Microtus oregoni (creeping vole): 121444899
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Entry
121444899 CDS
T08307
Symbol
Smarca1
Name
(RefSeq) probable global transcription activator SNF2L1 isoform X1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121444899 (Smarca1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
morg03036
]
121444899 (Smarca1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
121444899 (Smarca1)
CERF complex
121444899 (Smarca1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
121444899
NCBI-ProteinID:
XP_041502763
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MEPDTATEAATVATSDARATILVLEDEQPGPSTFKEEGAAAASTEATLATEKGEKKKEKT
TSPFQLKLAAKTSKSEKEMDPEYEEKMVNMPLKADRAKRFEFLLKQTELFAHFIQPSAQK
SPTSPLTMKLARPRVKKDDKQTSVLAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSP
SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH
MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKEVRAAFIRDEMMPGEWDVCVTSYEMVIK
EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLN
FLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKI
YLGLSKMQREWYTKILMKDIDILNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPY
TTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQ
TPHEEREGAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDR
AHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQ
MIRHGATHVFACKESELTDEDITTILERGEKKTAEMNERMQKMGESSLRTFRMDPEQSLY
KFEGEDYREKQKLGMVEWIEPPKRERKASYAVDAYFREALRVSEPKIPKAPRPPKQPNVQ
DFQFFPPRLFELLEKEILYYRKNIGYKVPRNPESPNPAVAQREEQKKIDGAEPLTPQETE
EKDKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCN
ELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEED
RFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKEN
MEIEERERAEKKKRATKTPMSQKRKAESATESSGKKDGKKVKS
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgacacggccacagaggcagccaccgtggcaacctcggatgccagagccaca
atcttggtcctagaggatgagcagcccgggccgtccacctttaaggaggagggagcggct
gccgcctccacggaagccaccttggccactgagaagggcgagaagaagaaggagaaaacc
acttctccatttcaactcaaacttgctgctaaaacttccaaatctgaaaaggaaatggac
ccagaatatgaagagaaaatggtaaatatgcccttgaaagcagatcgagcaaagagattt
gagtttttactgaagcagacagaactttttgcacattttattcaaccttcagcacagaag
tctccaacatctcctctcaccatgaaactggcgcgtcctcgagtaaagaaagatgacaag
cagacctcggttttggctggagactatcgccacaggcgcacagaacaagaagaagatgaa
gaactgctgtcagagagtaggaaaacatcaaatgtgtgtgttagatttgaggtttcacct
tcctatgtgaaaggtggacccctgcgagattatcagattcgaggactgaactggttgatt
tctttgtatgaaaatggagtcaatggtattttagctgacgaaatgggtcttgggaagact
ttacaaaccattgctttgcttggttatctgaagcactacagaaacattcctggaccccac
atggttttagttccaaagtctacgttacacaactggatgaatgaatttaaacgatgggtt
ccgtctctccgtgttatttgttttgttggagacaaagaagtaagagctgcttttatccgt
gatgaaatgatgccaggagagtgggatgtgtgtgtgacttcttatgagatggtaattaaa
gaaaaatctgtgtttaaaaagtttcattggagatacttagtcattgatgaagctcacaga
ataaaaaatgaaaaatctaagctttcagagattgttcgtgagttcaagtccactaatcgc
ttacttctaactgggacacctttgcagaataacctgcatgaactctgggctttacttaac
tttttattgccggatgtctttaattctgcagatgactttgattcttggtttgacactaaa
aattgccttggtgatcaaaagcttgtggaaagactccatgcagttttaaaaccatttctg
ttacgccgtataaaaactgatgtagagaagagtctgcctcctaaaaaggaaataaagatt
tacttgggactgagtaaaatgcaacgggaatggtatacaaaaattctgatgaaagatatc
gatattttaaactcttctggcaagatggacaagatgcgactcttgaatattctgatgcag
ctccgaaagtgttgcaatcatccttatctatttgatggggcagagcctggcccaccttat
acgacagatgagcacattgtcagcaatagtggtaaaatggtagctctggataaactgttg
gcgagaattaaagaacaggggtcaagagttctcattttcagccagatgactcgcctgcta
gacattttggaggattattgtatgtggcgtggctatgagtattgtcgactagatggacaa
accccacatgaagaaagagagggagcgatagaggccttcaatgctcctaatagcagcaaa
ttcatctttatgctgagtacaagggctggaggtcttggaattaacttggcaagtgctgat
gtggttatcctatatgattcagactggaatccacaggttgatctacaagctatggatcgg
gcacatcgcattgggcagaagaagccagtacgagtcttccgtctcattactgacaacaca
gtggaagagaggattgtagagagagctgagataaaactgagacttgattcaattgttata
cagcaaggaagactcattgaccaacaatctaacaagctggcaaaagaggaaatgttgcaa
atgatccgccatggggccacccatgtttttgcctgtaaagaaagtgagctaacagatgaa
gatattacaaccattctggagagaggggaaaagaagactgcagagatgaatgaacgcatg
cagaaaatgggagaatcttctctaagaacttttagaatggaccctgaacaaagtttgtac
aagtttgaaggagaggattatagagaaaaacagaagcttggtatggtggagtggattgaa
cctcctaaacgagaacgcaaagccagctatgcagtggatgcctactttagagaggctttg
cgtgtcagcgagccaaagatccccaaggctcctcgacctccaaaacagccaaatgttcag
gattttcaattttttccaccacgtttatttgagctcctggaaaaggaaattctttattat
cgaaagaatatcggttataaggttccaaggaatcctgagagccctaatccagctgtcgct
caaagagaagagcaaaaaaagatcgatggagctgaacctcttacaccacaagagactgaa
gagaaggacaaacttcttacacaaggtttcacaaactggactaagcgggattttaaccag
tttattaaagcgaatgagaagtatgggagagatgacattgataatatagctcgcgaggta
gagggcaaatcccctgaggaggtcatggagtattcagctgtgttttgggaacgctgcaat
gaattacaggacattgagaaaattatggctcaaattgaacgtggagaagcaagaattcag
cgaaggatcagtattaagaaagcactggatgccaaaattgcaagatacaaggctccattt
catcagttgcgtattcagtatggaaccagtaaaggaaagaactatactgaggaagaggac
agattcttgatctgtatgttacacaaaatgggctttgacagagaaaatgtgtatgaagaa
ttaagacagtgtgtacggaatgctccccagtttagatttgactggttcatcaagtctaga
actgccatggaattccagagacgctgtaacactttgatttcattgattgaaaaagaaaat
atggaaattgaggaaagagagagagcagaaaagaagaaacgggccactaaaactccaatg
tcacagaaaagaaaagcagagtcagctactgagagctctggaaagaaggatggcaagaag
gtgaaatcctaa
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integrated database retrieval system
