Microtus oregoni (creeping vole): 121449294
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Entry
121449294 CDS
T08307
Symbol
Ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03022
Basal transcription factors
morg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121449294 (Ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
121449294 (Ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
morg03021
]
121449294 (Ercc2)
03036 Chromosome and associated proteins [BR:
morg03036
]
121449294 (Ercc2)
03400 DNA repair and recombination proteins [BR:
morg03400
]
121449294 (Ercc2)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121449294 (Ercc2)
Transcription machinery [BR:
morg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121449294 (Ercc2)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121449294 (Ercc2)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121449294 (Ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
121449294
NCBI-ProteinID:
XP_041509532
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ
RAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDTHGRQVPLSAGIYNLDDL
KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEETLQRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacggactgctggtctacttcccgtacgactacatctacccggag
cagttctcctacatgctggagctgaagcgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggcaccgggaagacagtatccctgctggcgctgatagtggcttaccag
agagcttttccactggaggtgaccaaacttatctactgctcacggactgtgccagagatt
gagaaggtcatagaagagcttcgcaagctgctcagtttctatgagcagcaggagggggag
aagctgccgttcttaggactggctctgagctcgagaaagaacctgtgcattcatcccgag
gtgacaccactgcgctttgggaaggacgtggatggcaagtgtcacagcctcacagcctcg
tacgtgcgtgcgcaatatcagcaggatgccagcctgcctcactgccgcttctatgaggaa
tttgacacccatggacgtcaggtgcccctttctgcgggcatctacaacctggatgacctg
aaggctctagggcagcggcagggctggtgcccctacttcctggctcgatactcgatcctg
catgccaacgtggtggtttacagctaccactacctcctggaccccaagattgcggacctg
gtgtccaaagagctggctcgcaaggccgtagtggtcttcgatgaagcccacaacattgac
aatgtctgcattgattccatgagtgtcaatctcacccgcagaactctggaccgctgccag
agcaacctagacaccctgcagaaaaccgtgctcaggatcaaggagacagatgagcagcgg
ctgcgggacgagtaccggcgcctggtggaggggctgcgggaggccagtgtagcacgggag
acagatgcccacttagccaaccctgtgctgcccgacgaggtgctgcaggaggcagtgcca
ggctccatccgcactgccgagcacttcctgggcttcctgcggcggctgctggagtacgtc
aaatggcggctgcgcgtacagcatgtggtgcaggagagtccacccgccttcctgagcggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcaggttctgtgctgagcgcctgcgg
tccctgctgcacaccttggagattgctgacctggccgacttctccccgctcacactcctt
gctaacttcgccactcttgtcagcacttatgccaagggctttaccattatcatcgagccc
tttgacgacaggacccctaccatcgccaaccccatcctgcacttcagttgtatggacgcc
tccttggccatcaagcctgtatttgaacgcttccagtctgtcatcatcacctctgggaca
ctgtccccactggacatctaccccaagatcctggacttccaccctgtcacaatggcaacc
ttcaccatgacgctggcccgagtctgcctctgcccgatgatcattggccgtggtaatgac
caggtggctatcagctccaaatttgagaccagggaagatattgctgtaatccgcaactat
ggcaacctgctgctggaaatgtctgctgtggtccctgatggcattgtggccttctttacc
agctaccaatacatggaaagcactgtggcctcctggtatgagcagggcatccttgagaac
atccagaggaacaagctgctcttcattgagacccaggacggggcggagaccagtgtggcc
ctggagaagtaccaggaggcgtgcgagaacggccgtggggccattctgctctcagtggct
cggggcaaagtgtcagaagggattgactttgtgcatcactatgggcgggctgtcatcatg
tttggagtcccctatgtctacacccagagccgaattctcaaggcccgactagagtacctg
cgggaccagttccagatccgtgagaatgactttctcacctttgatgccatgcgccatgca
gcccagtgtgtgggtcgtgccatcaggggcaagacagactacggtctcatggtctttgct
gacaagcggtttgctcgggccgacaagcgtggcaagctgcctcgatggatccaggagcac
ctgactgactccaacctcaatctgacggtggacgagggtgtgcaggtcgccaagtacttc
ctgcggcagatggcacagcccttccacagggaagatcagctgggcctgtcactgctcagt
ctggagcagctgcagtcagaggagacactacagcggatcgaacagatcgcgcagcagctc
tga
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integrated database retrieval system
