KEGG   Microtus oregoni (creeping vole): 121440930
Entry
121440930         CDS       T08307                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03013  Nucleocytoplasmic transport
morg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121440930
  09122 Translation
   03013 Nucleocytoplasmic transport
    121440930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:morg03019]
    121440930
   03041 Spliceosome [BR:morg03041]
    121440930
Messenger RNA biogenesis [BR:morg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     121440930
Spliceosome [BR:morg03041]
 Complex C
  Other components
   EJC/TREX
    121440930
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121440930
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 HetE-N
Other DBs
NCBI-GeneID: 121440930
NCBI-ProteinID: XP_041497893
LinkDB
Position
Unknown
AA seq 1589 aa
MAMMTAATVVVPAEWIKNWEKSGRSEFLRLCRILSESKSRDTLACRDFQQALYELSYHVI
KGTLKPEQASSVLSDISEFREDIPLILADIFCILDIETNCLEEKNKRDHFTQLVLACLYL
VSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIV
ELGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHHDFFISLLEAYMN
MCEPQTLCHILGFKFKFYQEPNGETPSSLYTVAAVLLQFNLIDLDDLYVHLLPADSCIVN
EYKREIVEAKHIVRKLTMVVLPSDKSDEREKEKKKDDKVEKAPDNQKLGLLEALLVIGDW
QHAQSIMDRMPPYYAASHKVIALAICNLIHITIEPLYRRVGVPKGAKGSPVNALQNKKSP
KPAESFEDLRRDVFSMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGKQENKEKMEVI
FSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYHSHPLLV
KIKAHTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVLSQIQKYDNLITPVVD
SLKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAG
LLQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTMDQLEAMTGGEQLKAEGGYFGQI
RNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQ
FGGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKG
SKQQHKVHKYITSCEMVMAPVHEAVISLHISKVWEDISPQFYTTFWSLTMYDLAVPHTSY
EREVNKLKIQMKAIDDNQEMPLNKKKKEKERCTALQDKLLEEEKKQTEHVQRVLQRLKLE
KDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQKTPNFSTLLCYDR
VFSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNYPGFLTILRATGF
DGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLN
LGQALERRVHKICQEEKEKKPDLYVLAMVYSGQLKNRKSYMIPENEFHHKDPPPRNATSS
VPNGPCSGLPSSIGNTSKSDESSTEETDKSRERSQCGLKAVTKASSAVPKGNSNNGNSSS
NTKAVKENDKEKGKEKEKEKKEKTSAVIPEVRVLCKDNKEKPKEEQPNKDEKIRETKERM
PKSDKDKEKLKKEEKAKDEKFRITVPNIDSKSTQEREKEKEPSRERDLAKEMKSKENVKG
GEKTPVSGSLKSPVSRTDNAEPEREKRRKVDSHPSPSHSSTIKDSLNKLKESSAKLYINH
APPLLCKSKEREMDKKDLDKSRERSREREKKEEKDRKERKRDYSNNDREVPLDLVKRRKD
ENGILGTSKHKSESPCESLYPSEKDKEKNKSKSSGKEKGDFFKPEKVDKVSSGKKESGHD
KEKVEKKEKWDSCGDKDEKKHHKSSDKHR
NT seq 4770 nt   +upstreamnt  +downstreamnt
atggctatgatgactgcggcaactgtagtggttcccgctgagtggatcaagaactgggag
aaatctgggagaagcgaatttttgcgtttatgccggattctcagtgaaagtaaaagccgc
gacactttggcttgtagagatttccaacaagctctctatgagttgtcataccatgtcatt
aaaggaactttaaagccggaacaggcatccagtgttctcagtgacatcagtgaatttcgt
gaagatattccacttattcttgccgacatattctgcatattagatattgagacaaattgt
ttagaagaaaagaacaagagagatcattttacacagttggtattagcatgtttatattta
gtttcagacacagttctaaaggaacgcttggatccagaaacattggagtcattaggcctt
atcaaacaatcacagcagttcaatcagaagtcagttaaaatcaagacgaaactcttttac
aaacaacagaagttcaatttgttaagagaagaaaatgaaggttatgccaagcttattgtt
gaattggggcaagatttatctggaaatattacaagtgatttaatcttagaaattctcaaa
tctttaataggttgctttaatctagaccccaatcgagttttggatatcatattagaggtg
ttcgagtgtaggccagaacaccatgatttctttatatctttattagaagcttacatgaat
atgtgtgaaccacaaacattgtgtcatattcttggattcaaattcaagttttaccaggaa
ccaaatggtgagactccatcatctttgtatacagtcgcagcagtacttctacagtttaat
cttatcgatttggatgatctttatgtacaccttcttccagctgatagttgcattgtgaat
gaatacaaacgagaaattgtggaagctaagcacattgtcagaaaacttacaatggttgta
ttgccttctgacaaaagtgatgaacgagagaaagaaaagaaaaaagatgataaagtagag
aaggcacctgacaatcaaaaacttggtttgttggaagccttattagttattggtgattgg
cagcatgcacagagtattatggatcgaatgcctccgtactatgcagcatcacataaagta
atagcccttgctatctgcaatcttatacatataactattgaacctctttaccgaagagtt
ggtgttcctaaaggtgctaaaggctcacctgtcaatgctttgcaaaacaagaaatcacca
aagccagcagagagctttgaagacttaaggagagatgtattcagtatgttctgttatctt
ggtccccacctttctcatgatcccatcttatttgcaaaggttgtgcgcataggcaagtca
tttatgaaggaatttcagtctgatgggaagcaagaaaataaagagaaaatggaagtcatc
tttagttgcttgcttagcatcactgaccaggtcctacttccgtctctttctttgatggat
tgcaatgcgtgtatgtcagaggaactatggggaatgtttaaaacatttccttatcaacat
agataccgcttatatggccaatggaagaatgagacttaccatagtcacccacttttagta
aaaattaaagctcacacagtagacagagccaagtacattatgaagcgtctaaccaaggaa
aatgtgaaaccttcaggaagacagattgggaaactgagccacagcaatccaaccattttg
tttgattatgtcttgtcacaaatacagaaatacgataacttaataacacctgtggtagac
tcattgaaatatctcactgcgttgaattatgatgttttggcttattgtatcattgaagca
ttagctaatccagaaaaagaaagaatgaagcacgatgacacaaccatctcaagctggctt
cagagcctggctagtttctgtggtgcagtttttcgtaaatacccaattgatcttgctggt
cttcttcagtatgtagccaatcaattaaaggcaggcaaaagttttgacctgcttatattg
aaagaagtggtacaaaaaatggcaggaatagaagttacagaggaaatgacaatggaccag
ctagaggctatgactggtggggagcaactgaaagccgagggtggatattttggccagata
agaaacactaaaaaatcctctcagagattgaaggatgcactgctggaccatgaccttgcc
cttcctctctgtttgcttatggcccagcagaggaatggtgtgatctttcaggaaggcgga
gagaaacatttaaagcttgtagggaagctgtatgaccagtgtcatgatactttggtacag
tttggtgggtttttagcttcaaatttaagcacagatgattacataaagagagtaccttca
attgatgtactatgtaatgaatttcatacgccccatgatgcagcattttttctgtctcgg
ccgatgtatgcgcaccatatttcatccaagtatgatgaacttaagaaatcagaaaagggt
agtaaacagcaacataaagttcataaatacattacatcatgtgagatggtgatggctcct
gtccatgaagcagtgatctccttacacatttccaaagtctgggaagatatcagccctcaa
ttttataccacgttctggtctctgacaatgtatgaccttgcagttccacacactagctat
gaacgagaagtcaataaacttaagattcagatgaaagcaattgatgacaatcaagaaatg
cctctgaataaaaagaaaaaagagaaagagcgctgtactgcccttcaggacaagcttctt
gaagaagaaaagaaacagacggagcatgtgcagcgagtactacagagactgaaattggaa
aaggacaactggctcttagcaaaatctactaaaaatgagaccatcacaaagtttctccag
ctgtgtatatttcctcgttgtattttttcagcaattgattctgtttactgtgcgcatttt
gttgagttggtccaccaacagaagactccaaatttttccacacttctctgctatgatcga
gttttctctgatataatttacatggttgctagctttactgaaaatgaagctagtcggtat
ggtagatttctttgctgcatgttagagacggtgactagatggcatagcgacagatccacc
tatgagaaggaatgtggaaactatccaggattccttactatattacgagcaactggattt
gatggtggaaataaagcggatcagttagattatgaaaattttcgacatgttgtccataag
tggcattataaactaaccaaggcatcggtacattgccttgaaacaggtgaatatactcat
atcagaaatatcttgattgtgctcacaaaaatactgccatggtaccccaaagttttaaat
ctgggacaggctttggaaagaagagtacataaaatctgccaagaagagaaagaaaagaag
ccagatctgtatgtactagcaatggtctactctgggcagctgaaaaatagaaagtcgtac
atgatacctgaaaatgaatttcatcacaaagatcctcctccaagaaatgctacttcaagt
gtaccaaatggaccttgtagcgggctgccatcttccataggaaacacgtctaagtcagat
gaaagcagtactgaggagactgacaagtcaagggaaaggtctcagtgtggcctgaaagct
gtcactaaagcctctagtgccgtaccaaaagggaattcaaacaatggaaacagcagctcc
aacaccaaggctgttaaggaaaatgacaaagaaaaggggaaagagaaggaaaaagaaaaa
aaagaaaagacctcagctgttattccagaagttagggtactttgtaaagacaataaagaa
aaacccaaggaagagcagccaaataaagatgagaaaataagagagaccaaggaaagaatg
cctaaatctgacaaagataaggaaaaattaaagaaggaggaaaaagctaaagatgagaag
ttcaggatcactgtccctaacatagattcaaagtctactcaagaaagagaaaaagagaaa
gagccatcaagagaaagagatttagcaaaggaaatgaaatcaaaagaaaatgttaaagga
ggagaaaaaacaccagtttctgggtccttgaaatcacctgtttcccgaacagataatgca
gagcccgaaagagaaaagcgtcgcaaggtagattcccatccttctccatcccattcttcc
acaataaaggacagtctcaacaaactcaaggagtcttcagcaaagctctacatcaaccat
gctcctccactgttgtgcaagagtaaggagagagaaatggacaagaaagatttggacaag
tcgagggaaagatccagagagagagagaaaaaagaagaaaaggaccggaaagagcggaaa
agggattattcaaacaatgaccgggaagtgcctctagacttagtcaaaaggcggaaagat
gaaaatggaatattggggacttcaaagcacaaaagtgaaagcccctgtgaatctctttat
ccaagtgagaaagacaaggaaaaaaataagtcaaaatcctcaggcaaagaaaaaggtgat
ttctttaaacctgaaaaggtggataaagtatccagtgggaaaaaggagtctggacatgat
aaagaaaaggtagaaaagaaagagaaatgggacagttgtggagataaggacgagaagaag
catcataagtcctcagacaagcacagataa

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