Microtus oregoni (creeping vole): 121443272
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Entry
121443272 CDS
T08307
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03013
Nucleocytoplasmic transport
morg03250
Viral life cycle - HIV-1
morg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121443272
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121443272
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121443272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121443272
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121443272
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
121443272
NCBI-ProteinID:
XP_041500914
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MASGAGGIGGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRY
FNKNENACSCSTGTGEVPHWPEDREDERVIYAGEDNTNSDDGRITPEPAGSNTEEPSTTS
TASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPVGSSGFSLVKEIKDSTSQHD
DDNISTTSGFSSRASDKDIAVSKSTSLPPLWSPEAERSHSLSHHTATSSKKPAFNLSAFG
TLSTSLGNSSVLKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRNTPYQAPVRRQMKAKQLN
AQSYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDSTAFQAKKEKV
DSQYPPVQRLMTPKPVSIATNRTIYFKPSLTPSGDLRKTNQRIDKKNSAVNEKNISRQNR
EQESGFSYPSFSIPAANGLSSGGGKMRRERTRFAASKPPEEEEVEVPVLPQISLPISSSS
LPVFSFSSPVTPASSSSPVSSSQSLPNKAQTSLGSTGSPVFTFSSPIVKSTQADVLPPAS
IGFTFSVPVAKTELSRFNSSSEPILSSSAQDNTVVNSSNYKKRSATCEDPFKPAKILKEG
SVLDILKTPGFLSPKVDSPAVQPTTTSPVVYTRPAISTFSSSGIEFGESLKAGSSWQCDT
CLLQNKVTDNKCIACQAAKLSPKETAKQAGIGTPSKSDKPASTSGTGFADKFKPAVGTWD
CDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLAVSSESPVTASSSSCTVSTGTLGFGDK
FKRPVGSWECPVCCVCNKAEDNKCVSCMSEKPGSVSASNSSPASDSLSSGGCLGLDKFKK
PEGSWDCEVCLVQNKADSTKCIACESAKPGTKSEFKGFGTSSSLNPAPSAFKFGIPSSSS
GLSQTFTSTGNFKFGDQGGFKLGTSSDSGSTNSMNTNFKFSKPTGDFKFGVSSDSKPEEI
KNDSKNDHFKFGLTSGLSNPASSAPFQFGVSTLGQQEKKEELPKSSSAGFSFGAGVSNPP
TAATDTTVTSDNKSGFNFGPIETKGVSVTPFTYKTTEAKKEDSSVTKGGFTFGKVESASM
FVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSSKPTFSFSVAK
PSVKESEQLAKPTFSFGNQTSTTTDQGVAKPVFSFLNSSSSSSSAPATSSSGGIFGSSTS
SSNPPVAAFVFGQASNPVSSSAFGNSTESSTSQSLLFPQDSKPATTSSTGSAAPPFVFGS
GASSNSTASSGFSFGATTSSSSGSSFVFGTGHSTPSASPAFGANQTPTFGQSQGASQPNP
PSFGSISSSTSLFSAGSQPAAPPTFGAVSSSSQPPVFGQQPSQSAFGSGTAPNSSSVFQF
GSSTTNFNFTNNNPSGVFTFGANPSTPAASAQPSGSGGFPFSQSPASFTLGSNGKNMFSS
SGTSVSGRKIKTAVRRRK
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccggaggcatcggagggggcggcggcggcggcggcaagatccggacg
cgtcgttgccaccaggggccagtgaagccttaccagcaggggcgaccccagcatcagggc
attcttagcagggttacagagtctgttaagaatattgttccagggtggctacaaagatac
ttcaacaagaacgaaaatgcatgtagctgttcaacaggtacaggtgaagttccacactgg
ccggaagatagggaagatgagcgggtaatttatgctggtgaggacaacacaaacagtgat
gatgggagaatcactcctgagccagcaggcagtaacacagaagaaccttcgacaaccagt
accgcctcaaattatccagatgtgttaacaaggccttctcttcatcggagccatctgaat
ttctccatgttggaatcccctgcgttgcattgtcagccttccacgtcctctgcattccca
gttggcagttctggattttccctcgtcaaagaaattaaagattctacctctcagcatgat
gatgataacatctcaactaccagtggtttttcttcaagagcttctgataaagatatagct
gtttcgaagagtacttccctgccaccgctgtggtcccccgaagcagagcgttctcattca
ctctcacatcatactgccaccagctccaaaaaaccagcattcaacttgtctgcctttgga
acactttccacctcacttgggaattcttcagttcttaaaacaagtcagcttggagactct
cctttctatcctggcaaaacaacatacggtggggcagctgctgctgtaagacagaacaaa
gtgcgaaatacgccttaccaggcaccagtgagaagacagatgaaagctaagcagctcaat
gcacagtcttacggtgtgaccagctcaacagcacggcggatattgcagtcattagagaaa
atgtcaagccctcttgcggatgcgaaaagaattccatctgctgtttcttctcctttgaat
tctcctcttgataggagtgggatagacagcacagcttttcaggccaaaaaagaaaaggtg
gactctcagtatccccctgttcagagactaatgaccccaaagccagtttccatagcaaca
aatagaactatctattttaaaccatctctgaccccatctggtgatttaaggaagactaat
caaaggatagataaaaagaacagtgctgtaaatgaaaaaaatatttcaagacaaaataga
gagcaagaaagtggcttttcatatcccagtttcagtattcctgcagccaacggtttatct
tctggaggtggcaagatgagaagagagagaacacgctttgctgcttctaaacctccagag
gaggaggaagtggaagtaccagtgttaccgcagatctctctaccaatcagcagctcctca
ctgcctgtcttcagttttagttcccctgtgacccctgcttcctcatcgtcaccagtcagt
tcttctcagtccttaccaaacaaggcacagacgtctctgggcagcactggcagtcctgtg
ttcacattttcatctcccattgtaaagtctacgcaggcagatgtgctacctccagcgtct
attggatttacatttagtgtgcctgttgcaaaaacagaactttctcgttttaatagttct
tcagaaccaattttaagtagttcagctcaagataacactgtagtgaatagttcaaactat
aagaagcgaagtgccacttgtgaggacccttttaaacctgcaaagattctgaaagaagga
agtgttctagacattctgaagacccctggttttttatcaccaaaggttgattctcctgct
gttcagcccaccactacaagcccagtggtttatacaagaccagccataagtactttttct
tctagtggaattgagtttggagaaagtttaaaagctggatcatcatggcagtgtgacaca
tgtctcctccagaacaaagtcacagacaataagtgtatagcctgtcaagcagctaaactg
tcaccgaaagaaactgctaaacaggctggaattgggacaccaagcaaaagtgacaaacca
gcttctacatcagggacaggctttgcagataagtttaaaccagcagtaggaacttgggat
tgtgatacctgtttagtacaaaataagcctgaagccgtaaaatgtgtagcctgtgaaaca
cccaaacctggcactggtgtgaagcgagtcctcacgttggcggtgtcttcagaaagtcct
gtgactgcttcctcttctagctgcactgtgagcactggtacactaggatttggagataaa
ttcaaaaggcctgtgggatcttgggaatgtccagtatgctgtgtttgtaataaggccgaa
gacaataaatgtgtctcctgtatgtctgagaaaccaggttcggtatctgcctcaaatagc
agccctgcctctgactctctgtcttctggaggctgtctaggattggataagttcaaaaaa
cctgagggcagctgggactgtgaagtgtgcctagtgcaaaataaagcggactctaccaag
tgcatagcatgtgaaagtgcaaagccaggcacaaagtcagagtttaaaggctttgggaca
tcttcatctttaaatccagcaccctcagccttcaaatttggtatcccatcatcctcttct
ggactttctcaaacttttacaagcactggaaattttaaatttggagatcagggaggattc
aaattaggcacttcatcagactctgggtctacaaactccatgaatacaaactttaagttt
tctaaaccaactggagattttaaatttggagtgtcttctgattccaaacctgaagaaatt
aaaaatgacagcaagaatgatcattttaagtttggactgacttctggcttaagcaaccca
gcttcttcagctccatttcagtttggggtatctactcttgggcagcaagaaaagaaagag
gagctcccaaagtcttcatctgcaggctttagctttggtgcaggtgttagtaaccctccc
actgctgctactgacaccacagtgacctcagataacaagagtggcttcaattttggaccc
atagaaactaagggtgtctcggtgaccccttttacatacaagacaacagaagcaaagaaa
gaagattcttctgttaccaagggtgggttcacttttggtaaagtagagtctgcctcaatg
tttgttttgggaaggacagaggagaaacagcaagaacctgttacttctacttctttggta
tttggaaagaaagctgacaatgaggagccaaagtgtcaaccagtattttcctttggaaat
tcggagcaaaccaaagatgagagttcttccaagccaacatttagtttcagtgtggcaaaa
ccatctgtgaaagagtcggagcagctagccaagcccacgttttcgtttggaaatcaaacc
agtactacaactgatcaaggtgtagcaaagccagtgtttagcttcttgaatagcagttcc
tctagttccagtgcaccagccacttcatccagtggtggcatatttggtagttccacctct
tcctccaaccctcctgtggcagcctttgtgtttggacaggccagcaatcctgtcagcagc
tctgccttcggtaactctacagagtccagtacatctcagtctttgttatttcctcaagat
agcaagccagccaccacatccagcactggctcagctgcccctccatttgtgtttggatca
ggagccagcagtaacagtactgcatcttccgggttcagttttggagctaccacatcaagc
tcttcaggatcctcctttgtatttggcactggacattcaacaccatctgccagtccagca
tttggtgctaaccagaccccaacgtttggacaaagtcaaggtgccagccaaccgaaccct
ccaagctttggctctatatcgtcttcaacatcgttgttttctgctggttcccagcccgca
gcaccacctacttttggggcagtgtcaagcagcagccaacctcctgtgtttgggcagcag
cctagtcagtctgcatttggctctgggacagctcccaattccagttctgttttccaattt
ggcagcagcactacaaatttcaacttcacaaataataatccatcaggagtgttcacattt
ggtgcaaatcctagcacgcctgcagcctcagcccaaccctcaggttcagggggcttccca
ttcagccagtctccagcgtcatttacattggggtcaaatgggaaaaatatgttctcttct
tccgggacttcagtttctggtcgcaagataaagactgctgttagacgcaggaaataa
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