Microtus oregoni (creeping vole): 121446534
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Entry
121446534 CDS
T08307
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
121446534 (Shank1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121446534
NCBI-ProteinID:
XP_041505141
LinkDB
All DBs
Position
Unknown
AA seq
2167 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGASESDSSPDGPGRGPQGTRGRGSGAPGNLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGTPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEDTKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGRQESRSDKAKRLFRHYTVGSYDSFDAPSLIDGIDSGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKASQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKIEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYDRPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPGSGGPLPASSPSSFDGPSPPDTRAGGREKSLYHSGALPPAHHHPPHHHHHHVPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTSGAPSPSHHSSSGG
SSGPTQAPALRYFQLPPRAASAAMYVPARTGRGRKGPLVKQTKVEGEPQKGSLAPASSPT
SPALPRPEPPPAGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPDGSGGGGS
SPSPAPATSPVPPSPSPVPTPGSPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTL
FLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESGGSSGGYGAYAAG
SRAYGGSGSSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSDGGGTPQP
PPRPPSPRYDAPPPTLHHHSPHSPHSPHARHEPVLRLWGDPARRELGYRAGLGSQEKALP
ASPPAARRSLLHRLPPSAPGVGPLLLQLGPEPPTPIPGVSKAWRTAATEEPERLPLHVRF
LENCQARPPPAGTRRSSTEDGPGVPPPSPRRVLPASPTSPRGSEENGLPLLVLPPPAPSV
DVDDGEFLFAEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPSPATPLPAAPPPAVAAAP
PTLDSTASSLTSYDSEVATLTQGAPAAPGDTPAPGPPAPAAPAPPAPQPGPDPPPGTDSG
IEEVDSRSSSDHPLETISSASTLSSLSAEGGGNTGGVAGSGAGVASGTELLDTYVAYLDG
QAFGGSGTPGPPYPPQLMTPSKLRGRALGAGGNLRPGPSGGLRDPVTPTSPTVSVTGAGT
DGLLALSACSGPSTAGVAGGSVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGP
LSQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSTDSHHGGASYIPE
RTSSLQRQRLSEDSQTSLLSKPSSSIFQNWPKPPLPPLPTGSGVSSSTAAAPGATSPSAS
PASASTRHLQGVEFEMRPPLLRRAPSPSLLPASDHKVSPAPRPSSLPILPSGPLYPGIFD
IRSSPTGGAGGSADPFAPVFAPPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKP
LGFWTKFDVADWLEWLGLSEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRA
LKFFLER
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gagggggcctcagaatccgacagctccccagacgggccagggagaggcccccaggggact
cggggccggggcagtggagcacctggtaacctggcctctaccagaggcctccagggacgc
tccatgtctgtccctgacgacgcccacttcagcatgatggttttcaggattggcatccct
gacttgcaccagacgaaatgcctgcgcttcaaccccgatgccaccatctggacagccaaa
cagcaagtgctctgtgccctgagtgagagtctgcaggacgtgctcaactatggactgttc
cagccggccacttcaggccgggatgccaacttcctggaagaggagaggctgctgagagag
tacccccagtccttcgagaagggggtaccctacctggagttccgctacaagacacgagtc
tacaaacagaccaacctagatgagaaacagctggccaaattgcacacgaagacggggttg
aagaagttcctggaatatgtgcagctcgggacgtctgacaaggtggcgaggctgctggac
aaggggctggaccccaattaccatgactcagattcaggagagacacctttgaccctggcg
gcccagacggaaggctcagtagaggtgattcgaacgctgtgcctgggtggggctcacata
gacttcagagcccgggatggcatgacagcgctgcacaaggctgcctgtgctcggcactgc
ctggcactcacggcacttctggaccttgggggctcccccaactacaaggaccgccgaggg
ctgacccccctgttccacacagctatggtggggggtgacccccgctgctgcgagctactt
ctgtacaacagggcccagctgggcattgcggatgagaacggctggcaggaaatccaccag
gcctgccaacggggccactctcagcacctggaacacctgctcttctatggggctgaacct
ggagcccagaatgcctcaggaaacacagccctgcacatctgtgctctctacaacaaggag
acctgtgccaggatcctcctctatcgtggagcaaacaaggatgtgaaaaataataacgga
cagacacccttccaggtggctgtgattgctgggaattttgagttgggggaactgatccgt
aaccatcgggaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccgccgt
cggggacccccgggtgcagggctgactgtacccccagcactgctgagagctaacagcgac
acaagcatggcgctgcctgattggatggtgttttcggccccaggggcctcatcatctggg
acccctggccctacctcaggaccccagggccagtcacagccctcggcccccagcactaag
ctcagtagtgggaccctccgaagcgccagcagcccccgaggtgcccgggcacgctcccca
tccagagggagacatcctgaagataccaagagacagcctcgaggccggcccagctccagc
gggacaccccgagaagggccggctgggggaactgggggctctgggggccctgggggctcc
ctgggcagcagaggcagacgtaggaagctctattcagcggtacccggacgctccttcatg
gcggtgaagtcataccaggctcaaggagaaggggagatctctctgagtaaaggcgaaaag
atcaaagtgctcagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgagtt
ggctggttcccctctgactgcctagaagaggtggcaaatcgctcccaggaaggaagacaa
gaaagccgaagtgacaaggcaaagagactcttcaggcattacacagtgggctcctacgac
agcttcgatgccccaagtctgatcgatgggattgactcagggagtgattacatcatcaag
gagaagacagtcttactgcagaagaaggacagtgaggggttcgggttcgtgctacggggg
gccaaggcgcagacccccatcgaggaattcacccccaccccggccttcccggcgctgcag
tacctcgagtctgtggacgagggtggcgtggcatggcgggctggactacgaatgggagac
ttcctcatcgaggtgaatgggcagaacgtagtgaaggttggccaccggcaggttgtcaac
atgatccgccagggaggcaacacactgatggtcaaggtggtaatggtgaccagacaccca
gacatggacgaggctgtccacaagaaagcatcccagcaggctaagcggctcccgccccca
gccatctccctgcgttccaagtctatgacctcagagctggaggaaatggtctccccctgg
aagaagaaaattgaatatgaacaacagccggcaccagtgcccagcatggagaaaaaacgg
accgtgtatcagatggcactcaacaaactggatgagatcttggcagctgctcagcagacc
atcagtgcaagcgagagtcctgggcctggtggccttgcgtccctgggcaagcaccggccc
aaagggttctttgccactgagtcgagctttgatccccaccaccgctcccagccgagttat
gaccggccttccttcctgcctcccggacctggccttatgctccggcagaaatccattggg
gctgcagaagatgacagaccctacctagcacccccagccatgaaattcagccgtagtctg
tcagtccccggttcagaggacatacccccaccacccaccacatccccaccagagcctccc
tatagcacacctccagccccctcctcttccggccgcctcactccgtcccctcggggaggc
ccctttaatcccggttctgggggtccccttcctgcctcctccccttcatctttcgatggg
ccatctcctcctgacacccgcgctgggggccgagagaagagcctgtatcacagtggagcc
ctcccccctgcccaccaccatccacctcaccatcaccatcatcacgtcccacctccgcag
ccccaccatcaccatgcacaccctcctcacccaccggagatggagacaggaggttctccc
gacgatcccccacctcgattggccctgggaccccagcccagccttcgaggctggcggggc
ggaggacccagcccgacctcgggggccccatcaccttcccaccacagcagtagcggaggc
agcagcggccccactcaggctcccgccctgcgctacttccagctgccccccagggcggcc
agtgcagctatgtatgtgcctgcccgcacaggccgcggtcgcaagggcccactggtcaag
cagaccaaagtggaaggcgagccccagaagggcagcctcgctcccgcgtcctccccaaca
tccccagcgttgccacggcctgaaccaccaccggccgggccatcggagaaaaattccatc
cccatccctacaatcatcatcaaagccccatccaccagtagcagcgggcgcagcagccag
gggagcagcacagaggctgagccccccacccagcccgatggctcgggcggcggcggatcc
tcgcccagccctgcgcctgccacgtccccggtgccgccgtctccgtcgcccgtgcccacc
cctgggtcgcccagcggcccagcaaccctggacttcaccagccagtttggagcagccctg
gtgggcgcggcacggagggagggaggctggcagaacgaagcccggcggcggtccacactg
ttcctgtccaccgatgcgggagatgaggatggaggcgacagcgggctgggcccgggggct
cccccaggtccccggctgcgccactccaaatccattgacgaaggcatgttttccgccgag
ccgtacctccggctagagtcagggggcagcagcggaggctatggggcctacgcagccggc
agtcgagcctacgggggcagtgggagcagcagcgccttcaccagcttcctccccccgcgg
cctctggtgcatccgctgactggcaaggccttagatcccgcctctccgctggggctggcc
ttggccgcccgggagcgggccttgaaggagtcctcggacggtgggggcactcctcagccg
cctccgagacccccgtcgccacgctacgatgccccgccgcccaccctccaccaccactcg
cctcactcaccccattcgccacatgcacgtcacgagccagtgttgcgcctgtggggggac
cccgcgcgccgggagctagggtaccgggcaggtctagggagtcaggagaaggcccttccc
gccagtccacctgcagctcgccgctccctactgcaccgtctgcccccgtcagctccaggg
gtcgggccgctcctgctgcagctggggccggaacccccaactcccattcctggggtgagc
aaggcctggcgcactgcggccacggaggagcctgagcggctgcctctgcatgtgcgcttc
cttgagaattgccaggcccggcctcccccagcgggcacgagaaggtcctccactgaagac
gggcccggggtcccaccgcccagccctcgcagggtcttgccagcctctcccacctctccg
cggggcagtgaggagaacggccttccgctgctggtcctgccgccgccagccccttcggtg
gatgtggacgacggcgaattcctcttcgcggagccgctgcctccacccctggagttttcc
aacagtttcgaaaagccagagtcgcccctcacgcccgggcctccccacccgctgcccgac
ccgccctccccagctacccctctacctgcagccccacccccggctgtggccgcagcccct
cccaccctggactccaccgcgtctagcctgacctcttacgacagcgaagtggccacgctg
acccagggggctcccgcggctcccggggatactcctgctccaggcccgccagctccagca
gccccagctcccccagccccgcagccaggccctgatcctccacctggcacggattctgga
attgaggaggtggacagtcggagcagcagcgatcacccgctagagaccatcagcagcgcg
tccacactcagcagtttgtctgccgaaggaggaggcaacacggggggcgtggctgggagc
ggggccggggtggccagtgggactgagctcctggacacctacgtagcctacctggatggc
caggccttcgggggcagtgggactcctggcccaccataccccccacagctcatgactcct
tccaagctccggggccgggcgcttggggctggtggaaatttgagacctggtcccagtggg
ggactccgagatcctgtcacccccaccagccccacggtctctgtgaccggagctggaaca
gatgggcttctggccttgagtgcttgctcaggaccctcgacggcaggtgtggcaggaggt
tccgtggcggttgagccagaagtcccgcctgtacctttgcccactgcctcgtccttgcct
cgaaagctgctaccatgggaggagggtccgggacccccaccaccgcccctgccgggcccc
ctgtcccagcctcaggcctctgccttggccacggtcaaagccagcatcatcagcgaactc
agctcgaagctccagcagtttggtgggtcctctgccgcgggaggagctctgccttgggct
cggggaggcagcgggggcagcacagacagccaccacggaggagccagttacatcccagag
aggacctcctccctgcagcggcagaggctctccgaagactcccagacctctcttctatcc
aaacccagcagcagcatctttcagaattggcctaaaccccctctgcctccactccccacc
ggatctggggtctcctcctcaacagctgcagccccaggagctacatccccttcagcctca
cccgcctcagcttccaccagacacctgcagggcgtggaatttgagatgcggcctccgttg
ctccgccgggcacccagcccctcgctgctgcctgcctcggatcacaaggtcagcccagcg
cccaggccctcttctttgcccatcctgccttcaggacccctctacccgggcatctttgac
atccgtagctccccgaccggaggggcaggaggctcggctgaccctttcgctccagtcttc
gcgccaccacaccccgggatgtctggcggtctcggaggagccttgtcgggagcctctcgc
tctctatcacctacccgcctgctctcgctgcccccggacaagccatttggcgccaagcct
ctcggattctggaccaagtttgacgtcgccgattggctggagtggctgggcttatcagag
cacagagcccagttcctggaccacgagattgatggctcccacctgcccgccttgaccaag
gaggactatgtggacctgggcgtgaccagggtgggccaccgaatgaacattgaccgggct
ctcaaattttttctggagaggtga
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integrated database retrieval system
