Microtus oregoni (creeping vole): 121452197
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Entry
121452197 CDS
T08307
Symbol
Prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121452197 (Prpf39)
Spliceosome [BR:
morg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121452197 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_MalT
TPR_16
ANAPC5
Motif
Other DBs
NCBI-GeneID:
121452197
NCBI-ProteinID:
XP_041514041
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MQNSHMDEYRNSDNGSAGNSSEVVVVEHPDFSTEIMNVTEMEQSPDGSPSVNASTEENEM
AAAVDLPVTETEGNFPPEFEKFWKTVETNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSSIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLDF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPM
AHMLWAAFEEQQGNINEARTILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KTAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSCDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
TLKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYY
PPPPT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaactctgataatggcagcgcaggcaacagt
tcagaggtagtagtagtagagcatccagattttagtactgagattatgaacgttacggag
atggaacaatcacctgatggctctcccagcgtgaacgcatctacagaagaaaatgaaatg
gcagctgctgtggaccttccagtgacagaaacagaaggaaacttccctccagaatttgaa
aagttttggaaaacagtagaaactaatcctcaggattttacgggctgggtatatttgctt
cagtacgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttc
atacactacccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacac
gacaacattaaacaatcagatgaggtttatcgacgggggcttcaggcaatacctcttagt
gttgatctttggatacattatataaacttcttaaaagaaacactggaccctggtgatcct
gagacaaacagttcaataagaggaacttttgagcatgctgttctagctgcaggaacagat
ttccgatctgataaactgtgggaaatgtatataaactgggaaaatgaacagggaaatctg
agagaagttacagctgtatacgaccgcattcttggtatcccaacgcagttgtacagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctagagatcttttaactggt
gaacagttcattcagctcagaagggaattagcttctgtaaatggacacagtggtgatgat
ggacctcctggtgatgaccttccatcaggaattgaagacatcactgatccagcaaagcta
attactgaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tacaacgagcatgaagttagtaagaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaagcccaactgaaaaactggaaagaatacttagacttc
gaaattgaaaatgggactcatgaaagagttgtggttctctttgaaagatgtgtcatatct
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcacgtcttcagcagagcttgtactgttcaccttccaaagaaacccatg
gcacatatgctttgggcagcttttgaggagcagcaggggaacattaatgaagccaggact
atcttgaggacatttgaagaatgtgttctaggattggcaatggttcgattgagaagagta
agtttagaacgacgacatggaaatatggaagaagctgaacatttgcttcaagatgctata
aagactgccaaatcaaataatgagtcatcattttacgctattaaactagcccgacatctt
ttcaaaatacaaaaaaatcttccaaaatcaagaaaggtacttttggaagcaatcgaaaga
gataaggagaacacaaagttatacctcaatttacttgaaatggaatacagttgtgacctc
aaacaaaatgaagaaaatatcctcaattgctttgacaaggccatacatggttcattgcct
attaaaatgaggattacattttcccaaagaaaagtggaattccttgaagattttggttca
gatgttaataagcttctgaatgcatatgatgaacatcaaacactcctaaaagagcaggac
accttaaaaaggaaagctgaaaatggttctgaagaaccagaagaaaagaaagcacacacg
gaagatatgtcatctgcacagatcattgatggggatttacaggcaaatcaagctgcatat
aattacagtgcctggtatcagtacaattatcagaatccttggaattatggacagtattat
cctccacctccaacatga
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