Microtus oregoni (creeping vole): 121446977
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Entry
121446977 CDS
T08307
Symbol
Taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121446977 (Taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121446977 (Taf5l)
03036 Chromosome and associated proteins [BR:
morg03036
]
121446977 (Taf5l)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121446977 (Taf5l)
Coactivators
SAGA/TFTC/STAGA complex
121446977 (Taf5l)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121446977 (Taf5l)
STAGA complex
121446977 (Taf5l)
TFTC complex
121446977 (Taf5l)
SAGA complex
121446977 (Taf5l)
SLIK complex
121446977 (Taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
WD_LRWD1
Ge1_WD40
Nbas_N
WDR54
Motif
Other DBs
NCBI-GeneID:
121446977
NCBI-ProteinID:
XP_041505857
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRGRTEQVQVAVSCYLKRRQYMDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANAVSA
APCQAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQSGPKSTVESFY
SRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLAVHIHLDVQPAKRTDYQLYASGGSSRSESSSLEPPDVPNPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHLVDTSRIRLACDTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADNSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLALSFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIR
STSCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggggcgcacggagcaggttcaggtggcagtgtcctgctacctcaaacgccgg
cagtacatggactcagaaggccccttgaagcaaggcctaagactatcacagactcctgag
gagatggcagccaacctcacagtccaatcagaatctggttgtgccaatgcagtgtctgca
gccccttgccaggcagaaccccaacaatatgaagtacagtttggacgactgagaagcttt
ctcactgattctgactcccagcacagtcatgaagttatgcctctcctctacccccttttt
gtctacctccacctcaacctggtccagagtggccccaaaagcacagtggaaagcttctat
agccgcttccatggaatgttcctacaaaatgcaagccagaaggacatcattgagcagctg
caaaccacacagaccatccaggacattctgtcaaacttccaacttcgtgcattcctggac
aataagtacgtggtccgtctccaggaagatagctacaactaccttatccgctacctccaa
agcgataacaacactgccctgtgcaaggtgcttgccgtgcacattcacctggacgtgcag
cctgccaagaggacagactaccagctgtatgccagtggtggctcctcgcgcagtgagagc
agcagcctggaaccaccagatgtgcccaaccctattctgcagaatgaggctgccctggaa
gtcttgcaggaaagtatcaagcgagtcaaggatggacctccttccctcaccaccatctgc
ttctatgccttctataacacagagcagctgctgaatactgcagagatctcctctgatagc
aaacttctggctgctggatttgacaattcctgcataaagctctggagcttgcggtccaaa
aagctgaaatcagagccccaccttgtggacacatctcgtatccgtctagcctgtgacact
ttggaggaggaggagaatgaggaagacaatacaggcacagagatgaagatcctgcgtgga
cactgtggcccggtatacagcacacggttccttgcagacaactcggggctgctctcttgt
tctgaagatatgtccatcaggtactgggacctggggagcttcaccaacactgtgctctat
cagggacatgcctaccctgtgtgggacgtggacatcagcccctacagcctgtattttgcc
agtgggtcccatgaccgtactgccaggctttggtcctttgatcggacgtacccgctgagg
atatatgcaggacacctggctgacgtagactgtgtcaaattccaccccaactcaaactac
ttggctacaggttccactgacaaaactgtccggctgtggagtgcccagcagggcaactca
gtgcggctcttcacagggcaccgaggtcccgtgctcgccctttccttctctcccaacggt
aagtacttggcctccgctggtgaggaccagcggttaaagctgtgggacttggcctctggg
acactttttaaagaactgagaggccacacagatagtatcaccagtctggcttttagccca
gacagtggtctggttgcctctgcctccatggacaactctgtgcgtgtctgggacatcaga
agcacgtcctgcaacacacctgctgatggctcttcaggtgagcttgtgggcgtgtacact
ggacagatgagcaacgtcctgagtgtacagttcatggcctgcaacctcctcctggtgact
ggaatcacacaagagaatcaagaacattaa
DBGET
integrated database retrieval system
