Microtus oregoni (creeping vole): 121442959
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Entry
121442959 CDS
T08307
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
morg04515
]
121442959
Cell adhesion molecules [BR:
morg04515
]
Cadherins
Protocadherins
121442959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121442959
NCBI-ProteinID:
XP_041500536
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MEPRVRRAVQHIRQVLLYFVFLEGSLVLSETWSYSVAEEMETGSSVANIIKDMGVGDLAA
RGARVIFDDYQPYLRLEPETGNLLLNEKLDREALCGTSEPCILHFQVLLENPLQFFQAEL
LVEDINDHTPTFLEKLIFLNISEGASPGSSFQMASAQDLDVGMNGVQNYTISPNPYFYLK
LKDNGKGRKYPELVLDGSLDREKEPSISLILTALDGGSLPRSATALIQVVVVDVNDNAPE
FERTLYEVQVPENSPVDSLVTKVSATDLDTGVNGEISYSFSHVSGDVWKTFRIHPVSGEV
HLKAPLDFEVIQSYTINVQAVDGGSLSGKSAIIVQVIDVNDNPPEIVFTSLMSPIPENCL
SEMVVAVFSVRDQDSGDNGRMLCSIQDNLPFLLKPTFKNFYTLVTENTLDRXSRSEYNIT
ITVSDMGTPRLTTQHTITVQVSDVNDNAPAFTQTSYTLLVQENNSPALHIGTISATDSDS
GSNAHIIYSLLPTHDEQLDLSSLISINANNGQLFVLRALDYEALKTFEFRVGATDQGSPA
LSSQALVRVHVLDANDNAPFVLYPLQNSSAPCTELLPRAAEPGYLVTKVVAVDSDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPRSASVTLHV
LLVDGFSQPFLPLPEVARDPTHDDEDLLTLYLVIALASVSSLFLLSVLLFVGIRLCRRAQ
AASLGGCSVPEGHFPRHLVDVSGAGTLSQSYQYEVCLTGVSDTKDFQLLKSVSPNHEVVN
FMEENSTSVNGFGYN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagagtgaggagggctgttcagcatataaggcaagtgctgctttattttgtt
ttcctggaagggtccttggttctttccgagacctggagctattctgtggcagaagaaatg
gagaccggctcctctgtagccaatataattaaagatatgggtgtgggagacctggctgca
cgaggagccagagttatatttgatgactatcagccttatttgcggttagaacctgagacc
ggcaacttgctcttgaatgaaaagctggacagggaggcactctgtggtaccagtgaaccc
tgtatattgcatttccaggtgttattggaaaatcctttgcaattttttcaggctgagctt
ttggttgaagacataaatgaccatactcccacgttcctagagaaactcatatttctaaat
atctcagaaggtgctagtccaggaagctcattccaaatggctagtgctcaggacttagat
gtaggaatgaacggtgtccaaaattatacaataagccctaacccctatttctaccttaag
ttaaaagacaatggtaagggaagaaaatacccagagttggtactggatggatctctggac
agagaaaaggagccttcaattagtttaatactaacagccctggatggtgggtccctgccc
aggtcagcgacggcactgattcaagttgtggttgtagatgtcaatgacaatgcccctgag
tttgaaagaacactgtatgaggttcaagtaccagagaacagccctgtggactcactggtg
accaaggtgtcggctacagatctggacacaggggtaaatggagaaatatcttattcattt
tctcatgtctctggagatgtatggaaaacattcagaatccatccagtttctggtgaagtc
catttgaaagcacccctagattttgaggtaattcagtcttatacaataaatgttcaagct
gttgacggtgggagtctctctggaaaatcagccattattgttcaagttatagacgtgaat
gacaacccgccagaaatagtctttacgtctcttatgagccccattcccgaaaactgcctg
tcagaaatggtagtcgctgttttcagtgtgagagaccaagactcgggagacaatggccga
atgctgtgctcaattcaagacaaccttccttttctcttgaaacctactttcaaaaatttc
tacactctagtaacagagaatacactggacaggtagagcagatctgagtacaacatcacc
atcacagtcagcgacatgggcacacccaggctcacaacccagcacaccataacagtgcag
gtctctgatgtcaacgacaacgcccccgccttcacacaaacctcctacaccctgttggtc
caggagaacaacagccccgccctgcacataggcaccatcagcgccacagactcagactca
ggctccaatgcccacatcatctactcgctgctgcctacccacgacgagcagctggatctc
tcctcgctcatctccatcaatgcaaacaacgggcagctgttcgtcctcagggcgctggac
tacgaggcgctgaagaccttcgagttccgcgtgggcgccacagaccaaggctcgcccgcg
ctcagtagccaggcgctagtgcgggtccacgtgctggacgccaacgacaatgcacccttc
gtgctctacccgctgcagaattcctctgcaccctgcacagagctgttgcccagagcggcg
gaacccggctacctggtcaccaaggtggtggctgtggacagtgactctggccagaacgcc
tggttgtcgttccagctgctcaaggccacggagcctggactgttcagcgtgtgggctcac
aatggcgaggtgcgcacttccaggctgctgagtgagcgcgatgcgcccaagcacaggctg
ttgctgctggtcaaggacaatggcgatcctccgcggtctgccagtgtcactctgcatgtg
ctgctggtggatggcttctctcagcccttcctgcctctgcctgaggtggcgcgagacccc
acgcacgacgatgaagacttgcttacgctgtatctggttattgccttggcgtctgtgtct
tctctcttcctgttgtctgtgctgctgttcgtgggaataaggctgtgcaggagggcccag
gcggcttctctgggtggttgctctgtgcctgagggacactttcctagacacctggtggac
gtgagcggagcgggtaccttgtcccagagctaccagtatgaggtgtgcctgactggagtg
tcagataccaaagattttcaattactaaaatctgtgtctcccaaccatgaggttgtgaat
ttcatggaagagaactctacttctgtgaatggttttggatacaattaa
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