KEGG   Microtus oregoni (creeping vole): 121445932
Entry
121445932         CDS       T08307                                 
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03030  DNA replication
morg03410  Base excision repair
morg03420  Nucleotide excision repair
morg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121445932 (Rfc5)
   03410 Base excision repair
    121445932 (Rfc5)
   03420 Nucleotide excision repair
    121445932 (Rfc5)
   03430 Mismatch repair
    121445932 (Rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:morg03032]
    121445932 (Rfc5)
   03036 Chromosome and associated proteins [BR:morg03036]
    121445932 (Rfc5)
   03400 DNA repair and recombination proteins [BR:morg03400]
    121445932 (Rfc5)
DNA replication proteins [BR:morg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121445932 (Rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    121445932 (Rfc5)
Chromosome and associated proteins [BR:morg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121445932 (Rfc5)
DNA repair and recombination proteins [BR:morg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121445932 (Rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    121445932 (Rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 ATPase_2 AAA_19 AAA_30 PhoH TIP49 AAA_7 TniB DNAX_ATPase_lid nSTAND3 Mg_chelatase Thioredoxin_6 bpMoxR AAA_25 NPHP3_N AAA_3 ABC_tran AAA_28 Gp44_lid
Other DBs
NCBI-GeneID: 121445932
NCBI-ProteinID: XP_041504043
LinkDB
Position
Unknown
AA seq 338 aa
MAAAPPQQRPAEARARNLPWVEKYRPQTLGDLISHQDVLSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELM
VPRLEHVIEEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHP
LKTDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLL
TKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVSEA
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcggcggcgcctccgcagcagcggccggccgaggcccgggcccggaacttgccctgg
gttgaaaagtaccggccacagaccctaggcgatctcatttctcatcaggacgttctgagt
accattcagaagttcatcagtgaagaccgcctgccacacctgcttctctatggccctccg
gggacaggaaagacgtccaccatcctggcctgtgccaagcagctgtacaaagataaggaa
tttggctccatggtcttggagctgaatgcttccgatgaccgaggaatagatatcgttcgg
gggccaatcctcagctttgccagcacaaggacaatcttcaagaaaggatttaagcttgtg
atcctggatgaagctgatgccatgactcaagatgcccagaatgccttgagacgagtgatc
gagaagttcacagagaacaccaggttttgcctcatctgtaactacctgtccaagatcatc
cctgccttgcagtcaaggtgcacaaggttccgatttggccctctgacgcctgaactcatg
gttcctcgcctggagcatgtaatagaagaggagaatgttgatataagtgaagatggaatg
aaggcccttgtcactctgtccagtggggatatgcgaagggctttgaacattctgcagagt
accaatatggcctttgggaaggtgacagaagagactgtctacacctgcaccgggcatccc
cttaagacagacattgccaacattctggactggatgctaaatcaagacttcaccactgcc
tacagaaacatcatggagctgaagactctgaagggcttggctctgcatgacatcctgacc
gaggttcacctgtttgtgcacagagttgactttccatcttcagttcggatacatttactg
accaagatggcagacattgagtatagactttccgttggtaccaatgagaagatacagctg
agctccctcattgctgcttttcaagtcaccagagacctgatagtctcagaggcctag

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