Microtus oregoni (creeping vole): 121447374
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Entry
121447374 CDS
T08307
Symbol
Prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121447374 (Prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121447374 (Prpf38b)
Spliceosome [BR:
morg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121447374 (Prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
121447374 (Prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
121447374
NCBI-ProteinID:
XP_041506503
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAVAQQQQPCGGGGGATKPAVSGKQGNVLPLWGNEKTMNLN
PMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGV
GTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE
PFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRK
IKKDGKEGVEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREK
ERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKE
NERGRRRDRDYDKERGERDRERSRERSKEQRSRGEGEEKKHKEDKEDRRHRDDKKDSKKK
HSRSRSRERKHRSRSRSRNAGKRSRSRSKDKSSKHKNESKEKSNKRSRSGSQGRTGSVEK
LRKREHSPSKEKSRKRSRSQDRSHKKDHGDGKDQSDRQDHQRSQSVEPESQEREHKNKDE
TV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcaaccgcagcaccaggcggccgcg
gccgtggcccagcagcagcagccatgcggcggcggcggcggcgccaccaagccggcggtg
tcgggcaagcagggcaacgtactgccgctgtggggcaacgagaagaccatgaacctcaac
cccatgatcctcaccaacatcctgtcgtcgccttacttcaaagtgcagctttacgagctc
aagacctaccacgaggtggtggacgagatctactttaaggtcacacatgttgagccatgg
gagaaaggaagcaggaagacagctggccagacggggatgtgcggaggggttcgaggtgtt
ggaacaggaggcattgtttctaccgctttttgtctgttatacaaattattcaccctgaag
ttaactcgaaagcaagtgatgggtctcataacacatacagactctccgtatattagagcc
cttggatttatgtatataaggtatacacaacctcctacagacctgtgggactggtttgag
cccttccttgatgatgaggaggacctagatgtgaaagctggcggaggctgcgtaatgacc
attggagaaatgcttcgctcctttctcacaaagctggagtggttctctacgttgtttcca
agaatcccagttccagttcagaagaatattgatcaacagattaagacccggcctaggaag
attaaaaaagatggcaaggaaggggttgaggagatagacagacatgttgagcgccggcga
tccaggtctccaaggagatcactgagtccacggagatctccaagaagatccagaagtaga
agtcatcaccgggagggccatggatcttctagttttgacagagaattagaaagagagaaa
gaacggcagcgactagagcgggaagccaaagagagagagaaggaaaggcgaagatcccga
agtattgatcgggggttagagcgcaggcgcagccggagtagggaaaggcatagaagtcgc
agtcgaagtcgtgataggaaaggggacagaagagacagggatcgggaaagagagaaagaa
aatgagagaggtcgaagacgagatcgagattatgataaagagagaggagaaagggaccgg
gagagatcgagagagcgctccaaggagcagaggagtaggggtgagggagaggagaagaag
cacaaagaagacaaggaggataggcgccacagagacgacaagaaagattccaagaaaaaa
cacagcaggagtagaagcagagaaaggaaacacagaagtagaagcagaagcagaaatgca
gggaaacggagcaggagcaggagcaaagacaagtcaagcaaacataaaaacgaaagcaaa
gaaaagtcaaataaaagaagtagaagtggcagtcaaggaagaactggcagtgttgaaaaa
ttgagaaaacgagaacacagccctagcaaagagaagtctagaaagcgcagccgaagccaa
gaccgctcccacaagaaagatcatggggatggcaaggaccagtcagacagacaggatcat
cagaggagccagagtgtagaaccagagagccaagaaagagaacataaaaacaaagatgag
actgtgtga
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