Microtus oregoni (creeping vole): 121442467
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Entry
121442467 CDS
T08307
Symbol
Casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03013
Nucleocytoplasmic transport
morg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121442467 (Casc3)
03015 mRNA surveillance pathway
121442467 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121442467 (Casc3)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121442467 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121442467
NCBI-ProteinID:
XP_041499984
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSAGGGGSGSLPSQRGGRGGGLHL
RRVESGGAKSAEQSECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEANE
ADSSAKEKGEEKPDNKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRVRKPRFGSPPQRDPNWIGDRSNKSHRHQGPGGALPPRTFINRNAAG
TGRMSASRNYSRSGGFKEGRTSFRPVEVGGQHGGRSGETHKHEANYRSRRLEQTPMRDPS
PEPDAPLLGSPEKEETASETPAAVPDTVPPAPDRPIEKKSYSRARRTRTKVGDAVKASEE
VPPPSEGLTSATTIPETTPPPAAKTGNWETPVDSTTGGLEQDVAQLNIAEQNWSPGQPSF
LQPRELRGMPNHIHMGAGPPPPFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIM
EGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPPP
VSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPPPHLYPNTQAPSQVY
GGVTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgtcggcagcgcgcttcccaggacaccgaggacgaagagtctggtgct
tcgggttccgacagcggctctccggcgcggggcggcggcagctgcagcgggagcgccgga
ggcggcggtagtggctcgctgccttctcagcgcggcggccgcggcgggggcctgcatctg
cggcgggtggagagcgggggcgccaagagcgcagagcagtcggagtgtgagagtgaagat
ggcatggaaggcgatgctgtcctttccgattatgaaagtgcagaagattcagaaggtgaa
gaaggagaatacagtgaagaggagaactccaaggtggagctgaaatcagaagcaaatgaa
gctgattcctcagcaaaagagaagggagaagaaaagcctgataataaaggcactgtgact
ggagagaggcaaagtggggatggacaggagagcacagagcctgtagagaacaaagtgggt
aaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcctatataccc
aggaaagggctcttctttgagcatgatcttcgaggacagactcaggaagaagaagtccga
cccaagggacgtcagcgaaagctatggaaggatgagggccgctgggagcatgataagttc
cgtgaagatgaacaggccccaaagtcccgacaggagctcattgctctttatggctatgat
attcgatccgctcacaatcctgatgacatcaaaccccgaagagtccgaaaacctcgattt
ggaagtcccccacaaagagatccaaactggattggtgatcgatcaaacaagtcccatcgc
caccagggtcctgggggcgccctaccaccaagaacatttattaacaggaatgcagcaggt
actggccgcatgtctgcatccaggaattattcccgatctgggggcttcaaggaaggtcgt
actagttttaggcctgtggaggttggtgggcagcatggtggccggtctggtgagactcat
aagcatgaagctaattaccggtcgcggcgtctggagcagactcctatgagggatccatct
ccagaaccagatgctccattgcttggcagtcctgagaaagaagagacggcctcggagaca
ccagctgctgttcctgacactgtaccaccagctcctgacaggcccattgagaagaaatcc
tattcccgggcaagaaggacccggaccaaagttggggatgcagtcaaagcttctgaggag
gttcctcctccatctgaagggctcacttcagcaaccacaatcccagaaacaactcctcct
ccagctgctaagactgggaactgggagactccggtagattctaccacaggtggactggag
caagacgtggcacagctaaatatagcagaacaaaactggagtccaggacagccttcattc
ctgcaaccacgggagcttcgaggtatgcccaaccacatccatatgggagcaggacctcca
cctccatttaaccggatggaagaaatgggtgtccagggtggtcgagctaaacgttattca
tcccagcggcagagacctgtgccagagccccctgctcctcctgtgcatatcagcatcatg
gagggccattactatgatccattgcagttccagggaccaatttatacccatggtgacagc
cctgccccactgcctccacagggcatgattgtacagccagaaatgcaccttcctcaccca
ggtttacatccccatcagtcaccagcacctctgcccaatccgggtctttacccgccacca
gtgtccatgtctccaggacaacctccaccccagcagttgcttgctcctacttacttctct
gctccaggtgtcatgaattttggtaaccccagttacccttatgctccaggagcattacct
cctcctcctcctcctcctcctcatctgtatcctaacacacaggctccatcacaggtatat
ggaggagtgacttactataaccctgcccagcagcaggtgcagcccaaaccctccccaccc
cggaggactccccagccagtctccatcaagccccctccacctgaggttgtaagcaggggt
tccagttaa
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