Microtus oregoni (creeping vole): 121447065
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Entry
121447065 CDS
T08307
Symbol
Taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121447065 (Taf1c)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121447065 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
121447065
NCBI-ProteinID:
XP_041506029
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MDFPSSLRPSLFMTGPLGMTDGPDLSFMCSWRDALTIPGSQPPDCKDRTVPLVKNLLWEP
TTPGPLPLLPPDPDPWEPGMTPRDLLFRGGHRYQFRPQVGLDVTEQLSRFLWDHGDIAFA
PLGRLMLENFRLEGNKGYSKKMTIVSVKRLLQDLGGHQPWGCPWAFLSRRLRRFSILGGP
VLSRSVSVLLGRLLHEELALRWEQLLLDEAFTGGALAWLPGRTARVGQLVYPSGGALDKL
YFQEVSVNSGGNPRVFEDPGHIQLRGPVRQVVTSTVQGETFLAVRSDYHCAVWKTDKQGP
PAPLKVLQVEKGATGVNLSPHLPGEMAICSRSGTVCLWTPQDGLQLVYKDPETLAFRDPS
PWRWADFTAHPRVLTVGDRTGVKMVDIQGPPGCGLLLFRAGAEAACQKGERVLLAQYLGQ
PGPACTPLHLICTQFSIYLMDERLPMVPMLKWDHGLPSSPLFARLLPPASPGFPRPLLLG
GQGGQLQLLHIAGEGPSMPQLAGPPQSLPSIVDSLSAFPPLEPRRQQQLQERLEAPVIGL
AAAPPCASVPALLLFQLSAAGDIFYQHLRLQSASSLGEGTPDHPATEGPAPKATAPMDQS
SWTPQASVRCSRWAEALMELSPTCPVWAAPTFSHRRFLGHMEQQKSQPMSQKLRAAMAKG
QLLRPEDLGTLPRAEPPPGPQCSQQDELTERLAEAWENGIAAWWKGHRGQTSGSMTQTKR
PKRRTQLSSTFSSLTSYLDIPDTSSPSCSQNLSTSEAGPQPPGTQPSQELTQELWTESVQ
HERQQILQDYMAKLPLQKDTPGPVATPPSQASSLRAMPLRRQAPVLSGSHPPRKKSRMGF
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggatttccccagctccctgcgcccctcattgtttatgactggtcctcttggcatgact
gatggccctgacctgtccttcatgtgcagctggagagatgcactcaccatacctgggtct
cagcccccggactgcaaggaccggacagtgccattggtcaagaacctgctgtgggagcca
acgacaccaggacccctccccctgctgcctcctgatcctgatccctgggaacctggcatg
acccctcgggacctccttttccggggaggtcaccgctaccagttccgacctcaagttggg
ctggatgtcactgagcagctcagccgcttcctgtgggaccatggggacatagccttcgca
cccctggggaggctcatgctggagaacttcagattggagggaaacaagggctactcgaaa
aagatgaccatagtcagcgtgaagaggctgcttcaggacctcggtggacaccagccatgg
gggtgtccttgggctttccttagccgccggctccgtcgcttctccatccttgggggtcct
gtcctgagtaggtcagtgtccgtgcttctgggccggctgctgcatgaagagctggctctg
cggtgggagcagttgctgctggatgaggccttcactgggggtgccttggcctggctccct
ggaaggacagcccgggttggacagctggtctaccctagtggaggtgccctggacaagctg
tatttccaggaggtcagtgtgaactcaggtggcaatccccgggtctttgaggaccctggg
catatccagctgcggggacctgtacggcaggtggtgaccagcactgtccagggagaaaca
ttcctggccgtccgctctgactaccactgtgccgtgtggaagactgataagcaagggccg
ccagcacccctgaaggtgctgcaggtggaaaagggggccactggtgttaacctcagccct
cacctgccaggagagatggctatctgcagccgttctggaactgtatgtctgtggacccca
caagatgggctgcagctagtctacaaggaccctgagacgcttgccttccgtgatccttct
ccctggcgctgggcagacttcactgcccacccccgggtgctgaccgtgggtgaccgcaca
ggtgtgaagatggttgatattcagggacccccaggctgtgggctgctgctgttccgtgct
ggagcagaggctgcttgccagaaaggagagcgggtgctgctggcccagtaccttgggcag
ccgggtcccgcctgtactcctctgcatctcatctgcacccagttctcgatttacctgatg
gatgagcgcctacccatggtgccaatgctcaagtgggaccatggtctgccatcttctccc
ctgtttgctcgcctgctacccccagctagccctggattcccacggcccctgctactgggg
ggccagggtggacaacttcagctgctgcatatagcaggagagggcccttccatgccccag
ctggcagggcctcctcagtctctgccctccatcgtcgactccctttccgcctttccccca
ctggaacccaggaggcagcagcaactgcaggagcgtctggaggcaccagtcataggtctg
gctgctgccccaccctgtgcctctgtccctgcgctgctgctcttccagctctcagcagct
ggagacatcttttaccagcacctacgcctccagtcagcctccagtcttggagaaggaaca
cctgatcacccagcaacagagggccctgcacccaaggcaacagcacctatggatcagtcc
tcttggacccctcaggccagtgtccgctgcagccgctgggcagaagccctgatggagctg
tcccctacttgtccagtgtgggctgcccccaccttttcccaccgccgttttctgggccac
atggagcagcagaaaagccagcccatgtcacagaagctccgagcagccatggccaaggga
cagctcttgcgacctgaggatctgggtacactccccagggcagagccgccccctggacct
cagtgcagccagcaggatgagctcactgagcgcttggcagaagcctgggaaaatgggata
gctgcctggtggaaagggcaccgaggtcagacctcagggtccatgacacagaccaagcgg
ccaaagcgccggactcagctgtctagcaccttttcctcactcacaagctacttggacatc
ccagataccagcagcccctcttgtagccaaaatctttctacctcagaggccgggcctcag
cccccagggacccagccctcccaggagttgacacaggagctgtggacggaaagtgtgcag
catgaacgtcaacagatactccaggactacatggccaagctgccacttcagaaggacact
ccaggacctgtggctacacctccttcccaggcttccagcctccgggccatgcctttgagg
cggcaggcacctgtcctgtctggctcccatcctccccggaagaagtcacggatgggcttc
tga
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