Microtus oregoni (creeping vole): 121449346 Help Entry 121449346         CDS       T08307                                  Symbol Sympk Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism morg  Microtus oregoni (creeping vole) Pathway morg03015   mRNA surveillance pathway morg04530   Tight junction Brite KEGG Orthology (KO) [BR:morg00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     121449346 (Sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     121449346 (Sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:morg03021]     121449346 (Sympk)    03019 Messenger RNA biogenesis [BR:morg03019]     121449346 (Sympk) Transcription machinery [BR:morg03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      121449346 (Sympk) Messenger RNA biogenesis [BR:morg03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      121449346 (Sympk)     U7-dependent histone pre-mRNA processing factors      121449346 (Sympk) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 CRM1_C INTS7_N Motif Other DBs NCBI-GeneID:  121449346 NCBI-ProteinID:  XP_041509621 LinkDB All DBs Position Unknown AA seq 1278 aa AA seqDB search MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD ENVNVVKKAILTMTQLYKVALQWMVKSRVINDLQEACWDMVSSMAGEIILLLDSDNDGIR THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDSRKRPRDDADSTLKKM KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK VVKPESVLIKRRLSVQGQAISVVGSLNTMSPLEEEVPQAKRRPEPIIPVTQPRLAGAGGR KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL KSEVLSFILEDVRGRLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK DGVFTKVVLEAPLITESALEVIRKYCEDESRAYLGMSTLGDLIFKRPSRQFQYLHVLLDL SSHEKDRVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL ARLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFDKCPELREPLLAHVR SFTPHQQAHIPNSIMTILEASGKQEPEVKEAPAGPLEEDDLEPLALALGPAPAPAPRPPQ DLIGLRLAQEKALKRQLEEEQKLKPTGVGAPAASASSMPAVVPAARTGPTPTEEAMEYRE EGPECETPAIFISMDDDSGLAETTLLDSSLEGPLPKEAAAVGPSSKDERSPQSLNHAVEE SLTTSSPEARETESKGNS NT seq 3837 nt NT seq  +upstreamnt  +downstreamnt atggcaagtggcagcggggacagtgtcacccgccggagtgtggcatcgcagtttttcaca caagaggaaggaccaggcattgatggcatgaccacttctgagagggtggtagatcttcta aaccaggcagcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggag ctgatcatcaacaaagaccccaccctgcttgacaactttctggatgagatcatcgctttc caagcagacaagtccattgaagtgcgcaagtttgtcattggcttcattgaggaggcatgc aagcgggacattgaactgctactaaaactgattgccaacctcaacatgctcctgcgggat gaaaacgtgaatgtggtaaagaaagccatcctcaccatgacccagctctacaaggtggcc ttgcagtggatggtgaagtctcgggtcatcaacgatctccaggaggcctgctgggacatg gtatcctccatggctggagaaatcatcctgctattggattctgacaatgacggcatccgt acacatgccatcaagtttgtggagggcctcattgtcaccctatcaccgcgcatggctgat tcagaggtaccccgacgccaagaacatgacatcagtctggaccgaatcccccgagatcac ccctacatccagtacaatgtcctgtgggaagaaggcaaggcggccttggagcaactgttg aagttcatggtgcaccctgccatctcctccatcaacctgaccacagccctgggctccctt gccaacatcgcccgccagagacccatgttcatgtccgaggtgatccaggcatatgagact ctgcatgccaacctgcccccaacactggccaagtcccaggtgagcagcgtgcgtaaaaac ctcaagctgcacttgctgagtgtgctcaagcaccctgcctccttggagttccaggcccag atcaccaccctgctggtggacctgggcaccccccaggcagagatcgcccgcaatatgccc agcagcaaggactcccgcaaacggccccgggatgatgctgactccacgctgaagaaaatg aaactggagcccaacttgggagaagatgatgaagacaaagacttggagcctggcccatca gggacttcgaaggcctcagcccagatctcaggccagtcagacacggacatcactgctgag ttcttgcagcctctcctgacgcctgacaatgtagccaatctggttctcatcagcatggtg tacctgcctgagaccatgcctgcctccttccaagccatctacaccccagtggagtcagca ggcaccgaagcccagatcaagcaccttgctcggctcatggccacacagatgacagctgca ggactgggtcctggtgtggagcagacaaaacagtgtaaggaagagcctaaggaggagaag gtggtgaagcctgagagcgttttgatcaagcgtcgtctgtcagtgcagggccaggccatc tctgtggtgggctctctgaacaccatgtcccccttggaggaggaggtaccccaggccaag aggaggccggaacccatcatccctgtcacacagccacggctggcaggcgctggtgggcgc aagaagatctttcgtctgagtgacgtgctaaagcccctgacggatgcccaggtggaagcc atgaagctgggcgctgtgaagcggatcctgagggctgagaaggctgtagcctgcagtggg gctgcccaggtgcgtatcaagatcctggccagcctcgtaacacagttcgactctggcctc aagtcagaggtgctgtccttcatcctggaagatgtccggggtcgcctggacctggctttc gcctggctctaccaggagtacaatgcctaccttgcagcaggggcctcaggcactctggac aagtatgaggactgcctcatccgcctgctctctggcctgcaggagaaaccggaccagaag gatggggtcttcaccaaggtggttttggaggccccactgatcaccgagagtgctttggag gtgatacggaagtattgtgaggatgagagtcgtgcctacctgggcatgtcgacacttgga gacctgatcttcaagcgaccttctcgccagttccagtacctgcatgttctccttgacctc agctctcatgagaaggacagggtgcgctcccaggccctactcttcattaagcgcatgtat gagaaggaacagcttcgagagtatgtggaaaaattcgccctcaactacctgcaactcctg gtgcaccccaacccgccctcagtgctcttcggagctgacaaggacacagaggtggccgcg ccctggaccgaggagacagtgaagcagtgtctttatctctatctggctctcctgcctcag aaccacaagctgatccacgagctggcagccgtgtacactgaggccatcgccgacatcaag cggacagtgctgagggtcattgagcagccgatccgagggatgggcatgaactcaccagag ctgctactgctagtggaaaactgtcccaagggggcagagacgctggtcacccgttgcctg cacagccttacggacaaagtaccgccatccccagagctggtgaagcgggtccgagacctg taccacaagcggctgcctgatgtgcgcttcctcatccctgtgctcaatgggctggagaag aaagaggtgatccaggccctgcccaagctcatcaaactcaaccccattgtggtgaaggag gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg aatccgggagagctgctgattgcactgcacaacattgactctgtgaagtgtgacatgaaa tccatcatcaaagccaccaacctgtgctttgcggagcggaatgtgtacacatcggaggtg ctagctgtggtgatgcagcagctgatggagcaaagccccctgcccatgctgctcatgcgg accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg gcccgactcatcatgaagcaggtgtggaagtaccccaaggtatgggagggcttcatcaag tgctgccagcgcaccaagccgcagagcttccaggtcatcctgcagctacctccgcagcag cttagcgcggtctttgacaagtgcccagaactccgggagccgctgttggcccacgtgcgc tccttcactccccaccagcaagcacacatccccaactccatcatgaccatcctggaggca agcggcaagcaggaacccgaagtcaaggaagcacctgcagggcccctggaagaggatgac ctagagcccttggctctggctctgggcccagccccggcccctgctccgcggccccctcag gacctcatcggcctgcgattggctcaggagaaggccctgaagcggcagctggaggaggag cagaagctgaagcccacaggtgtaggagcacctgctgcctcagcatcttccatgcccgcg gtggtgccggcagcccgaactggtcccacccctactgaggaggccatggaataccgggag gagggtcctgaatgcgagaccccggccatcttcatcagcatggacgacgactcagggctg gccgaaactacgctcttggactctagtcttgagggtcccctgcctaaggaggcagcagca gtcggaccgagctccaaggatgagcgaagcccccagagcctcaaccacgcagtggaggaa tccttgacgacctccagcccagaggccagggaaaccgagagcaaggggaacagctga

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