Microtus oregoni (creeping vole): 121448227
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Entry
121448227 CDS
T08307
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04120
Ubiquitin mediated proteolysis
morg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121448227
04120 Ubiquitin mediated proteolysis
121448227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
morg04121
]
121448227
Enzymes [BR:
morg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121448227
Ubiquitin system [BR:
morg04121
]
Ubiquitin ligases (E3)
U-box type E3
121448227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
121448227
NCBI-ProteinID:
XP_041507998
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPIPASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSEKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPISTAARSPD
RNLMLNTGSNPGTSPMFCSLGSFGASSLSSLYETSPAPAASFWSFAPGLSPSLASPSRAA
PQVAVPPASPSPHSAARQVAVPATSPSPHSPHSAARQVAVPATSPSPHSAARQVAVPPAS
PSPHSAARQVAVPPASPNPHRAARRVAVPPTSLSPHSAASGTVAGSQASSPRYRPYTLMH
PWGSSPCPTPRPSIQANSPGFPARPSSPRAVPVSSSRQRPRSRGPAFPPGSPSAASRRPS
SLRTSPSLGASGGASNWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPA
VSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQD
EEVFKQIFIPVLQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCSLVASLPLW
LPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSGPTITLENTRVVSQSLQHY
LELGRQELFKILHSVLLNGETREAALSYMAAIVNANMKKAQMQADDRLVSTDGFMLNLLW
VLQQLSTKIKLETVDPTYIFHPKCRINLPNDETRINATMEDVNEWLAELYGDQPPFSEPK
FPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKSNESQWKDSPLAPRHREM
LKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLMLRILDPAYPDVTLPLSSD
VPKAFAALPEFYIEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVA
KLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTI
RYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQ
EEMKNKEQWDQLPRDQQQARQSQLSQDERVSRSYLALATETVDMFHLLTKQVQKPFLRPE
LGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIA
DDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEF
RDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQMLTENMLEPVPELKEQIQA
WMREKQSSDH
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgccggaggcgcctggcacgacttgctggtgga
cagacctcccaaccgagcaccccgcttacgtctccccagagggagaaccctccaggacct
ccaatacctgcatcagccccaggcccttcccagagtcttggtctcaatgtccacaacatg
accccagctacctcccccataggtgcagcaggagttgcccatcggagccagagcagcgaa
ggagtcagctctctgagcagctcaccgtccaacagccttgagacgcagtctcagtccctc
tcccgttcccagagcatggatattgacggcgtctcctgtgagaaaagcatgtcccaggtg
gatgtggattcgggaattgaaaacatggaagtggacgagaatgaccgacgggagaaaagg
agcctgagcgaaaaggagccttcgtcaggtcctgaagtgtccgaagagcaggccttacag
ctggtctgtaagatcttccgcgtctcctggaaggaccgggacagagatgtcatcttcctt
tcttctctttctgcgcagtttaaacagaacccaaaagaagtgttctctgattttaaggat
ctgattggccagattttaatggaagtactgatgatgtccactcagacacgagatgaaaat
ccgtttgccagtctgacagccacatctcagcctatttccacggcagctcggtcacctgac
agaaatctcatgctgaacactggctccaatccaggaacaagccccatgttctgcagcctg
ggctccttcggcgccagctcgttgtctagcctctatgaaactagccctgctcctgctgcc
agtttctggagctttgcaccagggctgagtccatccttggcctcaccttcccgtgcagcc
ccccaggttgctgtgcctcctgcatccccgagtcctcacagtgcagcccgccaggtggct
gtgcctgccacatccccgagtcctcacagtcctcacagtgcagcccgccaggtggctgtg
cctgccacatccccgagtcctcacagtgcagcccgccaggtggctgtgcctcccgcatcc
ccgagtcctcacagtgcagcccgccaggtggctgtgcctcccgcatccccaaatcctcac
agggcagcccgccgggtggctgtgcctcccacatccctcagtcctcacagtgcagcttct
ggaactgtggctggaagccaagcctcatccccaaggtatcgaccctacactctcatgcac
ccatgggggtcttcaccttgccccaccccacgaccctccattcaggctaactccccaggc
ttccctgcccgcccaagtagtccccgagcagtacctgtcagctcctccagacagagaccc
cgcagcaggggccccgccttcccacccggctcgcccagtgctgccagcagacgtccctcc
tccctgcggacctctcctagtttgggagcctctggtggagcaagtaactgggattcgtac
agtgatcatttcaccattgagacctgcaaggagacagacatgctgaactacctcatcgag
tgttttgaccgagttggaatagaggaaaaaaaagcaccaaagatgtgcagccagccagca
gtcagccagcttctgagcaacatccgctcgcagtgcatctcccacaccgcgctagtgctg
caaggttccctcacacagcccaggtccttgcagcagccgtccttcctcgtgccgtacatg
ctgtgcaggaacctcccctatggcttcattcaggagctggtgaggaccactcaccaggat
gaagaggtgttcaagcagatctttatccctgttttacaaggcctggctctggctgccaag
gagtgctctctcgacagtgactacttcaaataccccctcatggcgctaggtgaactctgt
gaaaccaagtttgggaagacacaccctgtgtgcagtttggtcgcctctttgcccctgtgg
ttgccgaagtctttaagccctggttctgggcgggagctgcagagactctcctacttaggg
gccttctttagcttctcggtctttgcagaggacgatgcaaaggtggttgagaaatacttc
tcagggcccaccattaccctggagaacacccgtgtcgtcagccagtcactacagcattat
ctggagctgggacggcaagagcttttcaagattctgcatagtgtgttgttaaatggcgaa
actcgtgaagcagctctcagttacatggcagccatcgtcaatgccaatatgaagaaagcc
cagatgcaggcagatgatcggttggtgtccacagacggctttatgctgaacctcctttgg
gtcctgcagcagctaagtacaaagatcaagttagaaacagtcgaccccacttacatattc
cacccgaaatgtcggattaatctcccgaacgatgagacacggataaatgcaacgatggag
gatgtgaatgagtggctggctgagctctatggagatcagcctccattttctgagccaaaa
ttccctacagaatgtttctttctcaccctgcacgctcaccacctctctattctgcctagt
tgtcgtcgctacattcgcagactgcgagctatccgagaactcaacagaactgtggaagat
ttgaaaagtaacgaaagccagtggaaagattccccactggcccccagacaccgagaaatg
ctgaagcgctgtaaaactcagcttaagaaactggtacggtgcaaggcctgtgctgacgct
ggcttacttgacgagagcttcctgagaagatgtctgaatttttatggccttctcattcag
ctgatgctgcgcatcctggaccctgcgtatcccgacgtaacactgcctttaagttcagat
gtccccaaggcgtttgcagcattgcctgagttttatatagaggatgttgctgaattttta
ttttttattgtacaatactcgccccaggtgctgtatgagccctgtactcaggacattgtg
atgttcctcgtcgtcatgctgtgcaaccagaactacatccgcaacccatacctagtggcc
aaactggtggaggtcatgtttatgaccaacccctctgttcagcctcgaactcagaagttt
tttgagatgattgagaaccatcctctctctaccaaattgctggtaccttccctcatgaaa
ttttatacagatgtcgagcataccggagccaccagcgagttctatgacaagttcaccatt
cgctatcacattagcactatttttaagagcctttggcaaaacatagctcaccatggcacc
ttcatggaggagttcaattctggaaagcagttcgtccgctacatcaatatgctgataaac
gacacgacctttctgctggacgagagtctggagtcgctgaagcggatccatgaagtgcaa
gaggagatgaagaacaaagagcagtgggaccagttgcctcgggatcagcaacaggcccgg
caatctcagctttctcaggatgagcgcgtttcacgatcttatctcgcgctggcgactgaa
accgtggacatgttccatctcctcactaagcaagtccagaagccgttcctcagaccagaa
cttggaccccgattagcagccatgctgaactttaacctccagcagctgtgtggccccaag
tgccgggacctgaaagttgaaaacccagagaagtacggttttgagccaaagaagctgttg
gaccaactgacggatatttacttgcagctggactgtgctcgctttgctaaagccattgct
gatgaccagcgatcctacagcaaagagctatttgaagaagtcatttcaaagatgcggaag
gcaggaatcaaatccaccattgcaatagagaagtttaagcttcttgctgagaaagtggag
gaaatagtggccaagaatgcacgggcagaaattgactacagcgatgcgccggatgagttt
agagaccctctgatggacaccctgatgaccgaccctgtgagactgccctctggcaccata
atggaccgctccattatcctgcggcatcttctgaactcccccactgaccccttcaaccgc
cagatgctgactgagaacatgctggaaccagtgccagagctgaaggagcagattcaagcc
tggatgagagagaagcagagcagtgaccactaa
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integrated database retrieval system
