Microtus oregoni (creeping vole): 121446011
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Entry
121446011 CDS
T08307
Symbol
Atxn2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg05014
Amyotrophic lateral sclerosis
morg05017
Spinocerebellar ataxia
morg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121446011 (Atxn2)
05017 Spinocerebellar ataxia
121446011 (Atxn2)
05022 Pathways of neurodegeneration - multiple diseases
121446011 (Atxn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121446011 (Atxn2)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121446011 (Atxn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
DUF6090
Motif
Other DBs
NCBI-GeneID:
121446011
NCBI-ProteinID:
XP_041504199
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MRPSTAAAQRPAPGPEPRRLPGWAARRSLPRTARRGGRGGAETYPSAGPPPRGPGAPPRG
PRSPPCASDCFGSNGNGVSRPGSRRLFGVCGPPRPFVVVLLPLAPATAPARACPLGVRAS
PPRSGVSSARPAPGCPRPACEPVYGPLTMSLKPQPPAPASGRKPGGGLLSSPGAAPASAA
SSSSSAVPAPAAPVASSSAAAGVGRPGLGRGRNSSKGLPQPTISFDGIYANVRMVHILTS
VVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSD
FVVVQFKDTDSNYARRDAFTDSAVSAKVNGEHKERDLEPWDAGELTASEELEALENDVSN
GWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQY
KARVALENDDRSEEEKYTAVQRNCSEREGHGTNTRENKYIPPGQRNREVISWGSGRQSSP
RMGQPGPGSMPSRAASHASDFNPNSGSDQRVVNGVFILSFISFVLSGVPWPSPCPSPSSR
PPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTVPKRMSSEGPPR
MSPKAQRHPRNHRVSAGRGSMSSGLEFVSHNPPSEAAAPPVARTSPAGGTWSSVVSGVPR
LSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVSMPVPAASPTPASPASNRALTP
SIEAKESRLQDQRQNSPAGNKETIKANETSPSFSKVENKGMSPVVSEHRKQIDDLKKFKN
DFRLQPSSTSESMDQLLSKNREGEKSRDLIKDKIEASAKDAFIDNSSSNCTSGSSKTNSP
SISPSVLSNTEHKRGPEVTSQGVQTSSPACKQEKDDREEKKDATEQVRKSTLNPNAKEFN
PRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLY
PIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVA
YSPQQFPSQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQFGAHEQ
THAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPSATLHPHTPHPQPSATPTGQQQSQ
HGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYHAGLAPTPPSMTPASNTQSPQSSFPA
AQQTVFTIHPSHVQPAYTTPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAA
LAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgtcgaccgccgccgctcagcggcccgcgccgggaccggagccgcgccgcctg
ccgggctgggccgcgcggcgctcgctcccgcggactgcgcggcgcggcgggcggggcggc
gcagagacgtatccctccgccggccctcccccgcgcggccccggcgcccctccccgcggg
ccgcgctcgccgccctgcgcctcagactgttttggtagcaacggcaacggcgtgtcccgg
cccggctcccggcggctgttcggtgtctgcgggcctccccgccccttcgtcgttgtcctg
ctgcccctggctcccgcgaccgcgccagcccgcgcctgcccgcttggcgtccgcgcgtcc
ccgccgcgctccggcgtctcttcagcgcgcccggctcccggctgtccccgcccggcgtgc
gagccggtgtatgggccgctcaccatgtcgctgaagccgcagccgcccgcgcccgccagt
ggccgcaagcccggcggtggcctgctctcgtcgcccggcgccgcgccggcctcggccgcg
tcgtcttcgtcttccgcggtgccggccccggctgcgccggtggcgtcttcctcggcggcc
gcgggcgtcgggcgccccggtctgggcagaggtcggaacagtagcaaaggactgcctcag
cctacgatttcttttgatggaatttatgcaaacgtgaggatggttcatatacttacatca
gtggttggatcgaaatgtgaagtacaagtgaaaaatggaggtgtatatgaaggagttttt
aaaacatacagtcctaagtgtgatttggtacttgatgctgcacatgagaaaagtacagaa
tccagttcggggccaaaacgtgaagaaataatggagagtattttgttcaaatgctcagac
ttcgttgtagtacaatttaaagatacagactccaattacgcacgaagagatgcttttacc
gactctgctgtcagtgccaaagtgaatggcgagcacaaggagagggacctggagccctgg
gatgcaggggagctcacagccagtgaggagctggaagccctggagaatgatgtgtctaat
ggatgggatcccaatgatatgtttcgatataatgaagagaattacggtgtagtgtccaca
tacgatagcagtttatcttcatatacggttcccttagaaagggataactcagaagagttt
ctaaaacgggaggcaagggcaaaccagttagcagaggaaatcgaatccagtgctcagtac
aaagctcgtgtggcccttgagaatgatgacagaagcgaggaagaaaaatacacagcggtc
cagagaaactgcagtgagcgcgaggggcatggcacaaacactagggaaaataaatatatt
cctcctggacaaagaaacagagaagtcatatcctgggggagtgggagacagagctcgcca
cggatgggccaacctggaccaggctccatgccatcaagagctgcttctcatgcttcagat
ttcaacccgaactctggttcagaccaaagagtagttaatggagtttttatactttccttc
atatcatttgttctgtcaggtgttccctggccatcgccttgcccatctccttcctctcgc
ccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccctaca
aggccgccctccaggcccccctcgaggccatccagacccccgtctcacccctctgctcat
ggttctccagctcctgtctctactgtgcctaaacgcatgtcttcagaaggccctccaagg
atgtctccaaaggcacagcggcaccctcggaatcacagagtctctgctgggagaggctcc
atgtctagcggcctagaatttgtatcccacaatcccccaagtgaagcagctgctcctcca
gtggcaaggaccagtcctgcagggggaacgtggtcctcagttgtcagtggggttccaagg
ttatctccaaaaactcacagacccaggtctcccaggcagaacagtattggaaacactccc
agtgggcctgtgcttgcttctccccaagctggtatcatccctactgaagcagtttccatg
cctgttccagctgcatctcctactcctgccagccctgcatccaacagagctctgacccca
tctattgaggctaaagagtccaggcttcaagatcagaggcagaactctcctgcagggaat
aaggaaactattaaagcaaatgaaacatcacctagcttttcaaaagttgaaaacaaaggt
atgtcaccagttgtttctgaacatagaaaacagattgatgatttaaagaagtttaagaat
gattttaggttacagccaagttctacatctgaatctatggatcaacttctaagcaaaaat
agagagggagaaaagtcacgagatttgattaaagacaaaattgaagcaagtgctaaggat
gctttcattgacaacagcagcagcaactgtaccagtggcagcagcaagaccaacagccct
agcatctccccttctgtacttagtaacacagagcataagagggggcctgaggtcacatcc
caaggggtgcagacttctagtccagcctgcaaacaagagaaggatgaccgagaagagaaa
aaagatgcaactgagcaagttagaaaatcaacattgaatcccaatgcaaaggagttcaac
ccgcgttctttttctcagccaaaaccttctactaccccaacgtcacctcggccacaagca
cagccgagcccatcaatggtgggtcatcagcagccagctccagtgtatacacagcctgtt
tgttttgcaccaaatatgatgtatccggtaccagtgagcccaggcgtgcagcctttatac
ccaatacctatgacgcccatgccagtgaaccaagccaagacatatagagcaggtaaagta
ccaaatatgccccaacagcgacaagaccagcatcatcaaagcaccatgatgcatcctgcc
tcagcagcaggcccacccattgtagccaccccgcccgcttactccactcagtacgttgcc
tacagccctcagcagtttcccagtcagcctctagttcagcatgtgccgcattatcagtct
cagcatcctcatgtgtacagccctgtcatacagggtaatgccagaatgatggcaccacca
gcacatgcacagcctggtttagtatcttcctcggcaactcagttcggggcccatgagcag
acgcatgccatgtatgcatgtcccaaattaccatacaacaaggagacaagcccttctttc
tactttgccatttccacgggctcccttgctcagcagtatgcgcatcctagtgccaccctg
catccacacacgccccaccctcagccttcggccactcccactggacagcaacaaagccag
catggtggaagtcatcctgcacccagtcctgttcagcaccatcagcaccaggccgcccaa
gcgcttcatctggccagtccacagcagcagtcagccatttaccacgctgggctggcacca
accccaccttccatgacacctgcctctaatacacagtctccacagagcagtttcccagca
gcacaacaaacagtcttcaccatccatccttctcatgttcagccggcatataccacccct
ccgcacatggcccacgtacctcaggctcatgtacagtcaggaatggttccttctcatcca
actgcccatgcgccaatgatgctaatgacgacacagccacccggcggtccccaggccgcc
ctcgctcaaagtgcactacagcccattccagtctcgacaacagcgcatttcccctatatg
acgcacccttcagtacaagcccaccaccaacagcagttgtaa
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