Microtus oregoni (creeping vole): 121442929
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Entry
121442929 CDS
T08307
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
morg04515
]
121442929
Cell adhesion molecules [BR:
morg04515
]
Cadherins
Protocadherins
121442929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ly49
Motif
Other DBs
NCBI-GeneID:
121442929
NCBI-ProteinID:
XP_041500494
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAAARRKTLQIRQVGSLLLLWCVSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ERGARLVAEGNKLHFRLHRKTGDLFVKEKLDREALCGKADPCVLHFEIVLAEPLQSFRVE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANPYFHL
HTRFRSHGPKYAELVLDNPLDREEQPEVNLTITAVDGGSPPKSGTANIRVLVLDVNDHVP
QFSRLVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLQTFLVDSQTGE
VRLRGPLDFETMETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFTIRDRDVRVGGKITCFLREDLPFVVKHTFRNSYSLVTHRSLDREDVSSYNI
TLVAMDTGPPNLSTETVIEVLISDINDNPPIFQEDSYILTVRENNSPAVFIGKVHADDLD
VGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGSLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDLGLFSVQRQNGEIRTLRQISERDPMIQKLIILVQDHGQPALSTTASLN
ILLVDGFSEPYLQFQDPSKHSRKVNPTTKYLVISLAVLSFLFLVSVTVIFVIHLYQKIKH
RDKLTIQEHFYDDCNFPNNLVQGRGNGSLPQPCPYDMCSATGTGNSEFRFLKRFMPNFPF
PHATGEVKTEDDPSLPPNSNRNRPRGSEGHARIDDDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcgcgcagaaaaactttgcagatcaggcaggtgggatctcttctccttctc
tggtgtgtgtctgtgggaggcgcggccactatccgctattcggtggcggaggagatggag
agcggctcctttgtggctaacgtggctaaggacctggggctagaggtggggaagctggca
gagcgcggggctcggctggttgccgagggcaacaagttgcacttccggctccaccgcaag
acaggagatttgttcgtcaaggagaaactggatcgcgaggcactctgtggcaaagctgac
ccttgtgtgctgcactttgaaattgttctggcagagccgctgcagtccttccgtgtggaa
gtcagagtatttgacatcaacgacaatgccccagtttttctaaacaaggagcctctttta
aagattcctgagagcacccctttgggctcacgcttcccactgcagagcgcccaggacctg
gatgtgggactcaatggtctccaaaactacaccctgagtgcaaacccctatttccacttg
cacacgcgcttcagaagccatgggcccaaatatgcggagcttgtgctggataatcccctg
gatagagaggagcagcctgaagtcaacttgaccattacagcggtggatggtgggtcccct
cccaagtctggcaccgccaacattcgagtgcttgttctggacgtcaatgaccacgtgccc
cagttctctcgcttggtatatcgcgctcaggtgccagagaacagcgacaacggctcttta
gtagtggtggtgactgccacggacctggacgagggcaccaacaagcagatcacttactct
ttagctgaaaatccagaagcagttctccagacgtttcttgttgactctcaaaccggagaa
gttcgactccgcgggcccctagattttgaaacgatggaaacatatgacattgacattcaa
gcgacagatggagggggcctttccgcccacagcaaagtcttggtggaagtggtggatgta
aatgacaatcctccggaagtgacagtctcctcagtgtccagccctcttcctgaggactct
ccgctccagaccgtagtggccctcttcactatccgggaccgggatgtgcgagttggagga
aaaatcacctgcttcctcagagaagacttgccctttgtagtcaagcacacattccggaat
tcttactcgctggtcactcatagaagcttggatagggaggatgtctccagttataacatc
acactcgttgccatggatactggaccacccaacctgtccacagagactgtgattgaagtg
ctaatatctgacataaatgataatcctccaatctttcaggaggattcctacatcttgact
gtccgtgaaaacaacagtcctgcagtttttattggcaaagtccacgctgatgatctagat
gtgggtgaaaacgcccaagtgacatattctctcctgcctccaaagagtggagacctctca
gtctttgcctacatctctataaattcagacaatggaaagctctatgcactaagaaccatg
gattatgaggccattcaagattttcagtttgtggtaaaggcaaccgatgggggttttctg
tcactgagtagccaagttactgtcagagtggttgtcttggatgacaacgacaatcgtcca
atgatcttgtacccattacagaatggcagcttgccctgcaacgacctggtgcccaggtct
gcagaggcaggttacctggtgactaaagtggtggctgttgatggtgactctgggcagaac
tcttggctttcataccatctccttaaagccaccgaccttgggttattttctgttcaaaga
caaaacggggaaatacgtacactgaggcagatatccgagagagatcctatgattcagaaa
ctgatcattctcgttcaggatcatggccagccagctctctccactacggcctcactcaac
atcctgctggtagacggcttttcagagccttacttgcagttccaggatccatccaagcat
tccagaaaggtaaatccaaccacaaaatatttggtcatttctctggctgtgctttctttt
ctttttctcgtctctgtcactgtgatcttcgttatacacctctaccagaagattaaacac
agagacaaactcacaattcaagagcacttctatgatgactgtaatttccctaacaatttg
gtacaagggagaggcaatggttccttgccccagccttgtccttatgatatgtgctcagcc
actgggactggaaatagtgagttccgttttcttaagcgatttatgcccaatttccctttc
ccccatgccactggagaggtgaaaacagaggatgaccccagtttacctccaaattctaat
agaaatcgacctcggggttcagagggccatgcccggatagatgatgactatatgtaa
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