KEGG   Microtus oregoni (creeping vole): 121441664
Entry
121441664         CDS       T08307                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03030  DNA replication
morg03410  Base excision repair
morg03420  Nucleotide excision repair
morg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121441664
   03410 Base excision repair
    121441664
   03420 Nucleotide excision repair
    121441664
   03430 Mismatch repair
    121441664
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:morg03032]
    121441664
   03400 DNA repair and recombination proteins [BR:morg03400]
    121441664
Enzymes [BR:morg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     121441664
    6.5.1.6  DNA ligase (ATP or NAD+)
     121441664
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     121441664
DNA replication proteins [BR:morg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    121441664
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     121441664
DNA repair and recombination proteins [BR:morg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     121441664
   NER (nucleotide excision repair)
    Other NER factors
     121441664
   MMR (mismatch excision repair)
    Other MMR factors
     121441664
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PucR
Other DBs
NCBI-GeneID: 121441664
NCBI-ProteinID: XP_041498801
LinkDB
Position
Unknown
AA seq 920 aa
MRKKQQRSIMSFVQPTKEGKAKKPEKETANSIGEKESPPKVALKERNRLVSESDSPVKRP
GRKAAQVLSSEGEEEDEAPGTPKVQKSVSDSKQNSPSSPDTCPENSRFFNSPFMDISPSG
FPKRRTARKQLPKGTIQNSVEEQNEDKGRAAKKRKKEEEAQTPTESLTEAEDVKQKEEKE
GSQSIVPPEPAKSPESVTLSKTENIPVCKAGVKQDPQEEEQSKPPARSAKTLSSFFAPRK
PAVKAEVKQEEAGTPRKEETKGTLDPTNYNPSKSNYHPIEDACWKHGQKVPFLAVARTFE
KIEEVSARLKMVETLSNLLXVALSPPDLLPVLYLSLSRLGPPQQGLELGVGDGVLLKVVA
QATGRQLKSIRAEVAEKGDVGLVAENSHSTQRLMLPPPPLTTSWVFTKFCDIARLTGSAS
MAKKVDIIKGLFVACRHSEARFIARSLSGRLCLGLAEQLVLAALAQAVSLTPPGQEFPPA
VVDAGKGKTADARKMWLEEXGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCRLSPGIP
FKSMLAHPTRDVSEVLKHFEEVDFTCEYKYDEQWAQIHVLEGGDVKIFSRNQEDNTGKYP
DIISRIPKIKLPSVTSFILDTEAVGRDREKKQIQPFQVLTTRKRKKVDASEIQVQVCLYV
FDLIFLNGESLTRQPLSRRRQLLWENFVETEGEFVFATSLDTKDIEQISEFLEQSVKDSC
EGLMVKTLDVDATYEIAKRSRNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFM
LAAYDEESEELQAICKLGTGFSDEELEEHHQSLKALVLPTPPPYVRIDGAVAPDHWLDPS
VLWEVKCADLSLSPIYPAAWSLVDKEKGISLRFPPFIRVRGDKQPEQATTSDQVACLYRK
QSQIQNQQSSDVDSDFEDCY
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgagaaagaaacagcagagaagtattatgtcatttgtccaacccaccaaagagggtaaa
gcaaagaagcctgaaaaggagacagccaacagcatcggagagaaggagtcccctccaaag
gtagcattgaaagagaggaatcgactggtgtctgagagtgactctccagtgaagaggcca
ggaaggaaggcagcccaggtcctaagcagtgaaggggaggaggaagatgaggctcctggc
acccccaaagttcagaagtctgtatcagactccaaacagaactctccttccagccctgac
acatgtcctgagaatagtcgtttcttcaacagccccttcatggatatctccccatcagga
ttcccgaagcgtcgcactgctcggaagcagctcccgaaagggacaattcagaactctgtg
gaggagcagaatgaggacaaaggtagagcagccaagaaaaggaagaaggaagaagaagca
cagacgccaacagaaagtctcacagaggctgaagatgtaaaacagaaggaagaaaaggag
gggagccagtccatagtgccccctgagcctgcaaagtcccctgagtcagtaaccctgtca
aagacagagaacattccagtgtgtaaggctggcgtgaaacaggatcctcaggaagaggag
cagagcaaacctcctgctagaagtgccaagacactcagcagcttctttgctcctcggaag
ccagcagtgaaagctgaagtgaaacaagaagaggcaggtactccaaggaaggaagagacc
aagggaaccctggatccaacaaattacaatccttccaagagtaactaccatcccattgaa
gatgcctgctggaaacacggccagaaggttccttttcttgctgtggcccggacatttgag
aagatagaggaggtttctgctcgcctcaagatggtggagacactgagcaacctgctanca
gtggccctgtcacccccagacctgctccctgtcctttacctcagcctcagccgccttggg
ccacctcagcagggactagagctgggcgttggtgatggtgtcctcctcaaggtagttgcc
caggccacaggtcgtcagctgaagtccatccgggctgaggtagctgagaagggtgatgtg
ggactggtggccgaaaacagccacagcactcagagactcatgctgcccccacctccactc
accacctcctgggtctttaccaaattctgtgacattgcccggctcactggcagtgcttcc
atggctaagaaggtggacatcatcaagggcctttttgtcgcctgccgccactcagaagcc
cgattcattgccaggtccttaagtggacggctgtgccttgggctggctgagcagttggtc
ttggctgcacttgcccaggctgtgagcctcacaccccctggccaagaatttccccctgct
gttgtggatgctgggaagggcaagacagcagacgccagaaagatgtggttggaagaataa
ggcatgatcttgaagcagaccttctgtgaggtgcctgacctggatcgaatcatccctgtg
ctgttggaacatgggctggaacgtctcccagagcactgcaggctgagccctgggatccct
tttaaatcaatgctggcccatcccactcgggatgtcagcgaggtactgaagcactttgag
gaggtggacttcacctgcgagtataaatacgatgagcagtgggcacagattcatgttctg
gaaggtggagacgtgaagatcttcagcaggaaccaggaagacaacacaggaaagtaccct
gacatcatcagccgcatccccaagattaaactcccctctgtcacttctttcatcctggac
actgaggctgtgggccgggatcgggaaaagaagcagatccagccattccaagtgctcacc
actcgaaagcgcaagaaggtagatgcatcagagatacaggtgcaggtgtgtctgtatgtc
tttgatctcatcttcctcaacggagagtccctgactcgccagcccttgtctcgacgccgg
caactgctctgggagaactttgtggagacggagggcgagtttgtctttgccacctccctg
gacaccaaagatatcgagcagatctctgagttcttggagcagtcggtgaaggactcctgt
gaggggctgatggtgaagaccctggatgttgatgccacctatgagatcgccaagaggtca
cgcaattggctcaagctgaagaaggactaccttgacggtgtgggtgacactctggatctt
gtggtgattggtgcctatctgggtcgggggaagcgtgctggccggtatgggggcttcatg
ttggctgcctatgatgaagagagtgaagagctgcaggccatatgcaagctgggaactgga
ttcagtgatgaagagctggaggagcatcaccagagcctgaaggccctggtattgccaacc
ccacccccctatgtgagaattgatggggcagtggctccagaccactggctggaccccagt
gtcctgtgggaggtgaagtgtgcagatctctctctgtcccccatctaccctgctgcatgg
agcctggtggacaaagaaaaaggtatctcccttcgtttccctccgttcattcgtgtccgt
ggagacaagcagccagagcaagccactaccagtgaccaggtggcctgtttataccggaag
cagagtcagattcagaaccagcaaagctcagacgtggactccgactttgaggactgctat
taa

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