Microtus oregoni (creeping vole): 121448869
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Entry
121448869 CDS
T08307
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03013
Nucleocytoplasmic transport
morg03015
mRNA surveillance pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121448869
09122 Translation
03013 Nucleocytoplasmic transport
121448869
03015 mRNA surveillance pathway
121448869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121448869
03041 Spliceosome [BR:
morg03041
]
121448869
03009 Ribosome biogenesis [BR:
morg03009
]
121448869
03012 Translation factors [BR:
morg03012
]
121448869
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121448869
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121448869
mRNA cycle factors
Stress granule specific factors
121448869
Spliceosome [BR:
morg03041
]
Complex C
Other components
EJC/TREX
121448869
Ribosome biogenesis [BR:
morg03009
]
Eukaryotic type
90S particles
Helicases
121448869
Translation factors [BR:
morg03012
]
Eukaryotic type
Initiation factors
eIF-4
121448869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Cas3-like_C_2
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
121448869
NCBI-ProteinID:
XP_041509062
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAMSGSTRKRLLKEEDMTKVEFESSEEVDVTPTFDTMGLREDLLRGLYAYGFEKPSAIQQ
RAMKQIIKGRDVIAQSQSGTGKTATFSISILQCLDIQVRETQALILAPTRELAVQIQKGL
LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL
DEADEMLNRGFKEQIYDVYRHLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTVTQAVIFCNTKRKVDWLTEKMREANFTVSS
THGDMPQKERESIVKEFCSGASRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIG
RSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcgggctccacgcggaagcggctgctcaaagaggaggacatgaccaaagtg
gagttcgagagcagcgaggaggtggacgtgacccccacgttcgacaccatgggcctgcgg
gaggacctactgcgcggcctgtacgcctacggctttgagaagccttcagcaatccagcag
cgcgctatgaagcagataattaaggggagagatgtcatagcacagtctcagtctggcacc
ggcaagacggccaccttcagcatttcaatcctccagtgcttggatatccaggttcgagaa
acccaggctttgatcttggctccaacaagagagttagctgtacagattcagaagggtttg
ctggctctgggggactacatgaacgtacagtgccacgcctgcattgggggcaccaatgtt
ggggaggacatccggaagctggactatgggcaacatgttgtggcaggcaccccgggacgt
gtctttgatatgattcgccgtagaagtttaaggacacgggctatcaagatgttggttttg
gatgaggctgatgaaatgctgaacagaggtttcaaggagcagatctacgatgtgtacagg
cacctgccgccagccacacaggtggttctcatcagtgccacattgcctcacgagatcctg
gagatgaccaacaagtttatgaccgaccccatccgcatcttggtgaagcgtgatgaattg
actctggaaggcatcaagcagttcttcgtggcggtggaaagagaggagtggaaatttgac
accctgtgtgacctttacgacacgctgaccgtcacccaggctgtcatcttctgcaacacc
aagaggaaggttgactggctgacagagaagatgagagaagccaacttcactgtgtcatcc
acgcacggggacatgccccagaaggagcgcgagtccatcgtgaaggagttctgctctggt
gccagccgagtgctcatttctacagatgtctgggctcgcggcctggatgtccctcaggtg
tccctcgtcattaactacgacctgcccaacaacagagaactgtacatccacagaatcggg
agatcagggcgatacggccgcaaaggtgtggccatcaattttgtgaagaatgatgacatc
cgcatcctcagggacatagaacagtactactccacccagatagacgagatgcccatgaat
gtggctgacctgatctga
DBGET
integrated database retrieval system
