KEGG   Microtus oregoni (creeping vole): 121449968
Entry
121449968         CDS       T08307                                 
Symbol
Cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121449968 (Cdc40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:morg03041]
    121449968 (Cdc40)
Spliceosome [BR:morg03041]
 Complex C
  Other components
   Step II factors
    121449968 (Cdc40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 121449968
NCBI-ProteinID: XP_041510553
LinkDB
Position
Unknown
AA seq 579 aa
MSTAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLTVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDSHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtccactgcgattgctgctctagctgcttcgtacggttcgggttcagggtccgaatcg
gactcggacagtgagggcagtcggtgtccgctgccagccgccgactctctcatgcacttg
accaaatcaccttcagcaaagccctctctgacagtggcggtggactcggctccggaggtg
gcggttaaggaagatttggaaactggagttcaccttgaccctgctgtcaaagaagttcag
tataatcctacctatgagaccatgtttgctcccgagtttggaccagaaaatccctttaga
acacagcaaatggctgctcctagaaatatgctttctggatatgccgagccggcgcatatc
aatgacttcatgtttgaacagcagagaagaacgtttgctacatacggctacgcactggac
ccttcactggatagccaccaagtgtctgctaaatacatcgggtctgtagaagaagctgaa
aagaatcaaggtctaactgtatttgaaactggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaacattgatggtttcttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtggccaaaccttcagaagaagaacaaaaggaattggatgaaatcaca
gcgaagaggcagaagaaaggcaaacaggaagaggagaaacctggggaggagaagacaatc
ttacatgtcaaagaaatgtatgactatcaaggcaggtcctaccttcacatacctcaggat
gttggtgttaatctacggtcgtctgtgccacctgaaaaatgttaccttcccaaaaaacaa
attcacgtgtggtctggacacacaaagggtgtcagtgcggtcaggctgtttcctctttct
ggacatttgttgctgtcttgctccatggactgtaaaattaagctatgggaagtttatgga
gaccggcgctgtctaagaacatttatcggtcacagtaaggctgtgagagacatctgcttc
aacaccgcaggcacccagttcctcagcgcggcctatgaccggtacctgaagctctgggac
accgagacggggcagtgtatatcaagatttacaaaccgaaaagtaccctattgtgtcaag
ttcaatcctgatgaagacaagcaaaatctctttgtagctgggatgtctgacaaaaagatc
gtgcagtgggacatccgcagcggagagattgtccaggagtatgaccggcatttgggagct
gtcaacaccattgtgtttgttgatgagaatcgaagatttgtgagtacatctgacgataag
agcctaagagtttgggaatgggatatccctgtggattttaagtacatagcagagcccagc
atgcactcaatgcctgcagtgactttgtctccaaatgggaaatggctcgcatgccagtca
atggataaccaaatcttaatttttggagcccagaacagattcagattaaataagaagaaa
attttcaaaggtcacatggtagcaggctacgcttgtcaggtcgacttctcgccggacatg
agctatgtgatttcaggagacggaaatggaaaactaaacatttgggactggaagaccaca
aaactctacagtcggtttaaagcccacgataaagtgtgcataggtgcggtgtggcacccc
catgagacgtccaaggtcatcacgtgtggctgggatggcctcatcaaactgtgggactaa

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