Microtus oregoni (creeping vole): 121448206
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Entry
121448206 CDS
T08307
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121448206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121448206
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
121448206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
121448206
NCBI-ProteinID:
XP_041507957
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MAPPSPREHQAAAATSATKPDEEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPAFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRRTVTELEDKFDLLVDANDVI
LERVGILLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNI
LRPQLRFREKIDNSNTPFLPKIFVKPNARKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPESVLQKPRPQLYRPVEETPCHFVSSLDQLVEL
NEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQ
LADWRIRPLPEEMLTYARDDTHYLLYIYDRMRLELWERGNDQPVQLQVVWQRSRDICLKK
FVKPVFTDESYLELYRKQKKHLNSQQLAAFQLLFSWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSETAAGVKKSRPLPSAE
RLENELFGPHDCSHAPPDNYSITPTDGSVPLQKQPSLFAEGEEETSVDARCLLATAVITI
FSEPSAEENGKTPLTVAQKKAQNIMESFENPFRMFLPSLEHKAHISQAAKFDPSSKIYEI
SNRWKLASQVQKEPKEATTKKAAEQTAARKQAKEESEAAALEQAIPVRQQAALENATKKR
ERATSDLRTTEQKQEKKRLKSSKKPKDPDPPGKDFTPYDYNQSDFRAFAGDSKSKPSSQF
DPNKPAPSGKKCVTAKKCKQSMGNKSMSFLAGKSDRGFRHNWPKR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtccccgggagcatcaggccgcggcagccactagcgcgaccaagcct
gacgaggagatggtgctgcctggcttccccgacgcagacagcttcgtgaaatttgccctt
gggtcagtagtggcggtgaccaaggcatctgggggcctgccacagtttggcgacgagtat
gacttttaccgaagttttcctgccttccaggcgttttgtgaaacccaaggagacaggttg
cttcagtgcatgagtagggtaatgcagtaccacgggtgtcgcagcaacattaaagatcgg
aggaccgtgactgaattggaggacaagttcgatttactggttgatgccaacgatgtgatt
ttggagagagtgggtatattactggatgaagcatcaggtgtgaataagcaccaacagccc
gtcctccctgcaggactgcaggtccccaaaacaatagtgtctagctggaaccggaaggca
ggagaatatgggaaaaaagcaaaatctgagactttccgactgctgcatgcaaaaaacatc
ctccgacctcagctcagatttcgggagaagattgataattcgaacacgccctttctcccc
aaaatctttgtcaagcccaatgctcggaagcccctccctcaggctctctcaaaagaaagg
cgggaacgtccacaggatcgtcctgaggacctggacgtgccccctgccctggcagatttc
atccatcagcagaggacccagcaggttgaacaggacatgtttgcacatccttatcagtat
gaactcgatcacttcactccacctgagtcagtgcttcagaagccgcggccacagttgtac
agacctgtggaagagacaccctgccactttgtatcctccctggaccaactcgtggagctc
aacgagaagctcctgggttgtcaggagtttgcagtggatctagagcatcactcatacaga
agcttcctaggattgacctgcctgatgcaaatttccacccggacggaagacttcatcatt
gacaccctagagcttcgaagtgacatgtacattctcaatgagagcctcacagacccggcc
attgttaaggtcttccatggtgctgactctgacatagagtggctacagaaagacttcggg
ctctatgtggtgaacatgtttgacacacaccaggcagcacggcttctcaacctggctcgt
cactcacttgaccatctgctgagactgtactgtggtgtggagtcaaacaagcagtatcag
ctggcagattggaggatacgccctctgccagaagaaatgctgacctacgcccgggatgac
acccattacctgctttacatctatgaccgcatgaggctggagctgtgggagagaggcaac
gaccagcctgtccagttgcaggtggtgtggcagcggagcagggacatatgcctcaagaaa
tttgtcaagcctgtctttacggatgagtcctaccttgagctgtatcgaaagcagaaaaag
catttgaactcacagcagctggcggcctttcagctgctgttttcctggagggataaaaca
gcccgcagggaggatgagagctacggatatgttctacccaatcacatgatgctaaagata
gccgaggaactgcctaaggaacctcaaggcatcatagcttgctgcaacccggtcccacct
cttgttcggcagcagatcaatgagatgcatctcttaatccagcaggctcgagagatgccc
ctgctcaagtctgaaactgcagctggagtgaagaagagcagaccactgcctagcgccgag
agattggagaatgagctctttggaccccatgactgttcccacgcccctccagataactac
tcgatcaccccaactgatgggtctgtgccacttcagaaacagccaagcctctttgctgag
ggcgaagaagagacctctgtcgatgccagatgccttcttgctacagccgtcatcactatc
tttagtgaacctagtgctgaggaaaatggaaagactccattgacagtggcacagaaaaaa
gctcagaacataatggagtcctttgaaaacccatttagaatgttcctgccttctctggaa
cacaaggcccacatttctcaagcagcaaagtttgatccttcttcaaaaatctatgaaatc
agcaaccgctggaagctggccagccaggtccagaaagaacctaaagaagcaaccacgaag
aaggctgctgagcaaacagctgcccggaaacaggcaaaggaggagtctgaggctgctgcg
ctggaacaggccatcccggtgcggcaacaggccgcactagaaaatgccactaagaagaga
gagagagccacaagtgacctgaggaccacagaacaaaagcaggagaagaaacggttgaaa
agctccaagaaacccaaggatccagaccccccaggaaaggatttcacaccttacgactac
aaccagtcagacttcagggcctttgctggggacagcaaatccaagccctcctcccagttt
gacccaaataagccggcaccttctggcaagaaatgtgttacagccaagaaatgtaaacag
tcgatggggaacaaaagcatgtcgtttctggctgggaagtcagacagaggcttccggcac
aactggccaaagagatag
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