Microtus oregoni (creeping vole): 121442190
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Entry
121442190 CDS
T08307
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
morg03400
]
121442190
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121442190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
121442190
NCBI-ProteinID:
XP_041499568
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAVDVPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICSVAEVVVTTRTAADDFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTTKKCKDELKHVQDLLISYA
VLIPDLRIIFIHNKAVIWHKSRVPDHRTALMSVLGTAVMANFDAVQHHCEESQIYLSGFF
PKLDADHISTSLSSPERSFIFINSRPVHQKEILKLIRRYYNLKCLKESTRSYPIFFLKID
VPSAELDVNLTPDKSQVLLQNKEAVLNALENLMVTCYGPLPSTESCGNNKVAVSTANMAA
RETAETDVPVNKMESPGNNYPNADTSAVHFQNDESRKNTANYLNQQINVNDPCDGHVSSE
QPRVNKDTGSPFQSVSVDRSSSEAVQSKYSKANSSGSGEHIQGENGRNGTEERGGGGGEA
FLEESLAVCADDWSKGNVLNAVGENIEPVRILVPQKSLVCKVSDDSYPAPEPKNLSDGPC
SKTSNVIDNRSGQLTAYDLISNRAVKKPMAARALFIQDRRAQFLAENPKTSLEDAEAQIE
ALWESLSEEEKLRYEEKAKKDLERYNNQMRRAIEQEPQAPLKDGRKKLRAASAWGLAQKH
KLKASLSNQPKLDELFQSQNEKRKSENIKIAEVPFSMESLKENFKKQKKVDLEEKDEICL
IHGLKFPDAWLVTSRRDVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGS
HYLEVLHKMSTVDQRCGGSTYLSDPRLTANGFKIRLIPGVSSTEDYLEIEGMAKCLPFYG
VMDLKEILNAIIDKNAKEPYECRPRKVTSYLEGEAVRLSRQLPMYLPREDIQDLIYRMTR
QFGSETKECVHGRPFFHHLTHLPESS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttgcctgccgcgacagttcgcctcctgtccagttcccagataatcacgtca
gtggtcagcgttgtgaaagaactcatcgaaaactcattggatgctggagccaccagcatc
gacgtgaaactggagaactacggatttgataaaatcgaggtccgggacaatggcgagggc
atcaaggctgtggatgtccctgtgatggctgtgaagtactacacctccaagataaacagt
cacgaagacctcgagaacctgacaacctacggtttccgcggtgaagccttggggtcgatt
tgtagtgttgcggaggtggtcgtcacaacaaggacagctgctgatgactttagtacccaa
tatgttttagatggcagtggccacatactttctcagaaaccctcacatcttggtcaaggt
actacggtaactgccctgaagctgttcaagaacctgcctgtaaggaagcagttctactca
accactaaaaagtgtaaagacgaactcaaacatgtgcaggatctcctcataagctacgct
gtccttatccctgacctcaggattatttttatacataataaggcagttatttggcacaag
agtagagtaccagatcacaggacggctctcatgtcggttctggggactgctgtgatggcc
aactttgacgctgttcagcaccactgtgaagaatctcagatttacctaagtggattcttc
ccaaaacttgatgcagaccacatttccacaagtctttcaagcccagagagaagttttatc
ttcattaacagtcgaccagtacatcagaaagagatactgaagctaatccggcgttattat
aatctgaagtgcctgaaggagtctactcggtcgtatcccattttctttctgaaaattgat
gttccttcagctgaactggatgtaaatctcacaccagataaaagtcaagtattattacag
aataaggaagctgttttaaatgctcttgaaaatctgatggtgacctgttatggaccacta
cccagtacagagtcttgtggaaataacaaagtagctgtttccacagccaacatggctgct
cgtgagacagcagaaacagatgtgcccgtgaataaaatggagtcacctggaaataattac
ccaaatgctgacacttcggctgtccacttccaaaatgatgaatctagaaaaaacactgct
aattatttaaatcagcagataaatgtaaacgacccctgtgatggccatgttagtagtgaa
cagcctcgcgttaataaggacactggaagtccttttcaaagtgtctccgtggataggtcc
tcctcagaggctgtccagagtaaatacagcaaggctaactcctctggttccggcgaacat
atccaaggagaaaatggcaggaacgggacagaagaacgtggcggaggtgggggagaagcg
tttctcgaagaatctctggcagtctgtgctgatgactggagcaagggaaatgtgttgaat
gcggtgggagagaatattgaacctgtgagaattctagtgccacagaaaagtctagtgtgt
aaagtgagcgatgatagttacccagcccctgaaccgaagaatctcagtgatggcccttgt
agcaagacatccaatgtaatagataacagatccggacagcttacagcctatgacttaatc
agcaaccgagcagtcaagaagcccatggcagcaagggccctgtttattcaagatcgtcgc
gctcagttcctcgcagaaaatcccaagacttctttggaggatgcagaggcacaaattgaa
gcactgtgggagtctctgagtgaagaggaaaaactgaggtatgaagaaaaggctaaaaaa
gacttggaacgatacaataatcaaatgcggagagctattgaacaggagccacaagcaccc
ttaaaagatggcagaaaaaagctaagggccgccagtgcatggggcttggcccagaagcac
aagctgaaagcctcgctatctaatcagccgaaactcgatgagctctttcagtcccagaat
gagaaaaggaagagtgaaaacattaaaatagccgaggtccccttttctatggagagccta
aaagagaactttaagaaacaaaagaaagttgacttagaagagaaggatgagatctgcctg
atccacggtctcaagttccccgatgcttggctggtcacgtcccgaagagatgtcatgtta
ctgaacccatacagagtggaggaagccctgctgtttaaaagacttcttgagaatcataaa
ctccccgcagagccactggaaaaaccaattatattaacagagagtctttttaatgggtct
cattatttagaggttttacataaaatgtcgacagttgaccagagatgcggcggatcaact
tacctgagtgaccctcgtctgacagcaaatggcttcaagatcaggctgataccaggagtt
tccagtactgaagactacttggaaatagaaggcatggctaagtgtctcccgttctacgga
gtaatggatttaaaggaaattcttaatgccataatagacaagaacgcaaaggagccttac
gagtgcagaccccggaaagtgacgagttatctggagggggaagcagtccgtctctcaaga
cagctccccatgtacttaccaagagaagacatccaagatcttatctataggatgacgcgc
cagtttggaagtgaaaccaaagagtgtgttcatggccgcccattttttcaccatttaacc
caccttccagaaagttcatga
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