Microtus oregoni (creeping vole): 121452926
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Entry
121452926 CDS
T08307
Symbol
Pabpc4l
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03015
mRNA surveillance pathway
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121452926 (Pabpc4l)
09123 Folding, sorting and degradation
03018 RNA degradation
121452926 (Pabpc4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121452926 (Pabpc4l)
03041 Spliceosome [BR:
morg03041
]
121452926 (Pabpc4l)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121452926 (Pabpc4l)
mRNA cycle factors
Stress granule specific factors
121452926 (Pabpc4l)
Spliceosome [BR:
morg03041
]
Complex C
Other components
Complex C specific factors
121452926 (Pabpc4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_7
RRM_Nup35
RRM_occluded
RRM_10
RRM_MARF1
RRM_3
RB_A
Motif
Other DBs
NCBI-GeneID:
121452926
NCBI-ProteinID:
XP_041515274
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSVEAKYRAASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQ
LDDAQKALDTMNFDLVQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSP
FGKILSSKVMSDEEGSRGYGFVHYQDQSAADKAIEEMNGKLLRDCSVFVARFKSRKDREA
ELRSKTSEFTNVYIKNFGDDMDDERLKEVFSKYGQTLSVKVMKDADGKSKGFGFVSFYSH
EAAKNAVEEMNGQDINGQTIFVGRAQRKVERQAELKEKFEEMKKERIRARQAAKLYIKNL
DDTIDDETLRKEFSSFGSICRVKVMQEAGQSKGFGLICFFSPEAAAKAMTEMNGRVLGSK
PLNIALGQKH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaagccaagtaccgtgccgcatccctgtatgttggtgacctccacgaagat
gtcactgaggatgtgttgttcaggaagttcaacacagtgggacccgtgttgtccatccgc
atctgcagggacctggtgtcccgtcgttccctaggctatgcctatgtcaattttctccag
ctggatgatgcccagaaagccctagacaccatgaactttgatttggtccaaggcaaatcc
atacgtctcatgtggtctcaacgggatgcatacctgagaaaatcaggaatcgggaatgtg
tttattaagaatctggacaaatccattgataacaaaaccttatatgaacacttctcaccg
tttggaaagatcctgtcctccaaggtgatgagcgatgaagaaggttccaggggctatggc
tttgtgcactaccaggaccaaagtgcagcagacaaagccattgaggagatgaatgggaag
ctgctgagggactgctcagtgtttgtggccagattcaaaagccgcaaggatcgcgaggct
gaactcagaagcaaaaccagcgaattcactaatgtgtacatcaaaaactttggcgatgat
atggacgatgagcggcttaaggaagtgttcagcaaatacggccaaactttgagcgttaag
gtgatgaaggatgccgacggaaagtccaaaggcttcgggtttgtgagtttctatagtcac
gaagctgccaaaaatgcagttgaagaaatgaatggacaggatataaacgggcagaccatt
tttgtaggcagagctcagaggaaagtagaacgccaggctgagttaaaggaaaagtttgaa
gagatgaaaaaggaaagaatccgcgcacgccaagcggcgaagctctacattaagaacctg
gatgacaccatcgatgatgaaacactgcgcaaggaattttcgtcctttgggtccatttgc
agagttaaggtgatgcaggaagcagggcagagcaaagggtttggcttgatctgctttttt
tctcccgaggcagccgctaaagcaatgactgagatgaatggccgtgtcctgggctccaaa
cccctcaacattgccctgggtcagaagcactga
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