Microtus oregoni (creeping vole): 121440456
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Entry
121440456 CDS
T08307
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121440456
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
morg01009
]
121440456
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
morg04515
]
121440456
Protein phosphatases and associated proteins [BR:
morg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121440456
Cell adhesion molecules [BR:
morg04515
]
Cadherins
Protocadherins
121440456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
SPAR
Motif
Other DBs
NCBI-GeneID:
121440456
NCBI-ProteinID:
XP_041497148
LinkDB
All DBs
Position
Unknown
AA seq
1349 aa
AA seq
DB search
MDLLSGTYIFAVLLACIVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLTPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTAARIDREKLCTGILVDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYSLPAAIDPDVGINGVQIYHLIK
GQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNGPVFLENEIEVSIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLF
HLNTTTGLITVKEPLDREESPSHKLLDLATDGGSTPARAMVLVNVTDINDNAPSIDIRYI
VSPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNS
PGAQLTKVSATDADSGRNAEINYLLGFDARPEFDLDRRTGILTAVKKLDREKQEKYYFTV
LAQDNGIPPLMSNATVFVTVLDQNDNSPLFTHDEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDVNNQFSIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVT
INVVDVNDNKPIFIDPPSNYSYEWVPPSTNPGTVIFKVVAIDNDTGINAELRYSIVGGNT
KGLFMIEQISGNITLKDKCVVSDLGLHRVIVKAKDLGQPDSLFNIVNVNLFVNESVPNTT
LIYELVRKSIDTPVTESTETPNASSPKTDYVKIMVAIVAGTITVILVIFITAVVRCRQSP
HLKASQKNKQNSEWVTPNPENRQMIIMKKKKKKKKHPPKNLLLNFVTIEEAKPEGADNDR
ASVTLDLPIELEEQTMEKYNWGTTPSTFKPDSPDLARHYKSASPQPAFQIQPETPLNSKH
HIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYSVTTFKTPVSVHARPTIKEMVRSR
TPMKEATTVEIWTHPHPQKRSEGRKTGKSQRRVTFHLPEGSQESISDGGLGDHDAGSLPS
TSHALPLGYPQEEYFDHGAPNNRTEGDGNSDPESTFIPGLKKASEITMQPTVEEASDNCT
QECLILGHSDSCWMPATLTQPSPPQIQTSALCHSPPRTHTSVRRCSPPVTQTIAICHSPP
VTQAIALCHSPSTVQVAPLHHSTPLAQATALHHSPTSAQASAVCYSPPLAQAVVIHHSPP
LTQAVILHRNQAQTTMGLQQGRLQGSGADGLHPLDQGAQGSTRAQFYPMTERLHSDDDSV
KVIPLTTFTSGKQARSSRSDSPIIEEHPL
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgtatcgtgtttcag
tctggcgcccaggagaagaattacacggtccgagaagaaatgccagagaacgtcctgata
ggcgacttgttgaaagacctcaacttgtcgcttactcccgacaagtccttaaccactcct
atgcagttcaaattggtttataaaaccggggatgtaccactgattcgaattgaagaaggt
actggtgagatcttcacaacagctgctcgcattgatcgtgagaaattatgtactggaatc
ttggtggatgcccgttgcttttacgaagtggaggttgccgttttgccagatgaaattttt
agattggttaagatacgctttctgatagaagatataaatgataatgcaccattattcccg
gcaactgtcatcaacatatcaattccagagaactcggcaataaactctcgatattctctt
ccagcagccattgatcctgacgtcggaataaatggagttcaaatctaccatctaattaag
gggcaaaatatttttggtcttgatgtcattgaaacaccagaaggagacaagatgccacag
ctgattgtacagaaggagttagatagagaagaaaaggatacctatgtgatgaaagtaaaa
gttgaagatggtggatttcctcaaagatccagtacagctattttgcaagtaagtgttgct
gatacaaatgacaatgggccagtctttttagagaatgaaattgaagtcagtataccagag
aatgctcctgtaggttcttcagtgacacagctccacgccacagatgctgatataggtgaa
aatgccagaattcacttttatttcagcaatctagtctccaacattgctaagagactgttt
caccttaataccaccactggacttatcactgtcaaagaaccactggatagagaagaatca
ccaagccacaaattactggatttggcaactgatggtggatcaacaccagcaagagctatg
gttctggtaaatgttacagatatcaatgataatgccccatcaattgacataagatacatt
gtcagtccaaccaatggcactgtgcttctttcagagaatgctccacttaacacgaaaatt
gctctcataactgtcatggataaagattctgaacataatggtagagtgacatgcttcaca
gatcatgaagttcctttcagattacgaccagtattcagtaatcagttcctcctggaaact
gctgcatttcttgactttgagtccacaagagaatatgctatcaaattactggctgccgat
gctggcaaacctcctttgaatcagtcatccatgcttctgatcaaagtaaaagatgaaaat
gacaatgctccagttttcacccagtctttcataagcctttctgttccagagaataactct
cctggtgcacagttgacaaaagtcagtgcaacagatgcagacagtggacgtaatgctgaa
ataaactacctactaggttttgatgcacgacctgaatttgacctggatcgtcgtacaggc
atcctgactgcagtaaagaaattggatagagaaaaacaggaaaaatattactttacagtt
cttgcacaggacaatggaattccacccttaatgtccaatgccactgtctttgtgactgtt
cttgaccagaatgataacagcccacttttcactcacgatgagtacaatttctatgtccct
gagaaccttccaagacatggcacagtaggactaatcactgtgactgatcctgattatgga
gagaattctgcagttactctctccatcttagatgtgaataatcaattctctattgatcca
cagactggtgtcatccaaccaaatatttcatttgacagagaaaagcaagaatcctacact
ttctatgtaaaggctgaggatggtggtagggtatcacgttcttcaactgctaaagtaacc
ataaatgtggttgatgtgaatgataacaaacctatttttattgatcctccttccaattac
tcctatgaatgggttccaccatccacaaatcctggtacagtcatcttcaaggttgttgca
attgacaatgatactggcataaatgctgagcttcgttacagcattgttggaggaaacaca
aaaggactgtttatgattgaacaaatatcaggcaacatcacattgaaagataaatgtgtt
gtttcagatcttggtttacacagagtgatagtcaaagctaaggatttgggacaacctgat
tctctcttcaatattgtaaatgtcaatctgtttgtgaatgagtcagtgcccaatactaca
ttgatttatgaactggtacgcaaaagcatcgacacacctgtgactgaaagtactgaaaca
cctaatgcatcctctccaaaaactgactatgtgaagataatggttgccattgttgctggc
accataactgtcatcttagtgattttcatcactgctgtagtaagatgtcgccaatcccca
caccttaaagcttctcagaaaaacaaacaaaattctgagtgggttactccaaacccagaa
aacaggcaaatgattatcatgaagaagaagaagaaaaagaagaagcatccccctaagaac
ctgcttcttaattttgttactattgaagaagcaaagccagaaggtgcagacaatgataga
gccagtgtgacactagaccttcccattgaacttgaagagcaaaccatggaaaaatacaac
tggggcactacaccttctactttcaagcctgacagccctgatttggctagacactacaaa
tctgcctctcctcagcctgcattccagatccaacctgaaacgcccctgaactcaaagcac
cacatcatccaggaactgcctcttgataatactttcgtaggctgcgattccatctctaag
tgctcttccagcagttctgatccctacagtgtttctgagtgcagctattcagtgacaacc
ttcaaaacacctgtatcggtacatgctagaccgacaataaaggagatggtacgatctcgc
accccaatgaaagaggcaacaactgtggaaatctggactcatcctcatccacagaagaga
tctgaagggagaaaaacaggaaagtcccaacgacgggtcacatttcacctaccagaaggc
tctcaggaaagcatcagtgatggtggattgggagaccatgatgcaggcagccttcccagc
acatcccatgccctgcctctcggatatcctcaggaagagtactttgatcacggcgctcca
aacaaccgcactgaaggagatggtaactctgatcctgaatctactttcattcctggacta
aagaaagcttcagaaataacaatgcaaccaactgtggaagaagcctccgacaactgtact
caagaatgcctcattttgggccactctgattcctgctggatgccagctactctgacccaa
cccagccctccacagatacagacctctgctctctgccacagcccacctaggacccacaca
tctgttcgtcgctgcagccctccagtaacacagaccattgctatctgccacagcccccct
gtgacccaggcaattgcactgtgccatagtccttcaacagtacaggtggctcctctccac
cacagtactcctttagcacaggctactgcactccatcatagcccaacatcagcacaggcc
tctgcagtctgctacagcccacctctggcacaggctgtggtaattcaccacagtcctcct
ctgacacaggctgttatacttcatcgcaatcaggcccaaacaacaatgggtttgcagcaa
ggaaggctgcagggttctggagctgatggactgcatccccttgatcagggagcacaaggc
agtacaagagctcagttttaccccatgactgaaagactccattcagatgatgattcagtt
aaagtcattcccttgaccacctttacttcaggtaaacaggctagatcttcaaggagtgat
tctcccatcattgaagaacaccccttgtaa
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integrated database retrieval system
