Microtus oregoni (creeping vole): 121451542
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Entry
121451542 CDS
T08307
Symbol
Shoc1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
morg03036
]
121451542 (Shoc1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121451542 (Shoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
121451542
NCBI-ProteinID:
XP_041513104
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MFSAFKYYAIDYLHENTVKERICRDALLLPIPPCLNQDKNVIDDEYRSPWTRAASYPEVT
DDSVLEQWTTRFCVEDFPEKKTVTGMIINGTFEEIVPSSNPNSPTGIEDVSSSLSKDHRE
DFTSIKCSPHYPGVKAEHQGLLIDEELIFINKAVDDYLPTVDTILSRLKLYRVKDPLLDF
KEQLRGKDQFMECFSVQEQLEPSVRDFHMAEETFCKKKLPSVFPYEFEFLISTIPTQEIP
TLLLSELKESLNSIPEIMDHEDENEKPFKRDLSTKHESDAEDMEYSSTEILPTESPSELE
GSEAGELEMPLTNLSLPRQHSPVSSLCAGFQTFPFSAVCKIDLLSAGESANKYCMLWPLG
SCRNSWVSFMLTVPRFEEPSSQYSLADMRNIFSIKGDSLVINPAKTKGWRQARRNPIMAE
TLEHLKAYLCHSGLSSKEAKLEIFLPTKVLQLEPWLEHQSCPLPIMPVSEKSASVRRLHP
QKRPSPENEVLHQMQSEECVSAKKTKKEENPKSDQELAARTVQKTDNSHVGLADSGPSVE
SASSSQIKASYYKKQHDLDLLSEFITLRSKYKPFTSDAEVTDHDQNSEFQDKEKCSLTLQ
EESPVVSNNRTAEERSQERADDVIEIQASDTQCQAYCLLEAAATPVLKKLVCLCTYPAAN
WKFATVIFDQTRFFLKEQEKLVNDAVHQGENADREITFRHAALLHLLVTMRDVLLTCSLD
TALGYLSNAKDIYKSMLDSCLDNIWRQLKILQFIKEKRPKTNYKIKELQCQILSRLQSQQ
QIKVLIIIRMDSNGEKHLLIKTLKKIEGLTVTVLHSNERKKFLKTIGVIKGTSSCVVVHN
HHIRADFPWSSFSLVLEYNHVGHSCWAKHCQQLNIPFLAFKVVLPDTALKRVTLLDRFGG
FLLDIQVPYVFFASEGLLNIPEILRLLESGYNITLVERSCCESLKLFGSAERYVVITVDE
HTAVVVQDLEELYYEKASDNIIMRLMVLSFQYSCCWIILYPKETLNSEYHLTPKTLHHLA
QIYAALVSSGLKSEELDVKLIIAPGVEETALTIRQIADHNLMASKRDPHEWLDKSWVEVS
PSKEEMHLLDFPCINPLVAQLMLHRAPSLHWLLIASPAELQELLPQVPVKVLKHFCSITS
LFKISSSSMTKSPRISSLQEDMNQTRPFISQSSAPVIQEHDEYYSYEDPEEMVQEGTSAP
FMELRESICRPPSAASHRQAGSWNTAWNNPFLSHKDPKKASWHSFPNQGDSESGVFSLGL
THINYEPEMLPTDTQRRITHNFVNYPRAKGSRSMQASSPMFLPEDSPSHLYWDFKKNTDQ
KQMYSFRSSCGTEQTTYNKWCPQEDDLTSDQPECLSAELEDLTHRHSNAGTDQTFWREQP
SAPSWDSVYASDSNVNQRGFHGLDFYHRAGNYSGQRRLPVSSSNWKDYETPTGLMYSQVP
QPKKRRLMYEKVPGRMDGQTRLRFL
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgttttcggcattcaaatattatgcaatcgactatttacacgagaacacagttaaagaa
aggatttgcagagatgctttattgcttccgatccctccgtgtttaaatcaagataaaaac
gttattgatgatgaatatagaagtccatggacaagagctgcttcatatccggaggtgaca
gatgattcagtcttggaacagtggacaacaaggttctgtgtggaggattttcctgagaaa
aagacagttacaggaatgataattaacggtacgtttgaggaaattgttcccagttccaat
ccaaactctccaactggaatagaggatgtcagctcatccctcagtaaggaccacagagaa
gactttacatctatcaagtgctccccacactacccgggagtgaaagccgagcaccaagga
ttacttattgatgaggaattgatttttataaataaggcagtggacgattatctaccaact
gtggatactatcttgagcagactgaagctctatcgggttaaggatccgcttttagatttc
aaagaacagctccgtggaaaggatcagttcatggagtgtttctctgttcaagaacagttg
gaaccttctgtaagagatttccatatggctgaggagaccttttgtaagaagaaactacca
tcagtttttccttatgagtttgaattcttaatatctacaatccccacacaagaaattccc
actctattactatcagaactgaaggaatcattaaactcaatacctgaaataatggatcat
gaagatgaaaatgaaaaacctttcaaaagagatctttctaccaagcatgagtctgatgct
gaggatatggaatacagctccacagagatcttacccactgaaagcccatctgagctggag
ggcagcgaagctggagaattggaaatgccactaaccaatttaagcttaccaaggcaacat
tctccagtgagttcactatgtgcaggatttcagacatttccattttctgctgtgtgcaaa
attgatttgcttagtgctggagaatcggctaataaatactgtatgctgtggcccttggga
agctgcaggaactcttgggtctcattcatgcttacagttccaagatttgaagagcccagc
agtcaatattctcttgcagatatgaggaatatcttttctatcaaaggagacagccttgtg
attaaccctgcaaaaacaaagggttggagacaagcaagacgaaatccaataatggccgaa
actttggagcatctgaaggcatatttgtgtcacagtggtctgtcttctaaggaggctaag
ctggagatctttctgcctacaaaagtgcttcagctggagccctggctagaacatcagagt
tgccccttgcccatcatgcctgtgagtgagaagtctgctagtgtccgcagattacatcct
caaaagagaccgtctcctgagaatgaagtgctgcatcagatgcagtctgaggaatgcgtc
tctgctaaaaaaacaaaaaaggaagaaaatcccaagagtgaccaagagctagctgctaga
acagtgcagaagacagacaacagccacgttggacttgctgactctgggccctctgttgag
tcagcttcctcttcacagatcaaggcatcttactataaaaagcagcacgacttggacctt
ttgagcgagttcattactctgagaagtaaatacaagcctttcacttcagatgctgaagtc
acagaccatgaccaaaacagtgaatttcaagataaagaaaagtgttctttaactcttcaa
gaagaaagtcccgttgtttctaataacagaactgcagaggaaagaagtcaggagagagca
gatgatgtcattgagattcaagcatcagacacccagtgccaagcatactgcctcctagaa
gcagcagcgactcctgtcttaaagaagcttgtttgcctctgcacttaccctgctgctaat
tggaaatttgccactgtcatttttgaccaaacaagattcttcttaaaggaacaagaaaaa
ctagtaaatgatgctgttcaccaaggtgaaaatgctgacagagaaataacattcaggcat
gctgctctcttacatctcctggtgacaatgagagatgtccttttaacatgcagcttggat
acagcattaggatatttgtcaaatgcaaaggatatctacaaaagcatgttagactcctgc
ttggataacatttggagacagctgaaaattttacagtttattaaggagaaaaggcctaaa
accaactataagatcaaagaattgcaatgtcagatactaagcaggttgcaaagtcaacaa
cagattaaggtacttattataataagaatggactcaaatggagaaaagcatttgcttatt
aagacccttaagaaaatagaaggtttaacagtgactgttttacattcaaatgagagaaaa
aaatttctgaaaactatcggtgttatcaaaggcacgagttcctgtgtggtggtgcataac
caccatatcagagcagatttcccctggagcagcttctcccttgtgctggagtacaatcac
gtgggccactcttgctgggccaagcactgccagcagttgaatataccgttcctggccttt
aaagtcgtccttccagacacagcgctgaagagagtcaccttgctggatagatttggaggg
tttctcttggacattcaggtgccatacgtattttttgcatctgaaggtctgcttaatatc
ccagaaatactccggctgctggaatctggctataatatcacactagtggagagaagctgc
tgcgagtctctgaaactcttcggaagcgcagagcgctacgtggtgatcacagttgacgag
cacactgctgtagtcgtgcaggacctagaagaattatattatgagaaggcatcagacaat
atcattatgagattaatggtgttgtcattccagtatagctgttgttggataatactgtat
cccaaggaaacattaaattcagagtaccatctcacaccaaagacactccatcacctcgcg
cagatttatgcagccttggtttcctctggtcttaaatctgaagaattggatgtaaagctt
ataatcgccccaggagtagaagagactgccttaacaattcgccagattgcagaccacaat
ctaatggcgtccaagagagatcctcatgagtggttggataaatcctgggttgaagtttca
ccatctaaggaagaaatgcacctgcttgattttccgtgcatcaaccccctggtggctcag
ctcatgctgcatcgagcgccttcgctgcactggctgttgatagcatcgcccgctgagctt
caggaactcctgccccaggttccagtcaaagtcctgaagcatttttgtagcatcacttcc
ttgttcaagattagttcttcctccatgacaaagtcacctcgaatttcatcacttcaggaa
gatatgaatcaaactcgtccctttatttctcagagctcagctcctgtcattcaagaacac
gatgaatattattcctacgaagacccggaagagatggtgcaggaaggcacaagcgctcct
tttatggagctaagagagagcatctgcaggccgccatctgcagcatctcacaggcaggcc
ggctcctggaacacagcgtggaataacccttttctaagtcataaggacccaaaaaaagca
tcttggcactcctttccaaaccagggtgattcggaatcaggtgtcttttctttgggccta
acacacataaattatgaacccgaaatgttaccaactgatactcagaggagaattactcat
aattttgtgaattatcctagagccaaaggaagcagaagtatgcaagcgtccagccccatg
tttttaccagaggactctccctcccatctttattgggactttaagaaaaatactgatcaa
aaacagatgtattcattcaggtcaagctgtggaacagagcagaccacctacaacaaatgg
tgccctcaagaagatgacttaaccagtgatcagccagagtgtctgtcagctgaactggaa
gatctcacacacagacattcaaatgctgggactgaccagactttctggagagaacagcca
tctgctcccagctgggattcagtctatgcttctgattctaatgtaaaccaaagaggattc
catggccttgatttctaccacagagctgggaactactcaggacagagaaggctgcctgtg
tcctcatctaactggaaagactatgaaacaccaacaggcttaatgtactcacaagtacca
caacccaaaaaacggcgtctaatgtatgaaaaagtccctggaagaatggacgggcaaact
cggctgaggtttttatga
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