Microtus oregoni (creeping vole): 121440930
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Entry
121440930 CDS
T08307
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03013
Nucleocytoplasmic transport
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121440930
09122 Translation
03013 Nucleocytoplasmic transport
121440930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121440930
03041 Spliceosome [BR:
morg03041
]
121440930
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121440930
Spliceosome [BR:
morg03041
]
Complex C
Other components
EJC/TREX
121440930
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121440930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
HetE-N
Motif
Other DBs
NCBI-GeneID:
121440930
NCBI-ProteinID:
XP_041497893
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MAMMTAATVVVPAEWIKNWEKSGRSEFLRLCRILSESKSRDTLACRDFQQALYELSYHVI
KGTLKPEQASSVLSDISEFREDIPLILADIFCILDIETNCLEEKNKRDHFTQLVLACLYL
VSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIV
ELGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHHDFFISLLEAYMN
MCEPQTLCHILGFKFKFYQEPNGETPSSLYTVAAVLLQFNLIDLDDLYVHLLPADSCIVN
EYKREIVEAKHIVRKLTMVVLPSDKSDEREKEKKKDDKVEKAPDNQKLGLLEALLVIGDW
QHAQSIMDRMPPYYAASHKVIALAICNLIHITIEPLYRRVGVPKGAKGSPVNALQNKKSP
KPAESFEDLRRDVFSMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGKQENKEKMEVI
FSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYHSHPLLV
KIKAHTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVLSQIQKYDNLITPVVD
SLKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAG
LLQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTMDQLEAMTGGEQLKAEGGYFGQI
RNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQ
FGGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKG
SKQQHKVHKYITSCEMVMAPVHEAVISLHISKVWEDISPQFYTTFWSLTMYDLAVPHTSY
EREVNKLKIQMKAIDDNQEMPLNKKKKEKERCTALQDKLLEEEKKQTEHVQRVLQRLKLE
KDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQKTPNFSTLLCYDR
VFSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNYPGFLTILRATGF
DGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLN
LGQALERRVHKICQEEKEKKPDLYVLAMVYSGQLKNRKSYMIPENEFHHKDPPPRNATSS
VPNGPCSGLPSSIGNTSKSDESSTEETDKSRERSQCGLKAVTKASSAVPKGNSNNGNSSS
NTKAVKENDKEKGKEKEKEKKEKTSAVIPEVRVLCKDNKEKPKEEQPNKDEKIRETKERM
PKSDKDKEKLKKEEKAKDEKFRITVPNIDSKSTQEREKEKEPSRERDLAKEMKSKENVKG
GEKTPVSGSLKSPVSRTDNAEPEREKRRKVDSHPSPSHSSTIKDSLNKLKESSAKLYINH
APPLLCKSKEREMDKKDLDKSRERSREREKKEEKDRKERKRDYSNNDREVPLDLVKRRKD
ENGILGTSKHKSESPCESLYPSEKDKEKNKSKSSGKEKGDFFKPEKVDKVSSGKKESGHD
KEKVEKKEKWDSCGDKDEKKHHKSSDKHR
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatgactgcggcaactgtagtggttcccgctgagtggatcaagaactgggag
aaatctgggagaagcgaatttttgcgtttatgccggattctcagtgaaagtaaaagccgc
gacactttggcttgtagagatttccaacaagctctctatgagttgtcataccatgtcatt
aaaggaactttaaagccggaacaggcatccagtgttctcagtgacatcagtgaatttcgt
gaagatattccacttattcttgccgacatattctgcatattagatattgagacaaattgt
ttagaagaaaagaacaagagagatcattttacacagttggtattagcatgtttatattta
gtttcagacacagttctaaaggaacgcttggatccagaaacattggagtcattaggcctt
atcaaacaatcacagcagttcaatcagaagtcagttaaaatcaagacgaaactcttttac
aaacaacagaagttcaatttgttaagagaagaaaatgaaggttatgccaagcttattgtt
gaattggggcaagatttatctggaaatattacaagtgatttaatcttagaaattctcaaa
tctttaataggttgctttaatctagaccccaatcgagttttggatatcatattagaggtg
ttcgagtgtaggccagaacaccatgatttctttatatctttattagaagcttacatgaat
atgtgtgaaccacaaacattgtgtcatattcttggattcaaattcaagttttaccaggaa
ccaaatggtgagactccatcatctttgtatacagtcgcagcagtacttctacagtttaat
cttatcgatttggatgatctttatgtacaccttcttccagctgatagttgcattgtgaat
gaatacaaacgagaaattgtggaagctaagcacattgtcagaaaacttacaatggttgta
ttgccttctgacaaaagtgatgaacgagagaaagaaaagaaaaaagatgataaagtagag
aaggcacctgacaatcaaaaacttggtttgttggaagccttattagttattggtgattgg
cagcatgcacagagtattatggatcgaatgcctccgtactatgcagcatcacataaagta
atagcccttgctatctgcaatcttatacatataactattgaacctctttaccgaagagtt
ggtgttcctaaaggtgctaaaggctcacctgtcaatgctttgcaaaacaagaaatcacca
aagccagcagagagctttgaagacttaaggagagatgtattcagtatgttctgttatctt
ggtccccacctttctcatgatcccatcttatttgcaaaggttgtgcgcataggcaagtca
tttatgaaggaatttcagtctgatgggaagcaagaaaataaagagaaaatggaagtcatc
tttagttgcttgcttagcatcactgaccaggtcctacttccgtctctttctttgatggat
tgcaatgcgtgtatgtcagaggaactatggggaatgtttaaaacatttccttatcaacat
agataccgcttatatggccaatggaagaatgagacttaccatagtcacccacttttagta
aaaattaaagctcacacagtagacagagccaagtacattatgaagcgtctaaccaaggaa
aatgtgaaaccttcaggaagacagattgggaaactgagccacagcaatccaaccattttg
tttgattatgtcttgtcacaaatacagaaatacgataacttaataacacctgtggtagac
tcattgaaatatctcactgcgttgaattatgatgttttggcttattgtatcattgaagca
ttagctaatccagaaaaagaaagaatgaagcacgatgacacaaccatctcaagctggctt
cagagcctggctagtttctgtggtgcagtttttcgtaaatacccaattgatcttgctggt
cttcttcagtatgtagccaatcaattaaaggcaggcaaaagttttgacctgcttatattg
aaagaagtggtacaaaaaatggcaggaatagaagttacagaggaaatgacaatggaccag
ctagaggctatgactggtggggagcaactgaaagccgagggtggatattttggccagata
agaaacactaaaaaatcctctcagagattgaaggatgcactgctggaccatgaccttgcc
cttcctctctgtttgcttatggcccagcagaggaatggtgtgatctttcaggaaggcgga
gagaaacatttaaagcttgtagggaagctgtatgaccagtgtcatgatactttggtacag
tttggtgggtttttagcttcaaatttaagcacagatgattacataaagagagtaccttca
attgatgtactatgtaatgaatttcatacgccccatgatgcagcattttttctgtctcgg
ccgatgtatgcgcaccatatttcatccaagtatgatgaacttaagaaatcagaaaagggt
agtaaacagcaacataaagttcataaatacattacatcatgtgagatggtgatggctcct
gtccatgaagcagtgatctccttacacatttccaaagtctgggaagatatcagccctcaa
ttttataccacgttctggtctctgacaatgtatgaccttgcagttccacacactagctat
gaacgagaagtcaataaacttaagattcagatgaaagcaattgatgacaatcaagaaatg
cctctgaataaaaagaaaaaagagaaagagcgctgtactgcccttcaggacaagcttctt
gaagaagaaaagaaacagacggagcatgtgcagcgagtactacagagactgaaattggaa
aaggacaactggctcttagcaaaatctactaaaaatgagaccatcacaaagtttctccag
ctgtgtatatttcctcgttgtattttttcagcaattgattctgtttactgtgcgcatttt
gttgagttggtccaccaacagaagactccaaatttttccacacttctctgctatgatcga
gttttctctgatataatttacatggttgctagctttactgaaaatgaagctagtcggtat
ggtagatttctttgctgcatgttagagacggtgactagatggcatagcgacagatccacc
tatgagaaggaatgtggaaactatccaggattccttactatattacgagcaactggattt
gatggtggaaataaagcggatcagttagattatgaaaattttcgacatgttgtccataag
tggcattataaactaaccaaggcatcggtacattgccttgaaacaggtgaatatactcat
atcagaaatatcttgattgtgctcacaaaaatactgccatggtaccccaaagttttaaat
ctgggacaggctttggaaagaagagtacataaaatctgccaagaagagaaagaaaagaag
ccagatctgtatgtactagcaatggtctactctgggcagctgaaaaatagaaagtcgtac
atgatacctgaaaatgaatttcatcacaaagatcctcctccaagaaatgctacttcaagt
gtaccaaatggaccttgtagcgggctgccatcttccataggaaacacgtctaagtcagat
gaaagcagtactgaggagactgacaagtcaagggaaaggtctcagtgtggcctgaaagct
gtcactaaagcctctagtgccgtaccaaaagggaattcaaacaatggaaacagcagctcc
aacaccaaggctgttaaggaaaatgacaaagaaaaggggaaagagaaggaaaaagaaaaa
aaagaaaagacctcagctgttattccagaagttagggtactttgtaaagacaataaagaa
aaacccaaggaagagcagccaaataaagatgagaaaataagagagaccaaggaaagaatg
cctaaatctgacaaagataaggaaaaattaaagaaggaggaaaaagctaaagatgagaag
ttcaggatcactgtccctaacatagattcaaagtctactcaagaaagagaaaaagagaaa
gagccatcaagagaaagagatttagcaaaggaaatgaaatcaaaagaaaatgttaaagga
ggagaaaaaacaccagtttctgggtccttgaaatcacctgtttcccgaacagataatgca
gagcccgaaagagaaaagcgtcgcaaggtagattcccatccttctccatcccattcttcc
acaataaaggacagtctcaacaaactcaaggagtcttcagcaaagctctacatcaaccat
gctcctccactgttgtgcaagagtaaggagagagaaatggacaagaaagatttggacaag
tcgagggaaagatccagagagagagagaaaaaagaagaaaaggaccggaaagagcggaaa
agggattattcaaacaatgaccgggaagtgcctctagacttagtcaaaaggcggaaagat
gaaaatggaatattggggacttcaaagcacaaaagtgaaagcccctgtgaatctctttat
ccaagtgagaaagacaaggaaaaaaataagtcaaaatcctcaggcaaagaaaaaggtgat
ttctttaaacctgaaaaggtggataaagtatccagtgggaaaaaggagtctggacatgat
aaagaaaaggtagaaaagaaagagaaatgggacagttgtggagataaggacgagaagaag
catcataagtcctcagacaagcacagataa
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integrated database retrieval system