KEGG   Microtus oregoni (creeping vole): 121445873
Entry
121445873         CDS       T08307                                 
Symbol
Kdm5b
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
morg  Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:morg00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:morg01009]
    121445873 (Kdm5b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:morg03036]
    121445873 (Kdm5b)
Enzymes [BR:morg01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121445873 (Kdm5b)
Protein phosphatases and associated proteins [BR:morg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121445873 (Kdm5b)
Chromosome and associated proteins [BR:morg03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121445873 (Kdm5b)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 RPEL PHD_4
Other DBs
NCBI-GeneID: 121445873
NCBI-ProteinID: XP_041503966
LinkDB
Position
Unknown
AA seq 1544 aa
MEPATVLPPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILH
PYNLFLSGDSLRCLQKPNLTSDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEEATEARTHNLRRRMGCPTLKCENEKEMKSNVKQEPTEKKDCVLESEKEKPKSRS
KKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKVSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCLQCKTTCFMSAISCSCKPGLLVCLHHVK
QLCSCPPYKYNLRYRYTLDDLYPMMNALKLRAESYNEWSLNVNEALEAKINKKKSLVNFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEF
DVELPQLAEIRIRLEQARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYAAVEKAMAH
LQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEIEEIPAYLPNGAVLKDSVQRARDW
LQDVDALQAGGRVPVLETLIELVARGRSIPVHLNSLPRLELLVAEVQAWKECASKTFLTE
NSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPTGKKKSTKLESLSDLERALTESKETAS
AMATLGEARLREMEALQSLRFANEGKLLSPVQDVEMKVCLCQKTPATPMIQCELCRDAFH
TSCVAVPNISQSPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKLVQDQVGSGLLFSRWQASAGQAPETNKVSQPPGTASFSLPDDWD
NRSSYLHSPFSAGQSCVPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLTKSSSAQQT
DRSSPVRASSDKNDCLRGKRDGINSLERKLKRRPEREGLSSERWDRIKKMRTPQKKKIKL
SHPKDMNNFRLERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAVCPALNCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTAKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggagccggccaccgtgctgcccccaggtccgcgtccggcgctacccctcgggggcccg
ggcccgctgggcgagttcctgcctccccccgagtgtccggtcttcgagcccagctgggaa
gagtttgccgaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccatttgcttgtgacgttgataaa
cttcattttacgccacgtatccagaggctaaatgaactggaggcccaaacacgtgtaaaa
ttgaatttcctggaccagattgcaaagtattgggaactacagggaagtactctgaagatt
ccacatgtggagaggaagatcttagacctgttccagcttaataagttagtcgcagaagaa
ggtgggtttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatgggt
tttgctcctggtaaagctgtgggttcacacatcagggggcattatgagcgaatcctccat
ccgtacaacttattcctgtctggagacagtttgaggtgtcttcagaagcctaacctgacg
tcagatacaaaggacaaggagtacaaaccccatgacattccccagaggcagtctgtacag
ccctcagaaacctgtcctccagcccgccgagcaaagcgcatgagagcagaggctatgaat
attaaaatagaacctgaagaggcaacagaagctaggactcataatctgagacgccgaatg
ggttgtccaactctcaaatgtgaaaatgagaaagaaatgaaaagtaatgtcaagcaagaa
cccactgagaagaaagactgcgtgttagaaagtgagaaggaaaagcccaagagtcgatct
aaaaaagccaccaatgctgtggacctgtatgtatgcctcttatgtggcagcggcaatgat
gaggaccggctcctcctgtgtgacggctgtgatgacagttatcataccttctgcttgatt
ccccctctccatgatgttcctaagggagactggaggtgtcctaagtgtttggctcaggaa
tgtagcaagccacaagaagcatttggctttgaacaagcagcaagggattatactctccgt
acatttggggaaatggcagattcatttaaatctgattacttcaacatgccagtccacatg
gttcctacagagctggtggagaaggagttttggcgactggtaagcactattgaagaagat
gtcactgtggagtatggagctgatattgcttcaaaggagtttggcagtggctttcctgta
cgagatgggaaaatcaaggtttctcctgaggaagaggagtatcttgatagtggctggaat
ttgaacaatatgccagtgatggagcagtctgtccttgctcatattactgcagatatatgt
ggcatgaaactcccttggttgtatgtgggcatgtgcttttcttccttctgttggcacatt
gaagaccactggagctattcaatcaactaccttcactggggtgagccaaaaacctggtat
ggagttccaggatatgctgcagagcagctagaaaatgtaatgaagaaactagctccagag
ctctttgtgtcccagccagatctcctccaccagctggtgaccatcatgaaccccaatact
ctgatgactcatgaagtgcctgtttatcgaacaaatcaatgtgctggggagtttgtgatc
acatttccaagagcctatcacagtggtttcaaccaaggttttaattttgccgaggctgtt
aacttctgcactgttgattggctaccattgggccgccagtgcgtggagcattaccgcttg
ctacaccgttattgtgtcttttcccatgatgagatgatatgcaaaatggcttccaaagct
gatgtactggatgttgtagtcgcatcaactgttcagaaagacatggctattatgattgag
gatgaaaaagctttaagggaaactgtgcgtaaattgggagtaattgactcagaaagaatg
gattttgaactgttgccagatgatgagcgtcagtgtttacaatgcaagacaacatgcttc
atgtctgccatctcctgctcttgtaaacctggcctgcttgtttgcttacatcatgtgaaa
caattgtgttcctgccccccttataagtataacctgcggtatagatacactctggatgac
ctctatcccatgatgaatgcattgaagcttcgagcagagtcttacaatgaatggtcctta
aatgtgaatgaagctttggaagcaaagatcaataagaagaaaagtctggtcaacttcaaa
gctttaattgaagaatcagaaatgaagaagttcccagacaacgatcttctgcgtcacctg
cgcttagtcacgcaggatgcagaaaagtgtgcctctgttgcccagcagctgcttaatggc
aaaagacagacaaggtaccgatctggtggaggaaagtctcagaatcagttgacagtgaat
gaactccgacaatttgtgactcagttgtatgctcttccctgtgtccttagtcaaacacca
ttgctaaaggatctcttgaatcgggtagaagatttccaacaacatagtcagaaactactg
tctgaggaaatgcctagtgctgctgagctacaggacttactggatgtcagctttgaattc
gatgttgaacttccacaactcgctgagattcgtattcgcttagaacaggcccgttggcta
gaagaggtgcaacaggcttgcctagactccagttccctttctttggatgatatgagacga
ctcatagacttaggggtggggctggctccatatgcagcagtggagaaagctatggcccac
ctgcaagaactgcttacagtttcagagcactgggacgacaaagctaaaagtcttcttaga
gcaagaccacggcattctttgagtagccttgctacagcagtaaaggagattgaggagatc
cctgcctatctgcccaatggtgcagtcttaaaagattcagtgcagagagccagagactgg
cttcaagatgtagatgcattgcaggcaggaggacgtgtgccagtgttagaaacactcatc
gaacttgttgcaagaggccgatctatcccagtacatctgaattctttaccaagattggag
ttactagtagccgaggttcaggcttggaaagaatgtgcttctaaaacattcttgactgag
aattctccatattctttgttagaggtgctttgtcctcgttgtgatattggccttttgggg
ttgaaaaggaaacagagaaaattgaaggagcctttaccaactgggaagaagaaaagcacc
aaattagagagtctgagtgacctggagagggccttaactgaaagcaaagagactgcttca
gctatggcaactcttggggaagctcgcctaagagagatggaagctttgcagtctctcaga
tttgccaatgaagggaaattgctgtcacctgtccaagatgtagagatgaaagtctgcctg
tgtcagaagacaccagctactcccatgatccagtgtgaactctgccgcgatgctttccac
accagttgtgtggcagtacctaatatttcacaaagcccccgaatctggctttgtcctcat
tgtcggagatcagagaagcctccattagagaaaattctgcccctgctggcctccctgcag
cgtattcgagttcgtcttcctgagggggatgcacttcgctacatgattgaaagaaccgtg
aactggcaacatagagcccagcaactgctttcttcagggaatctaaaacttgtgcaagac
caagtgggctctggactgttgtttagcagatggcaggcctcagcaggacaggcaccagag
acaaacaaggtgtctcaacctcctggtacagcatccttttccttgcccgatgactgggac
aacagaagctcatatttacattctcccttctctgctggacagagttgtgtccccctccat
ggtgtgagtccagaagtgaatgaattattgatggaagcccagttgctccaggtatccctt
cctgaaattcaggagctttatcagactttacttacaaagtcaagctctgctcaacaaaca
gaccgaagctcaccagttagagccagtagtgacaagaatgattgccttcgaggaaagcga
gatggaatcaacagtctggagagaaaactgaagaggcgccccgaaagagaaggcctttcc
agtgaacggtgggatcggattaaaaaaatgcggacaccccaaaagaagaaaataaaattg
agtcaccccaaggacatgaacaatttcagattagaaagagagcgtagctatgacttagtc
cgtaatgctgaaacgcattccctgccctcagacacgtcctactcggagcaggaggactct
gaggatgaagatgccgtctgtcccgctctgaactgcctgcagccagaaggcgatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcatcaggtctgtgttggtgtc
tctccagagatggcagagaaggaagactacatctgtgtgcgctgcactgcaaaggacgca
ccaagccgaaagtaa

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