Microtus oregoni (creeping vole): 121448458
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Entry
121448458 CDS
T08307
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121448458 (Frem1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
morg04091
]
121448458 (Frem1)
Lectins [BR:
morg04091
]
C-Type lectins
Lecticans
121448458 (Frem1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
121448458
NCBI-ProteinID:
XP_041508432
LinkDB
All DBs
Position
Unknown
AA seq
2168 aa
AA seq
DB search
MNSSACTGPRVLLFLLLRLLLLHLDLANSTFISINRGLRVMKGGSAFLSGDHLKFAVPKE
KDACRVEVVMNEPITQRVGKLTPQVFDCHFLPNEVQYAHNGCPILDEDSVKLRLYRFTET
DTFMETFLLRVHLVEPDCNIIRLSSNMLEVTEFYGLSQAIDKNVLQFDHDRTANLDCTIR
LDPVGTHLPAHGKLVLLNRKPEGPRGDQPHSFFSETQLKCPGGSCALGLQEVGSLRVSCE
EFLMMGLRYQHTRPPSPNVDYIAIQLDLTDRRSKTTYKSESAWLPVSIRVGIPNQAPRAA
FMALFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITKAPPQGYVTHLLDHTRAISSF
TWKDLNDMQVAYQPPNSSYPERRHYKLEVEVYDFFFERSAPITVHISIRTADTNAPRVSW
NTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLITIGGLQHGRLTVREGKGFLFTVADLQA
GVVRYHHDDSDSTKDFVAFRIFDGQHSSHHKFPINILPKDDSPPFLITNVVIELEEGQTI
LIQGSMLRASDVDSSDDYIYFNITRFPQAGEIMKKPGPGLVGYPVPGFLQRDLFSGIIYY
RHFGGEIFGDSFEFVLWDSHEPPNLSGPQVVTIHISPVADQLPKEAPGISRHLAVKETEV
AYITKKHLHFLDTESQDGELVYTVTRAPCFFFSPRHLDAGKLFMVDSIPKLTKNPTALGL
RSFTQHAVNHMKVAYMPPMQDIGPTPRHVQFTVSVRNQRGGTLHGICFNITILPVDNQVP
EVFTNTLRVAEGGQCTVSTENILVSDVDTPLDSICLSLRKMPLHGRVELNGFPLNPRDTF
SWKDLITLKVRYRHNGAEVFQDAIFMEVTDGTNSAEFVLHIEVFPVNDEPPVLKADLIPM
MHCSEGGEVTITPEYIFATDADSDDLKLLFLIAREPQHGLVRKAGIRVDRFSQGDVISGA
VTYKHTGGEIGLAPCFDTIILVVSDGEAGPLVNDCCYNGPDPSTPLPESFPMYELNITVH
PVDNQPPSVIIGRPLVVDEGFSGTLTTHHLTATDPDTAPDDLEFVLVSHPQFGYLENTLP
SAGFEKSNMGISIASFRWRDMKALHINYVQSRHLRVEPTADQFMVYATDGKGRSLETTFH
VVINPTNDEAPDFAVQNITVCEGQMTELDSSFITAADRDVPKDPLLFSIPRKPQHGLLID
MAISKESPQIKQEIHNFSMDLLKAGMKLAYVHDDSESLTDALVIQLSDGKHTILKTILVA
ITPVNDEKPTLSKKAEISMAAGDTRVLSSAVLSAIDKDSPRETIQYLFQRLPQNGQLQLK
IGRDWVPLSAGMQCTQEDVDLNLLRYTHTGKMDSQNGDSFAFYLWDGDNRSPVFDCLIII
EDSQKGDIVIHAKPLVVAKGDRGFLSTATLLAVDGADKPEELLYLITSPPQYGQVEYVHY
PGVPITSFSQMDIAGQTVCYIHKSRAAVPSDSFGFTISNGLQTQQGVFEITLETVDRALP
VVTRNKGLRLAEGTMGLLSTEHLQLTDPDTPPDSLTFLLVQLPRHGYLYLKGKVLHHNFT
QQDVDSRDVAYQHSGGGSQADGFTFLATDRKNQGFVVDGKVRKQPVLFTIQVDQLDKAAP
RITRLHSPSQVGLLKNGCYGIYITSHVLKASDPDTEDDQIIFKILRGPLHGRLENMTTGE
FIHERFSQKDLSSKTILYIINPSLQVNSDILEFQIMDPAGNTATPQSLELKWSFIEWFQT
EYEVCENVGLLPLEVTRRGYSMDSAFVGIEVNQVSAVVGKDFTVTPSKLIQFDPGMSTKM
WNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGRCHPSNSFNQSKHSA
WGKGSRQPLRPGSSSLTTAGSPRLERGPPPFLTKGDALQGFDPTDLSQRKMRTHGNGKSV
HPSSVCRNGTDTIYNYQGIVSLKLDGDDFSAHKRKAKLSVIRQPQKTIQVAELPLADKVE
SPAGSHYPRQGQLPSFPKNCSVVLKGLFHFEEGTHRLYLCDGTTWKAWSPQTKGLEDRSC
PAGWHLHSGYCHTLVTQRKGTWTTATRACREQYQGNLVTVFSRRHMQWLWDISGRKPFWI
GLKNQARTGRWEWIGGEPVAFTNWKRGPPQHPKPGKSCVLVHRRGQWQSKNCSKGKAHNF
VCSRKLQM
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttcagcttgtactggacccagagtcctgctgttcttactgctccggctgctt
ctgctgcatctggacctggccaactccaccttcatcagcatcaaccggggactgcgggtg
atgaagggcggctctgccttcctgtctggagatcatctgaagtttgccgtccccaaagag
aaggatgcctgtagagtggaggtggtgatgaatgaaccgataacccagagggttgggaaa
ctcacgccacaggtctttgattgccatttccttcccaacgaagtgcagtatgctcacaat
ggatgcccaattcttgatgaagattctgtgaagcttagactctacagatttactgaaaca
gacaccttcatggaaacctttctcttgcgagtccatcttgtggagccagactgtaacatc
atccgcctgagcagcaatatgctggaggtgactgaattctacggattgtcccaagccatt
gataagaacgtgctccagtttgaccatgataggacagccaacttggactgcaccatcaga
ctggacccagtggggactcatctgccagcccacggcaagctggttctgctgaatcgtaag
ccagagggacctcgtggagatcagccgcacagctttttttcagagacccagctgaagtgt
cccggtggaagctgtgccctgggcctgcaggaagtggggagtctgagagtgagttgtgag
gagtttctgatgatggggcttcgctaccaacacacacgccccccttcacccaacgtcgac
tatattgccatccagctggatctcacggacagaaggagtaaaaccacgtacaagtcagag
agtgcgtggctgcctgtcagcattagagtgggcattcctaaccaggcccccagggctgct
ttcatggccttgtttgttctggaggtggaccaattcattctgacccccctgacgacctca
gttctggactgtgaggaagatgagacccccaaacccttgttagtgttcaacatcactaag
gccccgccccagggctatgtgacccacctgctggaccataccagagccatctcttcgttc
acctggaaggatctaaatgacatgcaggttgcctatcagccaccgaacagcagttaccct
gagaggagacattacaagctggaggtggaggtatatgacttcttctttgagaggagcgcc
cccatcacggtccacatctccatcagaacagcggacacgaatgccccccgggtgtcctgg
aatacaggtctgaatctcctcgaggggcagtctcgggccatcacttgggagcagtttcag
attgttgacaacgatgacattggtgctgtgcagttgatcaccattggtggcctgcagcat
ggacggcttacagtaagagaggggaaaggatttctcttcactgtggccgaccttcaggct
ggagtcgttcgctatcatcacgatgacagtgactctaccaaagacttcgtggctttcaga
atatttgatggccaacacagcagccatcacaagtttcctatcaacatcttgcctaaagat
gacagtcccccattccttataaccaatgttgttattgaactagaagaggggcagaccatc
ttgatccaagggtccatgctgagagcttcagacgtggactccagtgatgactacatctac
tttaacatcacaaggttcccacaggctggggagatcatgaagaagccagggccaggactg
gtagggtatcctgtccctggcttccttcagagagacctgttcagtggaatcatttactat
cgtcactttggtggagaaatctttggagattcttttgaatttgtcctgtgggacagccat
gaacccccgaatctctcagggccacaggtggtgacgatccatatctctccagtagctgac
cagcttccaaaagaagctcccggcatttcccggcatttggctgtcaaggaaacggaggtg
gcctacatcactaagaagcacctacatttcctagatacggagtcacaggacggggagctc
gtctacacagtaacacgtgctccgtgtttcttcttcagccccagacacttggatgccggg
aagttattcatggtggacagcataccaaagctaaccaaaaaccctacagccctggggctg
cggtcatttactcagcatgctgtgaatcacatgaaagtggcctacatgccacccatgcaa
gatataggtcccacccctcgacatgtgcagttcacagtgtctgtcaggaaccagcgtgga
ggcaccttgcacggaatctgcttcaacatcacgattctcccagtggacaatcaggttcct
gaggtattcaccaacaccctgagagtggccgagggtggtcagtgcaccgtcagcacagag
aacattctggtttctgatgtggacactccactggacagcatctgcctctctcttcggaag
atgcctctccatggcagggtagagctgaatgggtttccccttaacccaagagacacattt
tcatggaaggacctcattaccttaaaagttaggtatcgccataacggagctgaggttttc
caggatgcgatattcatggaggtcacagatggcacaaactcagcagaatttgtcctgcac
attgaggtattccctgtgaacgatgagccacctgttctcaaggccgacctcatccccatg
atgcattgctcagagggtggagaagtgactatcacccctgagtacatttttgctactgat
gccgacagcgacgacttgaaactcttgtttctgattgcccgagaacctcagcatgggttg
gtgagaaaggctggaatccgcgtggacaggttctcccagggagatgtcatctcaggggct
gtaacgtacaaacacacaggtggcgagattggcctggcaccttgttttgacaccattata
ttggtggtttcggatggtgaggctggccctttggtgaatgactgttgctacaatggaccc
gatccatctactcctcttcctgagtcctttcccatgtacgagctcaacatcacggtgcat
cccgtcgacaaccagccgccttcagtcatcataggtaggccgctcgtggtggacgaaggc
ttctcgggaaccctcacgactcatcatttgacggccactgatccggacaccgcgccagat
gacttagaatttgttttggtgtcgcacccccagttcggctacctcgaaaacacactccct
tctgcaggttttgagaaaagtaacatgggcataagcatagcttcgttccggtggagagac
atgaaggctttgcacattaactacgtgcagtccaggcacctaagggtggaaccaactgcc
gatcagttcatggtgtacgccacagatgggaagggacgctccttagagacaacattccat
gttgtcatcaaccccacaaatgatgaagcgcctgactttgcggtacagaatatcactgtg
tgtgagggtcagatgacagagctggattcttccttcatcactgctgctgacagggatgtt
cccaaggaccccttactcttcagtatccctcgcaagccccagcatggcctcctcattgac
atggcgatcagcaaagagtctcctcagatcaaacaggaaattcacaacttctccatggac
cttctcaaggctggaatgaagctggcctatgtccatgacgattcagagagtctcactgat
gctcttgtgatccagttgtccgatgggaagcatacaatccttaaaaccattttagttgct
atcaccccagtgaacgatgagaaaccaacgctaagcaagaaggctgaaatctctatggct
gcgggcgatacgcgtgttctgtctagtgctgttctttccgccattgataaagactctccc
agggagaccattcagtatttattccaaaggcttccccaaaacgggcaacttcagcttaag
ataggaagggactgggtccctctctcagctggcatgcagtgcacccaggaggacgtagac
ctgaacttgctgagatacacacacactggcaagatggattcccagaatggagacagtttc
gccttctacctctgggatggggacaacagatcacctgtgtttgactgtctcatcatcatc
gaagattcacaaaaaggtgatattgtgattcatgcaaagccactcgtggtagccaaaggt
gacagaggtttcttgtcgactgccactctcctggctgtggatggagcagacaagcccgag
gaactactctacctcatcacgtccccaccgcagtatggccaggtggagtacgtccactat
cccggagtccccatcaccagctttagccaaatggacatagcaggacagacagtctgctac
atacacaagagccgggcggcagtccccagtgacagcttcggatttaccatcagcaacgga
ctgcagacccagcagggggtatttgagatcacactggagactgtggacagggccttgcct
gtggtgaccaggaacaaggggctgaggctggcagaagggacgatgggcctcctgtccact
gagcacctccagctgaccgaccccgacacccctccagacagcctaaccttccttctggtc
cagctcccccgccacgggtacctctacctgaaggggaaagtccttcaccataactttacc
cagcaagatgtggacagcagggatgtggcctatcagcactccggaggcggctcccaggct
gacggcttcactttcctggccacagacaggaagaaccaaggcttcgttgtggatgggaag
gtgcggaaacagcccgttctcttcaccatccaggtggaccaactggacaaagcagcaccc
cggatcacacgcctgcactccccttctcaagtggggctcttgaaaaatggctgttacggc
atttacatcacctcccatgtgctgaaggcgtcggaccctgacacagaggatgaccagatc
atttttaagattttaaggggcccactgcacggacgtctggagaacatgaccacaggtgaa
tttatccatgagcgatttagccagaaggacttaagcagcaagaccattctttacatcata
aacccatctctgcaagtgaattcagatatcctggaatttcagatcatggaccccgcaggg
aacactgccacccctcaaagcttggagctgaagtggtcttttattgaatggttccagact
gaatacgaggtctgtgagaatgtgggcttgttacccttggaagttaccagaaggggctat
tccatggattctgcctttgtgggcatagaggtcaaccaagtgtcagctgtagttggaaaa
gattttactgtcacgccttccaaactgatccagtttgacccaggaatgtcaactaagatg
tggaatatagcaattacctatgacggattagaggaagatgatgaggtctttgaagtaatt
ctgaactcccctgtgaatgccgttcttggcacaaagacaaaagctgcagtgaaaattttg
gactcaaaaggaggacggtgccatccttcaaattccttcaaccaaagcaagcacagcgca
tgggggaagggcagcagacagccgctgcgcccagggtcatcctcactcaccaccgctggc
tctcctcgtctggaaagagggcctcctccatttctcaccaaaggagatgcccttcagggc
tttgatcccacagacctctctcagaggaagatgaggacccatgggaatggcaaatcagtc
cacccttcctccgtttgtagaaatggaacagacaccatctacaattatcaaggcatagtt
tccttgaaactagacggtgacgatttctctgctcacaaacgaaaggccaagctatccgtc
attaggcagccacagaagacaatccaggtggcagaactgcctctagctgataaggtggaa
tccccagccggctcacactaccccagacagggtcagctgccctcgtttccaaagaattgc
tctgtggtgttaaagggactatttcattttgaagaaggtacccacagattgtatctatgt
gatgggaccacctggaaagcctggagcccccaaaccaagggcctggaggacagatcctgc
ccagctggatggcatcttcactcaggctattgccacaccttggtcacacagaggaaaggc
acctggaccactgctacccgagcttgcagagaacagtatcagggcaaccttgtgaccgtc
ttctcccggaggcatatgcagtggttatgggatatcagtggacgaaagcccttttggata
ggtttgaagaaccaagcccgcactggccgctgggagtggattggaggtgaacctgttgct
ttcaccaactggaagagaggaccccctcagcacccaaagcctgggaagagctgtgttttg
gttcacagaagaggacaatggcaatcaaagaactgtagtaaaggcaaggcccacaatttt
gtatgctcaaggaaactccaaatgtaa
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integrated database retrieval system
