KEGG   Microtus oregoni (creeping vole): 121448520
Entry
121448520         CDS       T08307                                 
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03013  Nucleocytoplasmic transport
morg05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121448520 (Ndc1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    121448520 (Ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:morg03019]
    121448520 (Ndc1)
Messenger RNA biogenesis [BR:morg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121448520 (Ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 121448520
NCBI-ProteinID: XP_041508528
LinkDB
Position
Unknown
AA seq 672 aa
MATAPSGPCVGGARDILWRVLGWRIVRSIIWSVLLLPVCTTAFIIFSSVDVFHPIQWLSD
SFNDLCSSRVIFYLLLLSVVIIIISILNVEFYTVVPTIPSSRLALIGRILHPQQLMHSFI
HAAMGMVVAWCAAIISKGQYSFLVVPCTVTESLDSPAAQTCMNEHHLFFLLAGAFMGYSY
SLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLIKHSCVESLFVVRNFCIVYYFFGHIPKA
WISTAMDLHIDEQAHRPLDTIGGLLNVSLLYHVWLCGVFLLMTWYISWILFKIYATEAYV
FPVQPPFAEESDDCLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLSLLNDMTQKLVLYQEAAATNGRMSSSYSVEPKKLTSPEETTFQTPKSSQM
PSVPPLVKTSLFSPKLSTPDASNPFGTPFGSSVVNRMAGIFDVNTCYGSPQGPQLIRRGP
RLWTHASDQQMSDFSNPSPCTSVTAERKTVRQPSVVYSWIQNKREQIKNFLSKRVLIMYF
FSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAV
DKYFKLPHASSKPPRISGSLVDSSYKTLRFAFRASLKTAIYRIATTFGDHLNAVQASAEH
QKRLQQFLEFKE
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggccacggctccgagtgggccctgcgtcggcggggcgcgggacatcctttggcgggtt
ttgggttggaggatagttagaagtatcatttggtcggtgttgcttctgcccgtctgtacc
acagcctttataatcttcagcagcgttgatgtgttccatcctatacagtggctgtcagat
tcgttcaatgacttatgtagttcccgtgtcatcttctacctcctgctgctgtcagtggta
attataataataagtattttaaatgtggagttctatacagttgtgcccaccatccccagc
tcccgactggccctgatagggaggatccttcaccctcagcagctcatgcactccttcatc
catgctgccatgggaatggtggtggcgtggtgtgcggccatcatctccaagggccagtac
agttttctcgtggttccctgtactgtgactgagagcttagatagccctgctgcccaaacc
tgcatgaatgaacatcacctgtttttcctcctggctggagcattcatgggctatagctac
agtcttctgtatttcattaacaacatgaattatctcccgtttcccattatacagcagtat
aaatttttgcgcttcagaagatcgcttctcttactaattaaacatagctgtgtggagtcc
ctgtttgtggtcagaaatttctgcattgtgtattatttttttggccatattcccaaagct
tggattagcaccgctatggaccttcacatagatgagcaggctcacaggcctcttgacacg
ataggcggcctccttaatgtctcgttactctaccatgtttggctctgtggtgtcttcctc
ttgatgacttggtacatctcatggatactcttcaaaatctatgccacagaggcttatgtg
ttccctgttcagcctccatttgcagaggaatcggatgactgcctcccgaaagtcctgaac
agcagtcctcctctcatcataaagtatttggccttacaagacctgatgttactttctcaa
tattctccttctcgaaggcaagaagtttttagcctcagtcaaccaggtggacatcctcat
aactggactgccatttcgagggagtgtttgagtctattaaatgatatgactcagaagctg
gttctctaccaagaggctgctgctacaaatgggaggatgtcttcatcatactcagtggag
cccaagaaactgacttccccagaagaaaccacttttcagacaccaaaatctagccagatg
ccttcagtgccaccgttagttaaaacatcactgttttctccaaaattatccacgcccgat
gcttcaaatccttttggaaccccatttggctccagtgtagtgaaccgaatggctggaatc
tttgatgtgaacacctgctatgggtctccccaaggtcctcagctgataagaagagggccg
cggttgtggactcacgcttctgatcagcaaatgtctgacttttctaatccttctccttgt
acctctgtcactgctgagcgtaagacagtgagacagcccagtgtggtttactcatggatt
cagaacaaacgtgaacagattaagaatttcttgtcaaaacgggtgctgataatgtatttt
tttagcaagcacccagaggcctccattcaggctgttttttcagatgcccaaatgcatatt
tgggctttggaaggtctgtctcacttagtagcagcatcttttacagaagatagatttgga
gttgttcagaccacacttccagctatccttaatactttgttgaccctgcaggaggctgtc
gacaagtacttcaagctgcctcatgcttctagtaaaccaccccgaatttcaggaagcctt
gtggactcctcctacaaaacattaagatttgccttcagggcctcactgaaaactgctatc
taccgcatagctacaacgtttggtgaccatctgaatgctgtgcaagcatctgcagaacat
cagaaaagacttcaacagttcttggagttcaaagaatag

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