcaagagaaaaaattcaacaaagacacagtgatt
atagtttcagagccatctgaagatgaagagtctcatgaccttccttctgtaacacaaaga
aatgacgttgcagaactggaagacctttcagaattggaagatcttaaagatgctaagctt
cagacactgaaggaacttttcccacaaagaaatgacaatgatctcctaaagttgattgaa
tcaacaagcactatggatggagccattgctgctgccttgctgatgtttggtgatgcaggt
ggtggacccagaaaaagaaaattatcttcttcttctgaggcatatgaggaggatgaattg
aatgacgatcagtctctaaagaagccacgagtggaacgtggagaagaatcaaatgagtct
gcagaagccagcagcagctgggagaagcaggaaagtattgtattgaaattgcaaaaggaa
tttccaaattttgataaacaggaactaagagaagtgctcaaggaacatgagtggatgtac
acagaagccttggagtctctcaaagtgtttgcagaagatcaagatgcacagtgtgcttca
caaagtgaggttacaaatggaaaagaagttgcaaagaatcaaaattattctaaaaacaca
actaaaactaaaatgaaacagaaaatttctatgaaaccacaaaatggttttaacaagaaa
cgtaagaaaaatgtgtttaatcctaagaaagctggagaagattccgagtacgattcaggt
tctgatgctgggagttccctggacgaggactatagcagcggtgaagaagtgatggaggat
ggctataaaggcaaaattctccacttccttcaagatgcttcaattgctgaactgactcta
attcctcagtgttctcagaagaaggctcagaaaataatagaactccggccctttaatagt
tgggaagctctgtttacaaagatgtccaaaatcaatggcctatctgaagatttgatatgg
aattgtaaaacactaattcaagaaagggatgtagttataagacttatgaacaaatgtgaa
gacatttcaaataaattgaccaaacaagtaaccatgctcaccggaaatggaggcggatgg
aacatagagcagccctccattctaaaccaaagtttatcactcaagccctatcagaaggtt
ggtttgaattggctggcactggtgcataaacatggacttaatggcattttggcagatgaa
atgggtctaggaaaaaccatccaagccattgcattcctggcatacctctttcaggagggt
aataaagggcctcatttgattgttgttccagcatcaaccatagataactggctaagagaa
gttaacttatggtgtcctactttaaatgtgctctgttactatggttctcaagaagagcgt
aaacaaattagattcaacatccataataaatatgaagattacaatgtaattgttacaacg
tataattgtgcaatcagcagctctgatgatcgcagtctctttcgacggctgaaactgaat
tatgcaatttttgatgaaggccatatgctgaagaatatgggctctatccgctaccagcac
ttaatgacaattaatgccaataaccgtttactgctcacgggcacacctgtgcagaataat
ctgctagagctcatgtcattgttgaattttgttatgccacacatgtttagtagtagcacc
agtgaaatccgaaggatgttttcttctaaaacgaaaccagcagatgagcagagcatatat
gaaaaggagagaatagcacacgcaaagcaaataataaagccttttattctcagaagagtc
aaagaggaggttctcaagcagctgcctcctaagaaggatcagattgagctgtgtgcaatg
tcagagaagcaggagcaactctacttgggccttttcaacagacttaaaaagtccatcaac
aatctggaaaaaaacacagaaatgtgcaatgtcatgatgcagttgagaaaaatggccaac
caccctttgttacatcgccagtattacacacccgagaagctgagggagatgtctcagcta
atgctgaaggaacctacacattgtgaggctaaccctgacctgatctttgaagacatggaa
gttatgacagactttgaactacatatactttgtaaacagtatcgacacattaataattac
cagttagacatggatttgattttagattctgggaaattccgagccttaggatgcatcttg
tctgaattgaaacagaagggtgatagagttgtattattcagccagtttaccatgatgctg
gatatattagaggttctcttaaagcatcatcaacataggtacctacgattagatggaaag
actcagatttcagaaaggattcatctaattgatgagtttaatacagatatggatatcttt
gtatttctcttgtcaaccaaagctggtggattaggaataaatctgacttcagcaaatgtt
gttatacttcatgacattgattgcaatccatacaatgacaaacaagcagaagacaggtgc
catagagttggtcagactaaagaagtattagttattaaattaataagccaaggaaccatt
gaagagtccatgctaaaaattaaccaacagaagctgaaactagaacaagatatgaccaca
atagatgaagctgatgaaggaagtatgccagcagatatagccacattactaaaaacatcg
atgggcctgtga
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