KEGG   Microtus oregoni (creeping vole): 121446838
Entry
121446838         CDS       T08307                                 
Symbol
Col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg04151  PI3K-Akt signaling pathway
morg04382  Cornified envelope formation
morg04510  Focal adhesion
morg04512  ECM-receptor interaction
morg04518  Integrin signaling
morg04820  Cytoskeleton in muscle cells
morg04926  Relaxin signaling pathway
morg04933  AGE-RAGE signaling pathway in diabetic complications
morg04974  Protein digestion and absorption
morg05146  Amoebiasis
morg05165  Human papillomavirus infection
morg05200  Pathways in cancer
morg05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:morg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    121446838 (Col4a4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121446838 (Col4a4)
   04518 Integrin signaling
    121446838 (Col4a4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121446838 (Col4a4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121446838 (Col4a4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    121446838 (Col4a4)
  09154 Digestive system
   04974 Protein digestion and absorption
    121446838 (Col4a4)
  09158 Development and regeneration
   04382 Cornified envelope formation
    121446838 (Col4a4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    121446838 (Col4a4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    121446838 (Col4a4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    121446838 (Col4a4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    121446838 (Col4a4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    121446838 (Col4a4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:morg04147]
    121446838 (Col4a4)
   00536 Glycosaminoglycan binding proteins [BR:morg00536]
    121446838 (Col4a4)
Exosome [BR:morg04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121446838 (Col4a4)
Glycosaminoglycan binding proteins [BR:morg00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121446838 (Col4a4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121446838
NCBI-ProteinID: XP_041505608
LinkDB
Position
Unknown
AA seq 1682 aa
MRCFFRWTKPSVTGPWSLIFILFTVRYEYGSGKKYGSPCGGRNCSVCQCFPEKGSRGQPG
PLGPQGPIGPLGPPGPIGIPGEKGLRGVSGLPGAEGEKGDKGPTGVPGFPGLDGVPGHPG
PPGPRGKPGVDGFSGSRGDPGFPGERGAPGPGGPPGQPGENGEKGRSVFISGGIKGIQGD
RGNPGQPGLPGSRGAQGSVGPMGYAGAPGPAGPIGHPGSPGLKGNRAVGIKGQRGDPGEV
GQHGPPGPTLFVQPPDVNLYKGEKGRKGIPGMIGPPGPPGRKGEPGIGTKGEKGIPGFPG
PRGEPGSHGSPGFPGLKGEQGVAGDPGLSGFPGAKGDPGDRGDPGPPGALVTPPPPLKGP
PGDPGPPGRYGEIGDVGLPGPPGPPGRPGETCPGMVGPPGPPGIPGPPGFPGEAGVSKRF
DCAPGEPGKPGPPGLPGAPGPQGTPGSDVIYCSPGCPGPMGEKGKMGPPGRRGAKGEKGN
EGLCVCPPGPMGPPGPPGLPGRQGSKGDLGLPGWHGEKGDPGQPGAEGPPGPQGTPGALG
SPGQKGAKGDMVTSRVKGQKGERGPDGPPGFPGSRGQDGQDGRAGERGDPGPRGDHKDAT
PGERGLPGLPGPRGTTGPVGPPGLGFPGPPGERGQPGEPGHPGMRGIDGMKGQRGDTISC
NVTYPGNPGPPGFDGPPGPKGFPGSPGTPGMRCPDGQKGQQGKPGSPGIPGPPGFRGDMG
DPGIGGEKGTSPSGPPGPPGSPGMDGQKGIPGDPSFGDPGPPGDRGLPGVPGMKGSKGYP
GCPGFEGPPGNPGSPGLKGPKGRQGNPGFPGIPGPPGHSCERGAPGTPGQPGLPGAPGSP
GAPGWKGQSGDMGPSGPAGMKGLPGLPGLPGADGFRGPPGTPGPTGDDGPPGLPGPKGHP
GPPGYRGFPGERGRSGPDGQPGRKGEIGEKGWPGSQGDIGEKGAKGDRGPPGDAGETVII
SRKGEPGESGQPGDDGFPGPRGDKGSPGMQGGRGDPGRDGVPGLHRGPPGLNGPPGPPGP
LGPPGSPGLRGVIGFPGFPGDQGDPGSPGPPGFSGDDGARGPKGSKGDPASQRGPSGPKG
EPGSPGYQGHPGAPGEQGFPGGDGPRGPPGRPGQAGSSGPPGYPGDPGMPGLKGHPGEMG
DPGPRGSPGDLGRPGPPGVKGSPGSPGLNGLHGLKGEKGAKGTSGLHEMGPPGPMGMPGL
KGERGDPGSPGISPPGLSGEKGLPGPPGRPGPPGRIGAPGRPAKGDIPDPGPPGDWGPPG
PDGPRGAPGPPGSPGNVSLLKGDPGDCGLPGPPGSRGPPGPPGCEGAPGCDGKDGQKGPM
GFPGPPGPPGFPGAPGEKGLPGPPGRKGPIGPPGCRGEPGPPADLDSCPRIPGLPGVPGP
RGPEGAVGLPGERGPPGPGCKGEPGPDGRRGQDGFPGSPGPPGHKGDTGEAGYPGAPGPP
GSIGDPGPKGFGPGYLSGFLLVLHSQTDQEPACPMGMPRLWTGFSLLYMEGQEKAHNQDL
GLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLLEEEIRPYISRCA
VCEAPAQAVAVHSQDQSIPPCPRGWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFR
AAPFLECQGRHGTCHVFANKYSFWLTTVSPDQQFSSSPSPDTLKDIQAQRQKISRCQVCL
RI
NT seq 5049 nt   +upstreamnt  +downstreamnt
atgaggtgctttttcagatggaccaagccctcagtcacaggcccctggtcactaattttt
attctctttaccgtacgatatgaatatgggagtggcaagaagtatggcagcccctgtgga
ggaagaaactgctctgtctgccagtgttttcctgaaaagggatctcggggtcaaccagga
ccactggggccacagggaccaatagggcccttgggaccgccgggacccattgggattcca
ggagagaaaggactgagaggtgtcagtggcttgcctggagcagaaggagagaaaggagac
aagggtccaactggtgtccctggatttccaggtttggatggcgtaccaggtcacccagga
cctcctggacccagaggcaaacctggcgtggatggtttcagtggctcaagaggtgatcca
ggatttccaggagaaagaggagcgcctggcccaggaggcccccctggtcagccaggagaa
aatggagaaaaaggaagatcggtgttcatttccggtggcattaaaggtattcagggagac
cgtgggaacccaggacagcccggcttgccaggatctaggggtgcccaaggatcagtaggg
cccatggggtatgctggtgcaccagggcctgcagggcctataggtcatcctgggagccct
gggttgaagggaaatcgtgctgtgggaataaaggggcaaaggggagacccgggtgaagtt
ggccagcatggtcctcctgggcccaccctgtttgtacagccacctgatgtgaacctctat
aaaggagaaaagggtagaaaaggaattcccggaatgattggacctccaggacctccagga
cgcaagggagagcctggtatcggaaccaaaggagagaaaggtattcctgggttcccagga
cctcggggcgagcctggttcccatggatctccaggttttccaggactcaagggagaacaa
ggagtggctggagatcctggactgtctggctttcctggtgcaaagggggatcccggagat
cgcggggacccaggaccacctggtgctttggtaactccccctcctccactcaaaggtcct
ccaggggacccagggccccctggccgctatggagaaattggagatgttggactaccaggt
cctcccgggcccccaggcagaccaggagaaacttgcccaggcatggtgggaccccctggg
ccaccagggattcctggtcctccaggatttccaggggaagctggtgtttctaaaagattc
gactgtgctccaggagaaccagggaagccaggaccacctggccttcctggagcaccagga
ccacagggcacccctggatcagatgttatatattgcagccctgggtgtcctggaccaatg
ggagaaaagggaaaaatgggtcccccaggaagaagaggagccaaaggagaaaaaggaaat
gagggactctgtgtctgtccacctggtcccatgggaccccctggccctccaggacttcct
ggaagacaaggaagtaaaggagacttagggcttcctggctggcacggagaaaagggtgat
ccaggccagcctggtgctgaaggacctccagggccccaaggaacgcctggtgccttgggg
tcccctggccaaaaaggggcaaagggtgacatggtcacatcaagagtgaaagggcagaaa
ggagaaagagggcctgatgggccaccaggatttccagggtcacgtggacaagacggtcag
gatggacgtgctggagaaagaggggatccggggcccagaggtgaccataaggatgcgacc
cctggtgagagagggcttcccggactgccaggtcctcgagggacaacaggacctgtggga
cctccaggactgggatttccaggcccaccaggagagagaggccagccaggagagcccggg
catccaggcatgaggggtattgatggcatgaaggggcagagaggtgacaccatttcttgc
aatgtaacctatccagggaatccaggccctccaggttttgatggacctccaggtccgaag
gggtttccaggttcccctggaactccaggaatgagatgtccagacgggcagaaaggccag
cagggcaagccaggaagtcctggaattccaggtccacctggttttcgtggtgacatggga
gatccaggcattggaggcgaaaaggggacctcccctagcggacccccaggtccacctggg
tctcctggaatggatggccagaaaggaatcccaggagacccttcgtttggtgatccagga
ccccctggagataggggtcttccaggagtgccaggcatgaaaggaagcaaaggttaccca
ggatgcccagggtttgaagggccacctggcaaccctggatctccaggtctcaaaggtccc
aaaggcagacagggaaatcctgggtttccagggatcccaggaccccccggtcattcctgt
gaaagaggtgctccagggaccccaggacaaccaggacttcctggagctcctggtagtcca
ggggccccaggttggaaaggccagtcaggagacatggggccttctggaccagctgggatg
aagggcctccctggcctcccaggccttccaggagcagatggtttccgagggcctcctggg
actccaggccccactggagatgatggcccacctggccttccaggcccaaagggacaccca
gggccgcctggttaccgtggttttccaggagagagaggaaggtcaggcccagatggacaa
cctggaagaaagggagaaattggagagaagggctggcctggctcccagggagacatagga
gagaaaggagccaaaggagacagaggacctcccggtgatgcaggagaaacagtcatcatt
tccagaaagggggagcctggggaatctgggcagccaggagatgatgggttcccaggaccg
agaggtgataaaggaagcccagggatgcaagggggaagaggagatcccggaagagatgga
gtacctggattgcacagaggaccgcctgggttaaatgggcctcctgggcctcccggcccc
cttggccctccaggctcacctggattaaggggagtcattggctttccaggatttccaggt
gaccagggtgatccaggttctccaggtccccctggattttcaggagatgatggagcaaga
ggacctaaaggaagcaaaggcgaccctgccagtcagcgtggtccatctggtccgaagggt
gagccaggtagtcctggataccaaggacatcctggggcccctggagagcaaggctttcct
ggaggtgatgggcctagaggaccaccgggcagacctggacaagctggctcttctggacca
ccaggatatccaggtgacccagggatgcctgggctgaagggccacccaggagaaatggga
gaccctgggccaagaggttccccgggagatttagggaggccaggtcctccgggagtaaaa
gggtcccccgggtctcctggtctgaacggcttgcacggtctcaagggtgagaaaggagcc
aaaggtacctcaggtctgcatgaaatgggtccgcctgggcccatgggaatgcctgggcta
aagggagagagaggtgaccctgggagcccaggaatttctcccccaggtctttctggagaa
aaaggcctcccaggacccccagggagaccaggaccacctggtcgcataggtgctccagga
agacctgctaaaggtgacattcctgatccaggtccacctggagactggggacctcccggc
cctgatggcccaagaggagcacctgggcctccaggctcccccgggaatgtgagccttctg
aaaggggatccaggtgactgtggtttgcctggaccacctggttctagaggcccaccaggc
cctccagggtgtgagggcgccccaggatgtgatggcaaagatggtcagaaaggaccaatg
ggtttcccagggcctccagggccacctggttttcctggggcacctggagagaagggacta
cctggccctccaggaagaaaagggcccataggccctccaggctgcagaggtgaaccgggg
cctcctgccgacctggattcctgtcctcggatcccaggacttcctggagtgccaggcccc
agaggaccagagggagctgtagggcttcctggagagagaggcccccctggaccagggtgc
aaaggagagcctgggccggatggcaggaggggccaggatggcttccctggatctcctggg
cccccaggacacaaaggcgacactggagaggctggctaccccggagcaccaggccctcct
ggttcgattggtgatcctgggcccaaggggtttggccctggatacctcagtggctttctc
cttgttctccacagtcagacagatcaagaacctgcctgccctatgggtatgccccggctt
tggactgggttcagcctgttatacatggaaggacaggagaaggcacacaatcaagatctc
ggtttggcggggtcttgtcttcccgtgtttagcacactaccctttgcctactgcaacatt
caccaagtgtgccactatgcccagagaaatgacaggtcctactggttggctagcgcggct
cctcttcccatgatgccactcttggaggaagagatccgcccttacatcagccgctgcgcc
gtgtgtgaggccccagcccaggcagtggccgtgcacagtcaggaccaatccattccacca
tgtccacgtgggtggaggagcctttggatcggatactcattcctgatgcacactggagct
ggggaccaaggaggagggcaggccctcatgtcacctggcagctgcctagaagacttcaga
gctgcaccattccttgaatgccagggccgacatggaacctgtcacgtttttgccaataaa
tacagcttctggctgaccacggtgagcccagaccagcagttttcctctagcccgtcaccg
gacaccttgaaagacattcaggcccagcgccagaaaatcagccggtgccaggtctgcctg
cgaatttaa

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